Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_E17
         (928 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        24   1.7  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        24   1.7  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        24   1.7  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   2.3  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   2.3  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    23   3.0  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   3.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   5.2  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 152 ASEWVDNLLLNTFFTALRQAFIFPDRHVQNNK 57
           A  W D +LLN    A+    + P+ H++N K
Sbjct: 339 ADWWKDIMLLNEKTLAVPAPPVLPENHLKNAK 370


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 152 ASEWVDNLLLNTFFTALRQAFIFPDRHVQNNK 57
           A  W D +LLN    A+    + P+ H++N K
Sbjct: 339 ADWWKDIMLLNEKTLAVPAPPVLPENHLKNAK 370


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 152 ASEWVDNLLLNTFFTALRQAFIFPDRHVQNNK 57
           A  W D +LLN    A+    + P+ H++N K
Sbjct: 339 ADWWKDIMLLNEKTLAVPAPPVLPENHLKNAK 370


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = -3

Query: 143 WVDNLLLNTFFTALRQAFIF 84
           +++++ LNT++  LRQAF F
Sbjct: 223 FIEDIGLNTYYFFLRQAFPF 242


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = -3

Query: 143 WVDNLLLNTFFTALRQAFIF 84
           +++++ LNT++  LRQAF F
Sbjct: 223 FIEDIGLNTYYFFLRQAFPF 242


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 621 LREVVNKLIPDSIAKGHREGLPWHLPSA 704
           + E+ N  +P S   G    LP HLP++
Sbjct: 359 MMEIPNVTLPTSTYSGSPTELPKHLPTS 386


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = +2

Query: 170 QGSVYVQQEASRHH--ACQPYPGNENCFG 250
           Q S+Y+QQ+  +HH  +   +  N+  FG
Sbjct: 94  QHSLYLQQQQQQHHQDSSSEHASNQERFG 122


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 334 LNLRKDLSASVSACRSARE 278
           LNLR D+S+S S+  S+ E
Sbjct: 365 LNLRTDISSSSSSISSSEE 383


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,130
Number of Sequences: 438
Number of extensions: 4709
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30234750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)