Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_E16
         (897 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            24   1.6  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   2.9  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   6.6  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   8.7  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -1

Query: 168 IRTLHSGFRNSPRTPTIIETVQPTSLQPVLD 76
           +RT++S  RN  RT       QP   Q V+D
Sbjct: 217 LRTIYSRVRNLNRTHGFPNDAQPYIFQEVID 247


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = -1

Query: 609 LSVFINCW*PTTW*SSVNKLFSTPQAKKSWTACSACWVG 493
           +S FI CW P    + V      P A  ++ +    W+G
Sbjct: 378 MSAFIVCWLPFFVLALVRPFLKNPDAIPAFLSSLFLWLG 416


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -1

Query: 405 RSFINFSVASSHE*IAQVLE 346
           RSF+ FS+  S + +A+V++
Sbjct: 296 RSFVPFSIERSSQSVAEVMD 315


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
 Frame = -1

Query: 147 FRNSPRTPTIIETVQPT-SLQP--VLDLSECKSNNLN----LKEFPISVDRXLE 7
           FRN+P     I T QP+  L+P    D++E  ++ +N    L + P + ++ LE
Sbjct: 100 FRNTPEVHQAINTCQPSIPLEPDFTSDVTERDNHLVNAFKTLTQEPKNTNKFLE 153


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,454
Number of Sequences: 438
Number of extensions: 5138
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)