Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_E07
(890 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X68836-1|CAA48726.1| 395|Homo sapiens S-adenosylmethionine synt... 321 2e-87
DQ083239-1|AAY85355.1| 395|Homo sapiens methionine adenosyltran... 321 2e-87
BC001854-1|AAH01854.1| 395|Homo sapiens methionine adenosyltran... 321 2e-87
BC001686-1|AAH01686.1| 395|Homo sapiens methionine adenosyltran... 321 2e-87
AC016753-1|AAY24339.1| 395|Homo sapiens unknown protein. 321 2e-87
X69078-1|CAA48822.1| 395|Homo sapiens methionine adenosyltransf... 307 3e-83
D49357-1|BAA08355.1| 395|Homo sapiens S-adenosylmethionine synt... 307 3e-83
BC018359-1|AAH18359.1| 395|Homo sapiens methionine adenosyltran... 307 3e-83
AL359195-2|CAI13695.1| 395|Homo sapiens methionine adenosyltran... 307 3e-83
AL359195-3|CAI13696.1| 145|Homo sapiens methionine adenosyltran... 158 3e-38
AK222852-1|BAD96572.1| 565|Homo sapiens ubiquitin specific prot... 33 1.8
BC067273-1|AAH67273.1| 565|Homo sapiens USP39 protein protein. 32 2.4
BC001384-1|AAH01384.2| 562|Homo sapiens USP39 protein protein. 32 2.4
AF353989-1|AAK49524.1| 565|Homo sapiens U4/U6.U5 tri-snRNP-asso... 32 2.4
BC028352-1|AAH28352.1| 691|Homo sapiens TBC1 domain family, mem... 30 9.8
>X68836-1|CAA48726.1| 395|Homo sapiens S-adenosylmethionine
synthetase protein.
Length = 395
Score = 321 bits (789), Expect = 2e-87
Identities = 154/203 (75%), Positives = 176/203 (86%), Gaps = 1/203 (0%)
Frame = +3
Query: 138 MNGYAKTNG-HSYDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACE 314
MNG + NG H +E+G+ FLFTSESVGEGHPDK+CDQISDA+LDAHL QDPDAKVACE
Sbjct: 1 MNG--QLNGFHEAFIEEGT-FLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACE 57
Query: 315 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDWRTLNLLVAIEEQSPNI 494
T+ KTGM+LL GEITS+A VDYQKVVRE VKHIGYDDSSKGFD++T N+LVA+E+QSP+I
Sbjct: 58 TVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDI 117
Query: 495 AEGVYLDREEIDIGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWAR 674
A+GV+LDR E DIGAGDQGLMFGYATDETEECMPLT+VLAHKLN K+AELRRNG W R
Sbjct: 118 AQGVHLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLR 177
Query: 675 PDSKTQVTCEYVFAGGAXVPQRV 743
PDSKTQVT +Y+ GA +P RV
Sbjct: 178 PDSKTQVTVQYMQDRGAVLPIRV 200
Score = 37.1 bits (82), Expect = 0.085
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 731 PTESHTVXVSLQHSEXXXXRLAR*D-QRXVIKEVIPXQYLDERTVIPXNPCXPF 889
P HT+ +S+QH E R + VIK V+P +YLDE T+ P F
Sbjct: 197 PIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRF 250
>DQ083239-1|AAY85355.1| 395|Homo sapiens methionine
adenosyltransferase II protein.
