Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_D18
         (891 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051932-1|AAK93356.1|  562|Drosophila melanogaster LD41462p pro...    30   3.7  
AE014298-1854|AAF48234.1|  562|Drosophila melanogaster CG4332-PA...    30   3.7  
Z50152-2|CAA90514.1| 3358|Drosophila melanogaster trithorax prot...    30   4.9  
Z50152-1|CAA90513.1| 3726|Drosophila melanogaster trithorax prot...    30   4.9  
Z31725-2|CAA83515.1| 3358|Drosophila melanogaster predicted trit...    30   4.9  
Z31725-1|CAA83516.1| 3726|Drosophila melanogaster predicted trit...    30   4.9  

>AY051932-1|AAK93356.1|  562|Drosophila melanogaster LD41462p
           protein.
          Length = 562

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +2

Query: 80  RAFLSLLYFHIFVSRLFCVSLNLLIICSVSCCRNIELFLVLFRLNFLYPVNSSR 241
           RAF+    F+ F+   F   + +     V+C R+  +F++     +LYPV+ SR
Sbjct: 481 RAFMYKA-FNTFIDDFFAFIITMPTAHRVACLRDDIVFIIYLYQRWLYPVDKSR 533


>AE014298-1854|AAF48234.1|  562|Drosophila melanogaster CG4332-PA
           protein.
          Length = 562

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +2

Query: 80  RAFLSLLYFHIFVSRLFCVSLNLLIICSVSCCRNIELFLVLFRLNFLYPVNSSR 241
           RAF+    F+ F+   F   + +     V+C R+  +F++     +LYPV+ SR
Sbjct: 481 RAFMYKA-FNTFIDDFFAFIITMPTAHRVACLRDDIVFIIYLYQRWLYPVDKSR 533


>Z50152-2|CAA90514.1| 3358|Drosophila melanogaster trithorax protein
            trxI protein.
          Length = 3358

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 20/69 (28%), Positives = 31/69 (44%)
 Frame = +3

Query: 435  NYLWDVQIFQQAPHLPGIHGRLAFQMEVQRRAVRLKPEGLHRSVWLHRPQQARRINSKET 614
            NYL     F Q   L G  G+   Q   Q   ++L+P+ L    +L +P  A + N+ + 
Sbjct: 1960 NYLQSATSFPQVQRL-GSLGQFGLQGLQQ---LQLQPQSLGNGFFLSQPNPATQANTDDL 2015

Query: 615  SVYINRNNG 641
             +Y N   G
Sbjct: 2016 QIYANSLQG 2024


>Z50152-1|CAA90513.1| 3726|Drosophila melanogaster trithorax protein
            trxII protein.
          Length = 3726

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 20/69 (28%), Positives = 31/69 (44%)
 Frame = +3

Query: 435  NYLWDVQIFQQAPHLPGIHGRLAFQMEVQRRAVRLKPEGLHRSVWLHRPQQARRINSKET 614
            NYL     F Q   L G  G+   Q   Q   ++L+P+ L    +L +P  A + N+ + 
Sbjct: 2328 NYLQSATSFPQVQRL-GSLGQFGLQGLQQ---LQLQPQSLGNGFFLSQPNPATQANTDDL 2383

Query: 615  SVYINRNNG 641
             +Y N   G
Sbjct: 2384 QIYANSLQG 2392


>Z31725-2|CAA83515.1| 3358|Drosophila melanogaster predicted trithorax
            protein protein.
          Length = 3358

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 20/69 (28%), Positives = 31/69 (44%)
 Frame = +3

Query: 435  NYLWDVQIFQQAPHLPGIHGRLAFQMEVQRRAVRLKPEGLHRSVWLHRPQQARRINSKET 614
            NYL     F Q   L G  G+   Q   Q   ++L+P+ L    +L +P  A + N+ + 
Sbjct: 1960 NYLQSATSFPQVQRL-GSLGQFGLQGLQQ---LQLQPQSLGNGFFLSQPNPATQANTDDL 2015

Query: 615  SVYINRNNG 641
             +Y N   G
Sbjct: 2016 QIYANSLQG 2024


>Z31725-1|CAA83516.1| 3726|Drosophila melanogaster predicted trithorax
            protein protein.
          Length = 3726

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 20/69 (28%), Positives = 31/69 (44%)
 Frame = +3

Query: 435  NYLWDVQIFQQAPHLPGIHGRLAFQMEVQRRAVRLKPEGLHRSVWLHRPQQARRINSKET 614
            NYL     F Q   L G  G+   Q   Q   ++L+P+ L    +L +P  A + N+ + 
Sbjct: 2328 NYLQSATSFPQVQRL-GSLGQFGLQGLQQ---LQLQPQSLGNGFFLSQPNPATQANTDDL 2383

Query: 615  SVYINRNNG 641
             +Y N   G
Sbjct: 2384 QIYANSLQG 2392


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,561,772
Number of Sequences: 53049
Number of extensions: 652326
Number of successful extensions: 1446
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1446
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)