Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_F01
(1339 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 37 0.037
AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical ... 36 0.086
Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical pr... 34 0.26
Z70684-8|CAA94603.2| 360|Caenorhabditis elegans Hypothetical pr... 31 1.8
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 30 4.3
Z93389-5|CAI79177.1| 212|Caenorhabditis elegans Hypothetical pr... 29 7.4
Z81539-4|CAB04392.2| 208|Caenorhabditis elegans Hypothetical pr... 29 7.4
AL110500-21|CAI79283.1| 197|Caenorhabditis elegans Hypothetical... 29 7.4
AF100656-11|AAF99960.1| 115|Caenorhabditis elegans Hypothetical... 29 7.4
Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical pr... 29 9.8
X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomera... 29 9.8
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 36.7 bits (81), Expect = 0.037
Identities = 31/97 (31%), Positives = 38/97 (39%), Gaps = 8/97 (8%)
Frame = +2
Query: 854 KKKXXXXKKKKXXXXKXKKKKKXXXXXXXKKKKXGXXKKX*KK--------KKXXXKKKK 1009
KKK KKK K KKKK ++++ KK +K KK KKKK
Sbjct: 128 KKKQEEEDKKKEEEEKDKKKKDKKKEEDDEEEEQKDKKKKDEKNDDDDEEDKKKDKKKKK 187
Query: 1010 *XGGXEKNEXXXKKKXKKXXXEGGGPXXXXXXKKKKK 1120
E+ E KKK KK + KKKK
Sbjct: 188 DDNDEEEKEKDKKKKDKKKDDDDDEDENDKKKDKKKK 224
Score = 32.7 bits (71), Expect = 0.60
Identities = 25/89 (28%), Positives = 38/89 (42%)
Frame = +2
Query: 854 KKKXXXXKKKKXXXXKXKKKKKXXXXXXXKKKKXGXXKKX*KKKKXXXKKKK*XGGXEKN 1033
KKK + KK + KKK++ KKKK ++ ++++ KKKK + +
Sbjct: 119 KKKRKQMRDKKKQEEEDKKKEE---EEKDKKKKDKKKEEDDEEEEQKDKKKKDEKNDDDD 175
Query: 1034 EXXXKKKXKKXXXEGGGPXXXXXXKKKKK 1120
E KK KK + KKK K
Sbjct: 176 EEDKKKDKKKKKDDNDEEEKEKDKKKKDK 204
Score = 31.5 bits (68), Expect = 1.4
Identities = 30/90 (33%), Positives = 34/90 (37%), Gaps = 2/90 (2%)
Frame = +2
Query: 854 KKKXXXXKKKKXXXXKXKKKKKXXXXXXXKKKKXGXXKKX*KKKKXXXKKKK--*XGGXE 1027
K K KKK + KKK K KKKK + KK KKKK E
Sbjct: 258 KDKKKKDKKKNDDDEEDKKKDK-------KKKKDDDDDEDEDNKKKDKKKKKDDKDDEDE 310
Query: 1028 KNEXXXKKKXKKXXXEGGGPXXXXXXKKKK 1117
+ E KKK KK + KKKK
Sbjct: 311 EKEKDKKKKDKKKDDDDDDDEKEKKDKKKK 340
Score = 31.1 bits (67), Expect = 1.8
Identities = 27/88 (30%), Positives = 33/88 (37%)
Frame = +2
Query: 857 KKXXXXKKKKXXXXKXKKKKKXXXXXXXKKKKXGXXKKX*KKKKXXXKKKK*XGGXEKNE 1036
