Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_E09
         (949 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC543.05c |||inorganic anion exchanger |Schizosaccharomyces po...    27   2.9  
SPCC757.07c |ctt1|cta1|catalase|Schizosaccharomyces pombe|chr 3|...    27   3.9  

>SPBC543.05c |||inorganic anion exchanger |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 517

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 157 MATNTIFVKYIFKTTCGLYGFYT*IIHL 74
           +A    FVK+I K +C ++G Y   I+L
Sbjct: 140 IANGVYFVKHITKFSCEIFGLYVAFIYL 167


>SPCC757.07c |ctt1|cta1|catalase|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 512

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = -3

Query: 251 LMIESRTL*PTPFKLFKKVPSGSTAHNH-YANDGDKYYFCKIHF 123
           +MI    L  TP+    +   G ++H + + ND  ++Y+CK HF
Sbjct: 181 VMILFSDLGGTPYSY--RFMDGFSSHTYKFVNDKGEFYYCKWHF 222


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,128,525
Number of Sequences: 5004
Number of extensions: 31284
Number of successful extensions: 65
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 483319012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)