Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_E16
         (897 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41528-5|AAM51514.2|  389|Caenorhabditis elegans Hypothetical pr...    31   1.1  
DQ139948-1|ABA29469.1|  381|Caenorhabditis elegans putative prot...    31   1.1  
U58754-2|AAB00671.1|  391|Caenorhabditis elegans Hypothetical pr...    30   2.6  
Z81500-6|CAB04099.1|  221|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p...    29   3.4  
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp...    29   3.4  
Z81037-7|CAB02744.2|  431|Caenorhabditis elegans Hypothetical pr...    29   4.5  
U58756-4|AAC48082.1|  291|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z81494-14|CAJ43905.2|  745|Caenorhabditis elegans Hypothetical p...    28   7.9  
Z81494-8|CAB54212.3|  707|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z81057-7|CAJ43903.2|  745|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z68227-18|CAA92521.1|  869|Caenorhabditis elegans Hypothetical p...    28   7.9  
Z68220-11|CAA92493.1|  869|Caenorhabditis elegans Hypothetical p...    28   7.9  
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr...    28   7.9  
AC084153-4|AAK84598.2|  836|Caenorhabditis elegans Hypothetical ...    28   7.9  

>U41528-5|AAM51514.2|  389|Caenorhabditis elegans Hypothetical
           protein C15C7.7 protein.
          Length = 389

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -1

Query: 537 QAKKSWTACSACWVGSFSXKVANETDPYGYIIVVQCV 427
           +  K  T  S   V S+S   +NETDP GYI+   C+
Sbjct: 2   RVSKVLTLASFISVCSYSEAKSNETDPNGYIVFCPCM 38


>DQ139948-1|ABA29469.1|  381|Caenorhabditis elegans putative protein
           O-fucosyltransferase1 protein.
          Length = 381

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -1

Query: 537 QAKKSWTACSACWVGSFSXKVANETDPYGYIIVVQCV 427
           +  K  T  S   V S+S   +NETDP GYI+   C+
Sbjct: 2   RVSKVLTLASFISVCSYSEAKSNETDPNGYIVFCPCM 38


>U58754-2|AAB00671.1|  391|Caenorhabditis elegans Hypothetical
           protein C39H7.4 protein.
          Length = 391

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = -1

Query: 135 PRTPTIIETVQPTSLQPVLDLSECKSNNLNLKEFPISVDR 16
           P T  +I    P  + PVLD  E KS N  + E    VDR
Sbjct: 153 PATSAVIGLQPPRLITPVLDADESKSMNQLVPETTADVDR 192


>Z81500-6|CAB04099.1|  221|Caenorhabditis elegans Hypothetical
           protein F11D11.8 protein.
          Length = 221

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 12/61 (19%)
 Frame = +1

Query: 271 NDCFTDEECLLS-VNSLRQHHMR-------LAGFKDLGYSFVAGGNGKIYE----GAGWN 414
           ++CF D ECLL+  NS   H+          A +KD+ YS V   +G IY      AGW+
Sbjct: 48  DECFEDSECLLAFFNSACFHYYTELPDATCPASYKDIKYS-VTSDSGDIYSWKKTDAGWS 106

Query: 415 H 417
           +
Sbjct: 107 Y 107


>Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical protein
            K08F8.6 protein.
          Length = 2862

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 16/50 (32%), Positives = 20/50 (40%)
 Frame = +2

Query: 53   LLDLHSDKSKTGCKDVGCTVSIIVGVLGEFRNPECSVRMRRNSHHRMEWH 202
            LLDLH D     C    C+VSI    +G +  P   +      H  M  H
Sbjct: 1539 LLDLHFDSVFDACPICSCSVSIRSRDIGMYITPHTVLYSTERGHTNMREH 1588


>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
            protein K08F8.6 protein.
          Length = 2862

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 16/50 (32%), Positives = 20/50 (40%)
 Frame = +2

Query: 53   LLDLHSDKSKTGCKDVGCTVSIIVGVLGEFRNPECSVRMRRNSHHRMEWH 202
            LLDLH D     C    C+VSI    +G +  P   +      H  M  H
Sbjct: 1539 LLDLHFDSVFDACPICSCSVSIRSRDIGMYITPHTVLYSTERGHTNMREH 1588


>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
            subunit Med13 protein.
          Length = 2862

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 16/50 (32%), Positives = 20/50 (40%)
 Frame = +2