Length = 395
Score = 321 bits (789), Expect = 2e-87
Identities = 154/203 (75%), Positives = 176/203 (86%), Gaps = 1/203 (0%)
Frame = +3
Query: 138 MNGYAKTNG-HSYDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACE 314
MNG + NG H +E+G+ FLFTSESVGEGHPDK+CDQISDA+LDAHL QDPDAKVACE
Sbjct: 1 MNG--QLNGFHEAFIEEGT-FLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACE 57
Query: 315 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDWRTLNLLVAIEEQSPNI 494
T+ KTGM+LL GEITS+A VDYQKVVRE VKHIGYDDSSKGFD++T N+LVA+E+QSP+I
Sbjct: 58 TVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDI 117
Query: 495 AEGVYLDREEIDIGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWAR 674
A+GV+LDR E DIGAGDQGLMFGYATDETEECMPLT+VLAHKLN K+AELRRNG W R
Sbjct: 118 AQGVHLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLR 177
Query: 675 PDSKTQVTCEYVFAGGAXVPQRV 743
PDSKTQVT +Y+ GA +P RV
Sbjct: 178 PDSKTQVTVQYMQDRGAVLPIRV 200
Score = 37.1 bits (82), Expect = 0.085
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 731 PTESHTVXVSLQHSEXXXXRLAR*D-QRXVIKEVIPXQYLDERTVIPXNPCXPF 889
P HT+ +S+QH E R + VIK V+P +YLDE T+ P F
Sbjct: 197 PIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRF 250
>BC001854-1|AAH01854.1| 395|Homo sapiens methionine
adenosyltransferase II, alpha protein.
Length = 395
Score = 321 bits (789), Expect = 2e-87
Identities = 154/203 (75%), Positives = 176/203 (86%), Gaps = 1/203 (0%)
Frame = +3
Query: 138 MNGYAKTNG-HSYDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACE 314
MNG + NG H +E+G+ FLFTSESVGEGHPDK+CDQISDA+LDAHL QDPDAKVACE
Sbjct: 1 MNG--QLNGFHEAFIEEGT-FLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACE 57
Query: 315 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDWRTLNLLVAIEEQSPNI 494
T+ KTGM+LL GEITS+A VDYQKVVRE VKHIGYDDSSKGFD++T N+LVA+E+QSP+I
Sbjct: 58 TVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDI 117
Query: 495 AEGVYLDREEIDIGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWAR 674
A+GV+LDR E DIGAGDQGLMFGYATDETEECMPLT+VLAHKLN K+AELRRNG W R
Sbjct: 118 AQGVHLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLR 177
Query: 675 PDSKTQVTCEYVFAGGAXVPQRV 743
PDSKTQVT +Y+ GA +P RV
Sbjct: 178 PDSKTQVTVQYMQDRGAVLPIRV 200
Score = 37.1 bits (82), Expect = 0.085
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 731 PTESHTVXVSLQHSEXXXXRLAR*D-QRXVIKEVIPXQYLDERTVIPXNPCXPF 889
P HT+ +S+QH E R + VIK V+P +YLDE T+ P F
Sbjct: 197 PIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRF 250
>BC001686-1|AAH01686.1| 395|Homo sapiens methionine
adenosyltransferase II, alpha protein.
Length = 395
Score = 321 bits (789), Expect = 2e-87
Identities = 154/203 (75%), Positives = 176/203 (86%), Gaps = 1/203 (0%)
Frame = +3
Query: 138 MNGYAKTNG-HSYDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACE 314
MNG + NG H +E+G+ FLFTSESVGEGHPDK+CDQISDA+LDAHL QDPDAKVACE
Sbjct: 1 MNG--QLNGFHEAFIEEGT-FLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACE 57
Query: 315 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDWRTLNLLVAIEEQSPNI 494
T+ KTGM+LL GEITS+A VDYQKVVRE VKHIGYDDSSKGFD++T N+LVA+E+QSP+I
Sbjct: 58 TVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDI 117
Query: 495 AEGVYLDREEIDIGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWAR 674
A+GV+LDR E DIGAGDQGLMFGYATDETEECMPLT+VLAHKLN K+AELRRNG W R
Sbjct: 118 AQGVHLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLR 177
Query: 675 PDSKTQVTCEYVFAGGAXVPQRV 743
PDSKTQVT +Y+ GA +P RV
Sbjct: 178 PDSKTQVTVQYMQDRGAVLPIRV 200
Score = 37.1 bits (82), Expect = 0.085
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 731 PTESHTVXVSLQHSEXXXXRLAR*D-QRXVIKEVIPXQYLDERTVIPXNPCXPF 889
P HT+ +S+QH E R + VIK V+P +YLDE T+ P F
Sbjct: 197 PIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRF 250
>AC016753-1|AAY24339.1| 395|Homo sapiens unknown protein.
