Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_E12
(982 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1641 + 34993807-34994589,34994924-34995022,34995521-349956... 36 0.065
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 33 0.46
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.9
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 30 3.2
01_02_0031 + 10364487-10365407 30 3.2
05_06_0026 - 25024807-25025300,25025432-25025495,25025567-250256... 29 4.3
04_03_0904 + 20717005-20718087 29 4.3
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 29 5.7
05_01_0380 + 2978256-2979284 29 5.7
04_04_1027 - 30216859-30217212,30218769-30219178,30219395-30219800 29 5.7
03_01_0515 - 3864796-3865425 29 7.5
02_04_0056 + 19313422-19313967,19314035-19314168,19314263-193143... 29 7.5
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 28 9.9
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090... 28 9.9
>04_04_1641 +
34993807-34994589,34994924-34995022,34995521-34995648,
34996095-34996235,34996456-34996542,34996627-34996780,
34998569-34998628,34999019-34999447,34999524-34999819,
35000278-35000407,35000690-35001187
Length = 934
Score = 35.5 bits (78), Expect = 0.065
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +3
Query: 165 PXSXLLSAXSYXXEXXPPXPPXXXPXPXPXPXPXRPA 275
P L SA + PP PP P P P P P RP+
Sbjct: 23 PFKPLSSAAPFRRPSPPPPPPSPVPSPAPPPPPHRPS 59
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 32.7 bits (71), Expect = 0.46
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 213 PPXPPXXXPXPXPXPXPXRPAXP 281
PP PP P P P P P RP P
Sbjct: 354 PPPPPPPPPPPPPPPPPPRPPPP 376
Score = 31.9 bits (69), Expect = 0.80
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +3
Query: 213 PPXPPXXXPXPXPXPXPXRPAXPRXLAAXXXXXPK 317
PP PP P P P P P P P A PK
Sbjct: 357 PPPPPPPPPPPPPPPRPPPPPPPIKKGAPPPAPPK 391
Score = 29.9 bits (64), Expect = 3.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 213 PPXPPXXXPXPXPXPXPXRPAXP 281
PP PP P P P P P P P
Sbjct: 355 PPPPPPPPPPPPPPPPPRPPPPP 377
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/46 (30%), Positives = 16/46 (34%)
Frame = +3
Query: 213 PPXPPXXXPXPXPXPXPXRPAXPRXLAAXXXXXPKGXXXXKXXPXP 350
PP PP P P P P P P+ + P G P P
Sbjct: 337 PPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPP 382
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/55 (27%), Positives = 17/55 (30%)
Frame = +3
Query: 216 PXPPXXXPXPXPXPXPXRPAXPRXLAAXXXXXPKGXXXXKXXPXPXXXXXXKSXP 380
P PP P P P P P P + P G P P +S P
Sbjct: 267 PPPPQVPPPPPQAPPPPPPNAPMGMPPRIPPPPVGGTQPPPPPPPLANGPPRSIP 321
>01_02_0031 + 10364487-10365407
Length = 306
Score = 29.9 bits (64), Expect = 3.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 213 PPXPPXXXPXPXPXPXPXRPAXP 281
PP PP P P P P P P P
Sbjct: 171 PPPPPPALPAPPPPPAPMLPLAP 193
>05_06_0026 -
25024807-25025300,25025432-25025495,25025567-25025662,
25025719-25025929,25026616-25026690,25026820-25027037
Length = 385
Score = 29.5 bits (63), Expect = 4.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 213 PPXPPXXXPXPXPXPXPXRPA 275
PP PP P P P P P PA
Sbjct: 18 PPPPPVQVPVPPPPPPPLPPA 38
>04_03_0904 + 20717005-20718087
Length = 360
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +3
Query: 165 PXSXLLSAXSYXXEXXPPXPPXXXPXPXPXPXP-XRPAXP 281
P + + SY + P PP P P P P P +PA P
Sbjct: 208 PYTPTPTPPSYKPQPKPNPPPTYKPQPKPNPPPTYKPAPP 247
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 29.1 bits (62), Expect = 5.7
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +3
Query: 183 SAXSYXXEXXPPXPPXXXPXPXPXPXPXRPAXP 281
SA + PP PP P P P P +P P
Sbjct: 604 SATANTASALPPPPPRPPGAPPPPPPPGKPGGP 636
Score = 28.3 bits (60), Expect = 9.9
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 213 PPXPPXXXPXPXPXPXPXRPAXPRXLA 293
PP PP P P P P + PR LA
Sbjct: 625 PPPPPPGKPGGPPPPPPRPGSLPRNLA 651
>05_01_0380 + 2978256-2979284
Length = 342
Score = 29.1 bits (62), Expect = 5.7
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 213 PPXPPXXXPXPXPXPXPXRPAXP 281
PP PP P P P P +P+ P
Sbjct: 29 PPPPPPPPPPPPPRPFSRKPSEP 51
>04_04_1027 - 30216859-30217212,30218769-30219178,30219395-30219800
Length = 389
Score = 29.1 bits (62), Expect = 5.7
Identities = 13/42 (30%), Positives = 16/42 (38%)
Frame = +3
Query: 165 PXSXLLSAXSYXXEXXPPXPPXXXPXPXPXPXPXRPAXPRXL 290
P +A + + PP P P P P P P PR L
Sbjct: 3 PNDAFSAAHPFRWDLGPPAPAPVPPPPPPPPPPPPANVPREL 44
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.7 bits (61), Expect = 7.5
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +3
Query: 213 PPXPPXXXPXPXPXPXPXRPAXPRXLAAXXXXXPKGXXXXKXXPXP 350
PP PP P P P P P P P K P P
Sbjct: 73 PPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPP 118
>02_04_0056 +
19313422-19313967,19314035-19314168,19314263-19314398,
19314870-19314923,19314995-19315135,19315220-19315546,
19315647-19315916,19316080-19316226,19316890-19317045,
19317223-19317290,19318210-19318309,19318696-19318985,
19319074-19319274,19319840-19319902,19320263-19320356,
19320964-19321035,19321979-19322077,19322254-19322376
Length = 1006
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 213 PPXPPXXXPXPXPXPXPXRPAXP 281
PP PP P P P P +P P
Sbjct: 52 PPPPPPPSPSPSPSPPAGKPTKP 74
>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 28.3 bits (60), Expect = 9.9
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 213 PPXPPXXXPXPXPXPXPXRPAXPRXLA 293
PP PP P P P P + PR LA
Sbjct: 930 PPPPPPGKPGGPPPPPPPPGSLPRNLA 956
>09_06_0107 +
20907560-20908491,20908511-20908625,20908967-20909058,
20909293-20909556,20910714-20911494
Length = 727
Score = 28.3 bits (60), Expect = 9.9
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 213 PPXPPXXXPXPXPXPXPXRP 272
PP PP P P P P P P
Sbjct: 79 PPSPPPPPPPPPPPPPPLSP 98
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,290,189
Number of Sequences: 37544
Number of extensions: 152393
Number of successful extensions: 1757
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1268
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2858396560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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