Query: 53   LLDLHSDKSKTGCKDVGCTVSIIVGVLGEFRNPECSVRMRRNSHHRMEWH 202
            LLDLH D     C    C+VSI    +G +  P   +      H  M  H
Sbjct: 1539 LLDLHFDSVFDACPICSCSVSIRSRDIGMYITPHTVLYSTERGHTNMREH 1588


>Z81037-7|CAB02744.2|  431|Caenorhabditis elegans Hypothetical
           protein C17E4.3 protein.
          Length = 431

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 214 RRDSVPLHSVMGISPHSDAAFRVPKLTKNTNNNRDGATN 98
           R DS+P+  V+GISP   A F       N  ++ D + N
Sbjct: 244 RNDSIPIEPVVGISPVLVANFNRTSPDSNNTHHHDESRN 282


>U58756-4|AAC48082.1|  291|Caenorhabditis elegans Hypothetical
           protein F58F9.6 protein.
          Length = 291

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = -1

Query: 183 WEFRRIRTLHSGFRNSPRTPTIIETVQPTSLQPVLDLSECKSNNLNLKEFPISVD 19
           WE  R R+  SG      T + +ET      + ++D+S+    NL  K FP+SVD
Sbjct: 142 WE--RTRSCLSGTAGCQCTGSTVETSNKCPCRAMIDVSDKVKRNL--KTFPLSVD 192


>Z81494-14|CAJ43905.2|  745|Caenorhabditis elegans Hypothetical
           protein F02E9.9b protein.
          Length = 745

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 62  LHSDKSKTGCKDVGCTVSIIVGVLGEFRNP 151
           LH D S+   KDVG  V   +G +  +R+P
Sbjct: 321 LHKDGSRYWIKDVGPAVESYIGFIENYRDP 350


>Z81494-8|CAB54212.3|  707|Caenorhabditis elegans Hypothetical
           protein F02E9.9a protein.
          Length = 707

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 62  LHSDKSKTGCKDVGCTVSIIVGVLGEFRNP 151
           LH D S+   KDVG  V   +G +  +R+P
Sbjct: 283 LHKDGSRYWIKDVGPAVESYIGFIENYRDP 312


>Z81057-7|CAJ43903.2|  745|Caenorhabditis elegans Hypothetical
           protein F02E9.9b protein.
          Length = 745

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 62  LHSDKSKTGCKDVGCTVSIIVGVLGEFRNP 151
           LH D S+   KDVG  V   +G +  +R+P
Sbjct: 321 LHKDGSRYWIKDVGPAVESYIGFIENYRDP 350


>Z68227-18|CAA92521.1|  869|Caenorhabditis elegans Hypothetical
           protein F49C12.15 protein.
          Length = 869

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -1

Query: 141 NSPRTPTIIETVQPTSLQPVLDLSECKSNNLNLKEFPISVD 19
           +SP TPT+  T   T    ++ LS  K  +  L+  PI V+
Sbjct: 732 SSPATPTLKRTFNQTDESNIVTLSAVKETHQTLEMTPIKVN 772


>Z68220-11|CAA92493.1|  869|Caenorhabditis elegans Hypothetical
           protein F49C12.15 protein.
          Length = 869

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -1

Query: 141 NSPRTPTIIETVQPTSLQPVLDLSECKSNNLNLKEFPISVD 19
           +SP TPT+  T   T    ++ LS  K  +  L+  PI V+
Sbjct: 732 SSPATPTLKRTFNQTDESNIVTLSAVKETHQTLEMTPIKVN 772


>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
            F47A4.2 protein.
          Length = 3498

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -1

Query: 681  PSTFRALSSQWGQLSISDCSTAPGLSVFINC 589
            P  F+ +S Q   + ISDCST   L+ FI C
Sbjct: 1489 PYPFKEMSQQ---IDISDCSTHYSLTTFITC 1516


>AC084153-4|AAK84598.2|  836|Caenorhabditis elegans Hypothetical
           protein Y22D7AL.9 protein.
          Length = 836

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 12/59 (20%), Positives = 29/59 (49%)
 Frame = +1

Query: 196 VARSHVVNSPXKSPIDLVVIQHTVSNDCFTDEECLLSVNSLRQHHMRLAGFKDLGYSFV 372
           +AR+ +  +  +  +  V     ++ DC  +E+  +S   + + + ++ GF D+   FV
Sbjct: 658 LARAELERNNTEIALSAVEKSINLAEDCENNEKLAISCRLIAEIYQKIGGFNDISIQFV 716


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,950,878
Number of Sequences: 27780
Number of extensions: 384737
Number of successful extensions: 893
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)