Length = 395
Score = 321 bits (789), Expect = 2e-87
Identities = 154/203 (75%), Positives = 176/203 (86%), Gaps = 1/203 (0%)
Frame = +3
Query: 138 MNGYAKTNG-HSYDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACE 314
MNG + NG H +E+G+ FLFTSESVGEGHPDK+CDQISDA+LDAHL QDPDAKVACE
Sbjct: 1 MNG--QLNGFHEAFIEEGT-FLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACE 57
Query: 315 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDWRTLNLLVAIEEQSPNI 494
T+ KTGM+LL GEITS+A VDYQKVVRE VKHIGYDDSSKGFD++T N+LVA+E+QSP+I
Sbjct: 58 TVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDI 117
Query: 495 AEGVYLDREEIDIGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWAR 674
A+GV+LDR E DIGAGDQGLMFGYATDETEECMPLT+VLAHKLN K+AELRRNG W R
Sbjct: 118 AQGVHLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLR 177
Query: 675 PDSKTQVTCEYVFAGGAXVPQRV 743
PDSKTQVT +Y+ GA +P RV
Sbjct: 178 PDSKTQVTVQYMQDRGAVLPIRV 200
Score = 37.1 bits (82), Expect = 0.085
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 731 PTESHTVXVSLQHSEXXXXRLAR*D-QRXVIKEVIPXQYLDERTVIPXNPCXPF 889
P HT+ +S+QH E R + VIK V+P +YLDE T+ P F
Sbjct: 197 PIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRF 250
>X69078-1|CAA48822.1| 395|Homo sapiens methionine
adenosyltransferase protein.
Length = 395
Score = 307 bits (754), Expect = 3e-83
Identities = 138/191 (72%), Positives = 169/191 (88%)
Frame = +3
Query: 171 YDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCG 350
+ + +G VF+FTSESVGEGHPDK+CDQISDA+LDAHL QDP+AKVACET+ KTGMVLLCG
Sbjct: 11 HSLSEG-VFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCG 69
Query: 351 EITSKANVDYQKVVRETVKHIGYDDSSKGFDWRTLNLLVAIEEQSPNIAEGVYLDREEID 530
EITS A VDYQ+VVR+T+KHIGYDDS+KGFD++T N+LVA+E+QSP+IA+ V+LDR E D
Sbjct: 70 EITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLDRNEED 129
Query: 531 IGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYV 710
+GAGDQGLMFGYATDETEECMPLT++LAHKLN ++A+LRR+G W RPDSKTQVT +Y+
Sbjct: 130 VGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQVTVQYM 189
Query: 711 FAGGAXVPQRV 743
GA +P R+
Sbjct: 190 QDNGAVIPVRI 200
Score = 39.1 bits (87), Expect = 0.021
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 731 PTESHTVXVSLQHSEXXXXR-LAR*DQRXVIKEVIPXQYLDERTVIPXNPCXPF 889
P HT+ +S+QH+E + R + VI+ V+P +YLDE TV P F
Sbjct: 197 PVRIHTIVISVQHNEDITLEEMRRALKEQVIRAVVPAKYLDEDTVYHLQPSGRF 250
>D49357-1|BAA08355.1| 395|Homo sapiens S-adenosylmethionine
synthetase protein.
Length = 395
Score = 307 bits (754), Expect = 3e-83
Identities = 138/191 (72%), Positives = 169/191 (88%)
Frame = +3
Query: 171 YDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCG 350
+ + +G VF+FTSESVGEGHPDK+CDQISDA+LDAHL QDP+AKVACET+ KTGMVLLCG
Sbjct: 11 HSLSEG-VFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCG 69
Query: 351 EITSKANVDYQKVVRETVKHIGYDDSSKGFDWRTLNLLVAIEEQSPNIAEGVYLDREEID 530
EITS A VDYQ+VVR+T+KHIGYDDS+KGFD++T N+LVA+E+QSP+IA+ V+LDR E D
Sbjct: 70 EITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLDRNEED 129
Query: 531 IGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYV 710
+GAGDQGLMFGYATDETEECMPLT++LAHKLN ++A+LRR+G W RPDSKTQVT +Y+
Sbjct: 130 VGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQVTVQYM 189
Query: 711 FAGGAXVPQRV 743
GA +P R+
Sbjct: 190 QDNGAVIPVRI 200
Score = 39.1 bits (87), Expect = 0.021
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 731 PTESHTVXVSLQHSEXXXXR-LAR*DQRXVIKEVIPXQYLDERTVIPXNPCXPF 889
P HT+ +S+QH+E + R + VI+ V+P +YLDE TV P F
Sbjct: 197 PVRIHTIVISVQHNEDITLEEMRRALKEQVIRAVVPAKYLDEDTVYHLQPSGRF 250
>BC018359-1|AAH18359.1| 395|Homo sapiens methionine
adenosyltransferase I, alpha protein.
