Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_D24
(976 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 0.94
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 0.94
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 31 1.6
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 29 3.8
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 29 3.8
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.8
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 5.0
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 6.6
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 29 6.6
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 6.6
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 6.6
U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protei... 28 8.8
L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen... 28 8.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 8.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 8.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 8.8
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.5 bits (68), Expect = 0.94
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +1
Query: 382 PPXXERXXXXXPPPXPXXXTGPXGGAXXLSXRRGPXPPXGKGXCXXGPPP 531
PP PPP P + G R P PP G G PPP
Sbjct: 338 PPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 0.94
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +1
Query: 382 PPXXERXXXXXPPPXPXXXTGPXGGAXXLSXRRGPXPPXGKGXCXXGPPP 531
PP PPP P + G R P PP G G PPP
Sbjct: 348 PPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 397
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 418 PPXPXXXTGPXGGAXXLSXRRGPXPPXGKGXCXXGPPPRP 537
PP P G G P PP G GPPP+P
Sbjct: 112 PPGPPGPPGRDGRPGAPGRPGNPGPPGRDGALLPGPPPKP 151
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = -3
Query: 530 GGGPXXXXPFPXGGXGPLRXDXXXAPPXGPVXXXGXGGGXXXXFLSFXGGA 378
GG P G GP PP G G GGG + GA
Sbjct: 258 GGAPGGASTMTAMGGGPSAFGGAPPPPSGSAMGGGGGGGATSAYFGVGSGA 308
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = -3
Query: 530 GGGPXXXXPFPXGGXGPLRXDXXXAPPXGPVXXXGXGGGXXXXFLSFXGGA 378
GG P G GP PP G G GGG + GA
Sbjct: 152 GGAPGGASTMTAMGGGPSAFGGAPPPPSGSAMGGGGGGGATSAYFGVGSGA 202
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = +1
Query: 382 PPXXERXXXXXPPPXPXXXTGPXGGAXXLSXRRGPXPPXGKGXCXXGPPPRP 537
PP PPP P P GG +S P PP G PPP P
Sbjct: 731 PPGGLPPITGGPPPPP-----PPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 4/45 (8%)
Frame = +1
Query: 415 PPPXPXXXTGPX---GGAXXLSX-RRGPXPPXGKGXCXXGPPPRP 537
PPP + P GG+ L GP PP G GPPP P
Sbjct: 686 PPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPP 730
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +1
Query: 382 PPXXERXXXXXPPPXPXXXTGPXGGAXXLSXRRGPXPPXGKGXCXXGPPPRP 537
PP PPP P P G P PP G GPPP P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPP-----PPPPPGGLPPISGGPPPPP 762
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = +1
Query: 382 PPXXERXXXXXPPPXPXXXTGPXGGAXXLSXRRGPXPPXGKGXCXXGPPPRP 537
PP PPP P P GG +S P PP G PPP P
Sbjct: 731 PPGGLPPITGGPPPPP-----PPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 4/45 (8%)
Frame = +1
Query: 415 PPPXPXXXTGPX---GGAXXLSX-RRGPXPPXGKGXCXXGPPPRP 537
PPP + P GG+ L GP PP G GPPP P
Sbjct: 686 PPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPP 730
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +1
Query: 382 PPXXERXXXXXPPPXPXXXTGPXGGAXXLSXRRGPXPPXGKGXCXXGPPPRP 537
PP PPP P P G P PP G GPPP P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPP-----PPPPPGGLPPISGGPPPPP 762
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = +1
Query: 382 PPXXERXXXXXPPPXPXXXTGPXGGAXXLSXRRGPXPPXGKGXCXXGPPPRP 537
PP PPP P P GG +S P PP G PPP P
Sbjct: 314 PPGGLPPITGGPPPPP-----PPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 4/45 (8%)
Frame = +1
Query: 415 PPPXPXXXTGPX---GGAXXLSX-RRGPXPPXGKGXCXXGPPPRP 537
PPP + P GG+ L GP PP G GPPP P
Sbjct: 269 PPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPP 313
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +1
Query: 382 PPXXERXXXXXPPPXPXXXTGPXGGAXXLSXRRGPXPPXGKGXCXXGPPPRP 537
PP PPP P P G P PP G GPPP P
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPP-----PPPPPGGLPPISGGPPPPP 345
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = +3
Query: 264 GXPRXPTSWGRASGPAPQKKGXXKXGPCXAHVPIXXXXXPPXKXKKXXXXPPPP 425
G PR S PAP PC P+ PP PPPP
Sbjct: 72 GAPRPSPSCCPYVPPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPP 125
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 28.7 bits (61), Expect = 6.6
Identities = 19/67 (28%), Positives = 22/67 (32%), Gaps = 8/67 (11%)
Frame = +1
Query: 361 PSXXXXAPPXXERXXXXXPPPXPXXXTGPXGGAXXLSXR--------RGPXPPXGKGXCX 516
P PP + PP P GP GG R GP PP +
Sbjct: 674 PGGGQGPPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRGYG 733
Query: 517 XGPPPRP 537
PPP+P
Sbjct: 734 YPPPPQP 740
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 382 PPXXERXXXXXPPPXPXXXTGPXGGAXXLSXRRGP 486
PP R PPP P G GG RGP
Sbjct: 143 PPRHHRQYDPLPPPPPPPLMGGSGGHWRSGGERGP 177
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 28.7 bits (61), Expect = 6.6
Identities = 19/67 (28%), Positives = 22/67 (32%), Gaps = 8/67 (11%)
Frame = +1
Query: 361 PSXXXXAPPXXERXXXXXPPPXPXXXTGPXGGAXXLSXR--------RGPXPPXGKGXCX 516
P PP + PP P GP GG R GP PP +
Sbjct: 674 PGGGQGPPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRGYG 733
Query: 517 XGPPPRP 537
PPP+P
Sbjct: 734 YPPPPQP 740
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +1
Query: 415 PPPXPXXXTGPXGGAXXLSXRRGPXPPXGKGXCXXGPPPRP 537
PPP P G S RR P PP G G PPP P
Sbjct: 137 PPPPPTGEPQDLSGEGNAS-RRPPPPPKGTG----SPPPPP 172
>U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protein
36 protein.
Length = 307
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 418 PPXPXXXTGPXGGAXXLSXRRGPXPPXGKGXCXXGPPPR 534
PP GP GG + PP +G C P PR
Sbjct: 264 PPGDAGGPGPVGGQGPPGPQGPQGPPGDEGSCDHCPEPR 302
>L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen
protein.
Length = 307
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 418 PPXPXXXTGPXGGAXXLSXRRGPXPPXGKGXCXXGPPPR 534
PP GP GG + PP +G C P PR
Sbjct: 264 PPGDAGGPGPVGGQGPPGPQGPQGPPGDEGSCDHCPEPR 302
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +1
Query: 415 PPPXPXXXTGPXGGAXXLSXRRGPXPPXGKGXCXXGPPPR 534
PPP P P G+ G PP G G PPPR
Sbjct: 297 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG--SPPPPPR 334
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +1
Query: 415 PPPXPXXXTGPXGGAXXLSXRRGPXPPXGKGXCXXGPPPR 534
PPP P P G+ G PP G G PPPR
Sbjct: 318 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG--SPPPPPR 355
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +1
Query: 415 PPPXPXXXTGPXGGAXXLSXRRGPXPPXGKGXCXXGPPPR 534
PPP P P G+ G PP G G PPPR
Sbjct: 303 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG--SPPPPPR 340
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,436,585
Number of Sequences: 27780
Number of extensions: 215541
Number of successful extensions: 569
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2531861596
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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