KK KKK + K+K K KKK + KK KKKK ++NE
Sbjct: 179 KKKDKKKKKDDNDEEEKEKDKKKKD----KKKDDDDDEDENDKKKDKKKKKDDKDDDENE 234
Query: 1037 XXXKKKXKKXXXEGGGPXXXXXXKKKKK 1120
KK KK + K KKK
Sbjct: 235 DDKKKDKKKKKDDKEKDDDDEEEKDKKK 262
Score = 30.3 bits (65), Expect = 3.2
Identities = 23/82 (28%), Positives = 30/82 (36%)
Frame = +2
Query: 875 KKKKXXXXKXKKKKKXXXXXXXKKKKXGXXKKX*KKKKXXXKKKK*XGGXEKNEXXXKKK 1054
KK K K+K KKKK ++ K KKKK +++E KK
Sbjct: 238 KKDKKKKKDDKEKDDDDEEEKDKKKKDKKKNDDDEEDKKKDKKKKKDDDDDEDEDNKKKD 297
Query: 1055 XKKXXXEGGGPXXXXXXKKKKK 1120
KK + KKKK
Sbjct: 298 KKKKKDDKDDEDEEKEKDKKKK 319
Score = 30.3 bits (65), Expect = 3.2
Identities = 26/94 (27%), Positives = 35/94 (37%), Gaps = 2/94 (2%)
Frame = +2
Query: 845 KXXKKKXXXXKKKKXXXXKXKKKKKXXXXXXXK--KKKXGXXKKX*KKKKXXXKKKK*XG 1018
K K+K +++K K KKK K KKK + K KKKK
Sbjct: 245 KDDKEKDDDDEEEKDKKKKDKKKNDDDEEDKKKDKKKKKDDDDDEDEDNKKKDKKKKKDD 304
Query: 1019 GXEKNEXXXKKKXKKXXXEGGGPXXXXXXKKKKK 1120
+++E K K KK + KK KK
Sbjct: 305 KDDEDEEKEKDKKKKDKKKDDDDDDDEKEKKDKK 338
Score = 29.9 bits (64), Expect = 4.3
Identities = 28/92 (30%), Positives = 33/92 (35%)
Frame = +2
Query: 845 KXXKKKXXXXKKKKXXXXKXKKKKKXXXXXXXKKKKXGXXKKX*KKKKXXXKKKK*XGGX 1024
K KKK K+K + K KKK K KK + KKK KK
Sbjct: 238 KKDKKKKKDDKEKDDDDEEEKDKKK-------KDKKKNDDDEEDKKKDKKKKKDDDDDED 290
Query: 1025 EKNEXXXKKKXKKXXXEGGGPXXXXXXKKKKK 1120
E N+ KKK K + KK KK
Sbjct: 291 EDNKKKDKKKKKDDKDDEDEEKEKDKKKKDKK 322
Score = 29.9 bits (64), Expect = 4.3
Identities = 26/89 (29%), Positives = 33/89 (37%)
Frame = +2
Query: 854 KKKXXXXKKKKXXXXKXKKKKKXXXXXXXKKKKXGXXKKX*KKKKXXXKKKK*XGGXEKN 1033
KKK KK KKK KKKK + +K+K KK K + +
Sbjct: 275 KKKDKKKKKDDDDDEDEDNKKK-----DKKKKKDDKDDEDEEKEKDKKKKDKKKDDDDDD 329
Query: 1034 EXXXKKKXKKXXXEGGGPXXXXXXKKKKK 1120
+ KK KK + KKKKK
Sbjct: 330 DEKEKKDKKKKDDKDDDEDEDKDDKKKKK 358
Score = 29.1 bits (62), Expect = 7.4
Identities = 30/102 (29%), Positives = 37/102 (36%), Gaps = 10/102 (9%)
Frame = +2
Query: 845 KXXKKKXXXXKKKKXXXXKXKKKKKXXXXXXXK---KKKXGXXKKX*KKK-------KXX 994
K KKK + + K KKKKK KKK KK K+K K
Sbjct: 201 KKDKKKDDDDDEDENDKKKDKKKKKDDKDDDENEDDKKKDKKKKKDDKEKDDDDEEEKDK 260
Query: 995 XKKKK*XGGXEKNEXXXKKKXKKXXXEGGGPXXXXXXKKKKK 1120
KK K ++ + KK KK + KKKKK
Sbjct: 261 KKKDKKKNDDDEEDKKKDKKKKKDDDDDEDEDNKKKDKKKKK 302
>AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical
protein F49H12.5 protein.