Length = 395
Score = 307 bits (754), Expect = 3e-83
Identities = 138/191 (72%), Positives = 169/191 (88%)
Frame = +3
Query: 171 YDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCG 350
+ + +G VF+FTSESVGEGHPDK+CDQISDA+LDAHL QDP+AKVACET+ KTGMVLLCG
Sbjct: 11 HSLSEG-VFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCG 69
Query: 351 EITSKANVDYQKVVRETVKHIGYDDSSKGFDWRTLNLLVAIEEQSPNIAEGVYLDREEID 530
EITS A VDYQ+VVR+T+KHIGYDDS+KGFD++T N+LVA+E+QSP+IA+ V+LDR E D
Sbjct: 70 EITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLDRNEED 129
Query: 531 IGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYV 710
+GAGDQGLMFGYATDETEECMPLT++LAHKLN ++A+LRR+G W RPDSKTQVT +Y+
Sbjct: 130 VGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQVTVQYM 189
Query: 711 FAGGAXVPQRV 743
GA +P R+
Sbjct: 190 QDNGAVIPVRI 200
Score = 39.1 bits (87), Expect = 0.021
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 731 PTESHTVXVSLQHSEXXXXR-LAR*DQRXVIKEVIPXQYLDERTVIPXNPCXPF 889
P HT+ +S+QH+E + R + VI+ V+P +YLDE TV P F
Sbjct: 197 PVRIHTIVISVQHNEDITLEEMRRALKEQVIRAVVPAKYLDEDTVYHLQPSGRF 250
>AL359195-2|CAI13695.1| 395|Homo sapiens methionine
adenosyltransferase I, alpha protein.
Length = 395
Score = 307 bits (754), Expect = 3e-83
Identities = 138/191 (72%), Positives = 169/191 (88%)
Frame = +3
Query: 171 YDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCG 350
+ + +G VF+FTSESVGEGHPDK+CDQISDA+LDAHL QDP+AKVACET+ KTGMVLLCG
Sbjct: 11 HSLSEG-VFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCG 69
Query: 351 EITSKANVDYQKVVRETVKHIGYDDSSKGFDWRTLNLLVAIEEQSPNIAEGVYLDREEID 530
EITS A VDYQ+VVR+T+KHIGYDDS+KGFD++T N+LVA+E+QSP+IA+ V+LDR E D
Sbjct: 70 EITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLDRNEED 129
Query: 531 IGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYV 710
+GAGDQGLMFGYATDETEECMPLT++LAHKLN ++A+LRR+G W RPDSKTQVT +Y+
Sbjct: 130 VGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQVTVQYM 189
Query: 711 FAGGAXVPQRV 743
GA +P R+
Sbjct: 190 QDNGAVIPVRI 200
Score = 39.1 bits (87), Expect = 0.021
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 731 PTESHTVXVSLQHSEXXXXR-LAR*DQRXVIKEVIPXQYLDERTVIPXNPCXPF 889
P HT+ +S+QH+E + R + VI+ V+P +YLDE TV P F
Sbjct: 197 PVRIHTIVISVQHNEDITLEEMRRALKEQVIRAVVPAKYLDEDTVYHLQPSGRF 250
>AL359195-3|CAI13696.1| 145|Homo sapiens methionine
adenosyltransferase I, alpha protein.
Length = 145
Score = 158 bits (383), Expect = 3e-38
Identities = 72/115 (62%), Positives = 94/115 (81%), Gaps = 3/115 (2%)
Frame = +3
Query: 408 HIGYDDSSK---GFDWRTLNLLVAIEEQSPNIAEGVYLDREEIDIGAGDQGLMFGYATDE 578
H+ D ++K GFD++T N+LVA+E+QSP+IA+ V+LDR E D+GAGDQGLMFGYATDE
Sbjct: 23 HLKQDPNAKVACGFDFKTCNVLVALEQQSPDIAQCVHLDRNEEDVGAGDQGLMFGYATDE 82
Query: 579 TEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGAXVPQRV 743
TEECMPLT++LAHKLN ++A+LRR+G W RPDSKTQVT +Y+ GA +P R+
Sbjct: 83 TEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQVTVQYMQDNGAVIPVRI 137
Score = 74.5 bits (175), Expect = 5e-13
Identities = 35/48 (72%), Positives = 39/48 (81%)
Frame = +3
Query: 210 ESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGE 353
ESVGEGHPDK+CDQISDA+LDAHL QDP+AKVAC KT VL+ E
Sbjct: 1 ESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACGFDFKTCNVLVALE 48
>AK222852-1|BAD96572.1| 565|Homo sapiens ubiquitin specific
protease 39 variant protein.
Length = 565
Score = 32.7 bits (71), Expect = 1.8
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -1
Query: 671 CPPKFSISPELCNFLIEFVCK-HYSQRHAFFCLICC-ITEHQALISSPYIYFFSVKIHTL 498
CP +I+ + +F E +C S +A+ CL+C + + L S YI+ H
Sbjct: 105 CPYLDTINRSVLDFDFEKLCSISLSHINAYVCLVCGKYFQGRGLKSHAYIHSVQFSHHVF 164
Query: 497 SNIWTLFFNC 468
N+ TL F C
Sbjct: 165 LNLHTLKFYC 174
>BC067273-1|AAH67273.1| 565|Homo sapiens USP39 protein protein.
Length = 565
Score = 32.3 bits (70), Expect = 2.4
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -1
Query: 671 CPPKFSISPELCNFLIEFVCK-HYSQRHAFFCLICC-ITEHQALISSPYIYFFSVKIHTL 498
CP +I+ + +F E +C S +A+ CL+C + + L S YI+ H
Sbjct: 105 CPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVF 164
Query: 497 SNIWTLFFNC 468
N+ TL F C
Sbjct: 165 LNLHTLKFYC 174
>BC001384-1|AAH01384.2| 562|Homo sapiens USP39 protein protein.
Length = 562
Score = 32.3 bits (70), Expect = 2.4
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -1
Query: 671 CPPKFSISPELCNFLIEFVCK-HYSQRHAFFCLICC-ITEHQALISSPYIYFFSVKIHTL 498
CP +I+ + +F E +C S +A+ CL+C + + L S YI+ H
Sbjct: 102 CPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVF 161
Query: 497 SNIWTLFFNC 468
N+ TL F C
Sbjct: 162 LNLHTLKFYC 171
>AF353989-1|AAK49524.1| 565|Homo sapiens U4/U6.U5
tri-snRNP-associated 65 kDa protein protein.
Length = 565
Score = 32.3 bits (70), Expect = 2.4
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -1
Query: 671 CPPKFSISPELCNFLIEFVCK-HYSQRHAFFCLICC-ITEHQALISSPYIYFFSVKIHTL 498
CP +I+ + +F E +C S +A+ CL+C + + L S YI+ H
Sbjct: 105 CPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVF 164
Query: 497 SNIWTLFFNC 468
N+ TL F C
Sbjct: 165 LNLHTLKFYC 174
>BC028352-1|AAH28352.1| 691|Homo sapiens TBC1 domain family, member
15 protein.
Length = 691
Score = 30.3 bits (65), Expect = 9.8
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +3
Query: 99 WANSKFRMPETSKMNGYAKTNGHSYDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAH 278
W K + P T+ M G++K + +D GS S + P +M D +SDAI
Sbjct: 235 WKKIK-KDPYTATMIGFSKVTNYIFDSLRGS-----DPSTHQRPPSEMADFLSDAIPGLK 288
Query: 279 LNQDPD 296
+NQ +
Sbjct: 289 INQQEE 294
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,634,044
Number of Sequences: 237096
Number of extensions: 2718558
Number of successful extensions: 8638
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 8494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8629
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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