Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_E04
         (932 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1140 + 34386042-34386302,34386738-34386917,34386999-343870...    52   7e-07
09_04_0404 + 17322664-17322718,17323676-17323849,17324695-173248...    34   0.19 
10_08_0923 + 21597593-21597629,21598089-21598135,21598253-215983...    33   0.32 
11_06_0285 - 21914563-21914707,21914954-21915078,21915215-219153...    29   5.3  
05_02_0037 + 5883285-5884292                                           28   9.2  

>02_05_1140 +
           34386042-34386302,34386738-34386917,34386999-34387080,
           34387180-34387287,34387442-34387630,34387814-34388010
          Length = 338

 Score = 52.0 bits (119), Expect = 7e-07
 Identities = 27/74 (36%), Positives = 39/74 (52%)
 Frame = +1

Query: 595 VGDQVVALPEYRAWAELVSVPAQYVYALPEGMSALDAVAITTNYVVAYLLLFXMANLTPG 774
           VGDQV AL     +AE V VPA  +  +PEG+S  DA  +       +  +F  ++L+P 
Sbjct: 84  VGDQVCALLSSGGYAEKVVVPAGQLLPVPEGVSLTDAAGLPEVACTVWSTVFVTSHLSPS 143

Query: 775 KSLLVHSAGGRCGT 816
           +S L+H      GT
Sbjct: 144 ESFLIHGGSSGIGT 157


>09_04_0404 +
           17322664-17322718,17323676-17323849,17324695-17324876,
           17325312-17325417,17325708-17325784,17326485-17326572,
           17327320-17327509,17328353-17328479,17328584-17328664,
           17328815-17328916,17329042-17329137,17329279-17329353,
           17329746-17329865,17330319-17330447,17330762-17330839,
           17331330-17331416,17333538-17333651,17334294-17334362,
           17334741-17334785
          Length = 664

 Score = 33.9 bits (74), Expect = 0.19
 Identities = 24/75 (32%), Positives = 40/75 (53%)
 Frame = +1

Query: 589 LKVGDQVVALPEYRAWAELVSVPAQYVYALPEGMSALDAVAITTNYVVAYLLLFXMANLT 768
           +KVG  V AL  + A++E   VPA+++  LP      + VA+ T+ + A + L     + 
Sbjct: 375 IKVGSPV-ALMIFGAYSEFTQVPAKHL--LPVPRPDPEVVAMLTSGLTASIALEKAGQMA 431

Query: 769 PGKSLLVHSAGGRCG 813
            G+ +LV +A G  G
Sbjct: 432 SGQVVLVTAAAGGTG 446


>10_08_0923 +
           21597593-21597629,21598089-21598135,21598253-21598391,
           21598449-21598562,21599206-21599432,21599578-21599835,
           21600014-21600304,21600766-21600830,21601116-21601299,
           21601857-21601964
          Length = 489

 Score = 33.1 bits (72), Expect = 0.32
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
 Frame = +1

Query: 589 LKVGDQV-VALPEYRAWAELVSVPAQYVYALPEGMSALDAVAITTNYVVAYLLLFXMANL 765
           ++VGD V  A      + E   +PA     +P  +  + A ++    +  Y+L+     +
Sbjct: 130 IEVGDVVGYADTPMGTYTEEQIIPATLAIPIPPSVDHITAASVLLKGMTTYVLVKQAFKI 189

Query: 766 TPGKSLLVHSAGGRCGTKL 822
             G ++LVH+A G  G+ L
Sbjct: 190 QAGHTVLVHAAAGGVGSLL 208


>11_06_0285 -
           21914563-21914707,21914954-21915078,21915215-21915382,
           21917184-21917475,21917927-21918096
          Length = 299

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 683 KECLPWMLLPSPXTTWWPICCSS 751
           K C  W+L+ S   TWW  C S+
Sbjct: 210 KGCNGWVLIDSMVNTWWRTCVSN 232


>05_02_0037 + 5883285-5884292
          Length = 335

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 17/42 (40%), Positives = 19/42 (45%)
 Frame = +2

Query: 617 SPSTALGPSWCLYRPSTCTRCPKECLPWMLLPSPXTTWWPIC 742
           SP  A    WCL+R      C   C  W   PSP + WWP C
Sbjct: 290 SPDAAAQGGWCLFR------C---C--W---PSPPSVWWPRC 317


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,032,671
Number of Sequences: 37544
Number of extensions: 272162
Number of successful extensions: 617
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)