Length = 257
Score = 35.5 bits (78), Expect = 0.086
Identities = 26/73 (35%), Positives = 30/73 (41%)
Frame = +2
Query: 845 KXXKKKXXXXKKKKXXXXKXKKKKKXXXXXXXKKKKXGXXKKX*KKKKXXXKKKK*XGGX 1024
K +KK KKK + KK+KK KKK K KK K K KK
Sbjct: 184 KKVEKKEEKKDKKKDEKKEEKKEKKEDKKKDEKKKDKKKEDKKDKKDKKDKKDKK--DKK 241
Query: 1025 EKNEXXXKKKXKK 1063
EK + KK KK
Sbjct: 242 EKKDDKKSKKNKK 254
Score = 30.7 bits (66), Expect = 2.4
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +2
Query: 845 KXXKKKXXXXKKKKXXXXKXKKKKKXXXXXXXKKKKXGXXKKX*KKK---KXXXKKKK*X 1015
K KK+ ++KK + KK KK KK+K KK KKK K K KK
Sbjct: 172 KEEKKEEAKKEEKKVEKKEEKKDKKKDEKKEEKKEKKEDKKKDEKKKDKKKEDKKDKK-- 229
Query: 1016 GGXEKNEXXXKKKXK 1060
+K + KK+ K
Sbjct: 230 DKKDKKDKKDKKEKK 244
>Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical protein
T05D4.5 protein.
Length = 482
Score = 33.9 bits (74), Expect = 0.26
Identities = 27/74 (36%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Frame = +2
Query: 854 KKKXXXXKKKKXXXXKXKK---KKKXXXXXXXKKKKXGXXKK----X*KKKKXXXKKKK* 1012
K+K KKKK K KK +KK KKK G KK KKK +KKK
Sbjct: 400 KRKEEEEKKKKDAEEKKKKDAEEKKKKDAEDEKKKDAGDEKKKDAEDEKKKDAGDEKKKK 459
Query: 1013 XGGXEKNEXXXKKK 1054
G +K + +KK
Sbjct: 460 DAGEKKKKDAEEKK 473
Score = 32.7 bits (71), Expect = 0.60
Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +2
Query: 854 KKKXXXXKKKKXXXXKXKK--KKKXXXXXXXKKKKXGXXKKX*KKKKXXXKKKK*XGGXE 1027
KKK KKKK K KK + + +KKK +K KK KKKK G +
Sbjct: 408 KKKDAEEKKKKDAEEKKKKDAEDEKKKDAGDEKKKDAEDEK--KKDAGDEKKKKDAGEKK 465
Query: 1028 KNEXXXKKK 1054
K + KKK
Sbjct: 466 KKDAEEKKK 474
Score = 28.7 bits (61), Expect = 9.8
Identities = 22/70 (31%), Positives = 30/70 (42%)
Frame = +2
Query: 845 KXXKKKXXXXKKKKXXXXKXKKKKKXXXXXXXKKKKXGXXKKX*KKKKXXXKKKK*XGGX 1024
K KKK KKK K KKK K ++ ++ K+K+ KKKK
Sbjct: 359 KAEKKKIGAVKKKIKAEKKEDKKKPMGWMSTLKMER---DERRTKRKEEEEKKKKDAEEK 415
Query: 1025 EKNEXXXKKK 1054
+K + KKK
Sbjct: 416 KKKDAEEKKK 425
>Z70684-8|CAA94603.2| 360|Caenorhabditis elegans Hypothetical protein
F28D1.8 protein.
Length = 360
Score = 31.1 bits (67), Expect = 1.8
Identities = 20/53 (37%), Positives = 23/53 (43%)
Frame = +2
Query: 905 KKKKKXXXXXXXKKKKXGXXKKX*KKKKXXXKKKK*XGGXEKNEXXXKKKXKK 1063
K KKK KKKK G K KKK K+KK +K + K KK
Sbjct: 307 KGKKKKKTKKGGKKKKSGAGKGKGKKKSKVSKEKKGGKKVQKKKPASKPTKKK 359
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 29.9 bits (64), Expect = 4.3
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +2
Query: 854 KKKXXXXKKKKXXXXKXKKKKKXXXXXXXKKKKXGXXKKX*KKKKXXXKKKK*XGGXEKN 1033
KKK KK K +KK+K K+K+ ++ +KK+ K+K +
Sbjct: 292 KKKKVKKSKKSKKDKKKEKKEKKKSKKANKEKEERRARREQRKKERAELKRKINNRSDTE 351
Query: 1034 EXXXKKKXKK 1063
E +K+ +K
Sbjct: 352 EEWEEKQSEK 361
>Z93389-5|CAI79177.1| 212|Caenorhabditis elegans Hypothetical protein
T13F3.8 protein.
Length = 212
Score = 29.1 bits (62), Expect = 7.4
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +2
Query: 845 KXXKKKXXXXKKKKXXXXKXKKKKKXXXXXXXKKKKXGXXKKX*KKKKXXXKKKK*XGGX 1024
K ++K KK++ + K+++K +KKK G K+ + K+ KKK+
Sbjct: 96 KKEEEKKKEEKKEEEKKEEVKEEEKKDDSKRDEKKKDGEKKEDDENKEDNEKKKE----- 150
Query: 1025 EKNEXXXKKK 1054
EK E KK
Sbjct: 151 EKKEDEKPKK 160
>Z81539-4|CAB04392.2| 208|Caenorhabditis elegans Hypothetical
protein F46A8.6 protein.
Length = 208
Score = 29.1 bits (62), Expect = 7.4
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = +3
Query: 873 KKKKKXXXKKXKKKKXXXXXXXXKKKKXGXPKXXKKKKK 989
KKK K KK KK KKKK K +KKK
Sbjct: 72 KKKSKEPAKKKKKSADSSQKVSKKKKKSSKSKKSAEKKK 110
Score = 28.7 bits (61), Expect = 9.8
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = +2
Query: 899 KXKKKKKXXXXXXXKKKKXGXXKKX*KKKKXXXKKKK 1009
K KKKK KKK +K KKKK K KK
Sbjct: 68 KKSKKKKSKEPAKKKKKSADSSQKVSKKKKKSSKSKK 104
>AL110500-21|CAI79283.1| 197|Caenorhabditis elegans Hypothetical
protein Y87G2A.20 protein.
Length = 197
Score = 29.1 bits (62), Expect = 7.4
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +2
Query: 875 KKKKXXXXKXKKKKKXXXXXXXKKKKXGXXKKX*KKKKXXXKKKK*XGGXEKNEXXXKKK 1054
KK+K K KKK +KKK KK K +K K K+ E+++ K+
Sbjct: 53 KKRKERKKADKAKKKTKKDAAKRKKKSKDKKKKQKAQKKAEKPKQQPASEEEDDAGNDKE 112
>AF100656-11|AAF99960.1| 115|Caenorhabditis elegans Hypothetical
protein F49F1.12 protein.
Length = 115
Score = 29.1 bits (62), Expect = 7.4
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = +3
Query: 873 KKKKKXXXKKXKKKKXXXXXXXXKKKKXGXPKXXKKKKK 989
KKK K KK KK KKKK K +KKK
Sbjct: 9 KKKSKEPAKKKKKSADSSQKVSKKKKKSSKSKKSAEKKK 47
Score = 28.7 bits (61), Expect = 9.8
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = +2
Query: 899 KXKKKKKXXXXXXXKKKKXGXXKKX*KKKKXXXKKKK 1009
K KKKK KKK +K KKKK K KK
Sbjct: 5 KKSKKKKSKEPAKKKKKSADSSQKVSKKKKKSSKSKK 41
>Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical protein
M01E5.5a protein.
Length = 806
Score = 28.7 bits (61), Expect = 9.8
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = +2
Query: 854 KKKXXXXKKKKXXXXKXKKKKKXXXXXXXKKKKXGXXKKX*KKKKXXXKKKK*XGGXEKN 1033
K+K +KK+ K +K+KK K K+ + + KKK+ G EK+
Sbjct: 156 KRKEKERRKKEKREKKERKEKKRLEKENRKIKEEDDEDSDDEDDEKAKKKKRKSKGAEKS 215
Query: 1034 EXXXKKK 1054
+ KK
Sbjct: 216 KPSTSKK 222
>X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomerase
protein.
Length = 806
Score = 28.7 bits (61), Expect = 9.8
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = +2
Query: 854 KKKXXXXKKKKXXXXKXKKKKKXXXXXXXKKKKXGXXKKX*KKKKXXXKKKK*XGGXEKN 1033
K+K +KK+ K +K+KK K K+ + + KKK+ G EK+
Sbjct: 156 KRKEKERRKKEKREKKKRKEKKRLEKENRKIKEEDDEDSDDEDDEKAKKKKRKSKGAEKS 215
Query: 1034 EXXXKKK 1054
+ KK
Sbjct: 216 KPSTSKK 222
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,578,556
Number of Sequences: 27780
Number of extensions: 40393
Number of successful extensions: 439
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 241
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3756810758
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -