Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_D17
         (891 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    25   0.93 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    25   0.93 
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    25   0.93 
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    25   1.2  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    24   1.6  
EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor 1-a...    24   1.6  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    24   1.6  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    24   2.1  
AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.           23   4.9  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 25.0 bits (52), Expect = 0.93
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
 Frame = -3

Query: 784 GLHE-SLSXPCCRTXGVTWSTAIVLKAIPRIPSNLAATKASPGSDTASANVWRRTLSPPT 608
           GLH  S S P   + G   + A  L +  R  S  +   AS  S TAS+    R+   P+
Sbjct: 142 GLHGLSSSAPTGSSCGPGAAAAAALLSKRRSVSECSLGTASSTSSTASSRNSDRSAGSPS 201

Query: 607 VTSSVE 590
           V+ S E
Sbjct: 202 VSESDE 207


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 25.0 bits (52), Expect = 0.93
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = -1

Query: 516 CGCRTCCAANKRCWCSGTFWKAPRGWRIRCRIPP*TTAAAC 394
           C C+TC +  K C+        P   + + R+PP T    C
Sbjct: 435 CECKTCNSKTKCCFAQDD-GLCPYTLKHKIRVPPGTPIYEC 474


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 25.0 bits (52), Expect = 0.93
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 740 GHMVHCDSAEGHPEDPV 690
           GHM H  +  GHP  P+
Sbjct: 120 GHMGHTPTPNGHPSTPI 136


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
 Frame = +3

Query: 438 SNLWVPSKKCHYTNIACL---LHNKYDSRKSKTYVAN 539
           SN + P   CH  +IAC    +  K D R  KT   N
Sbjct: 354 SNGYTPVLDCHTAHIACKFADIKEKCDRRNGKTTEEN 390


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
 Frame = +3

Query: 438 SNLWVPSKKCHYTNIACL---LHNKYDSRKSKTYVAN 539
           SN + P   CH  +IAC    +  K D R  KT   N
Sbjct: 354 SNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEEN 390


>EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor
           1-alpha protein.
          Length = 119

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
 Frame = +3

Query: 438 SNLWVPSKKCHYTNIACL---LHNKYDSRKSKTYVAN 539
           SN + P   CH  +IAC    +  K D R  KT   N
Sbjct: 65  SNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEEN 101


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -3

Query: 700 RIPSNLAATKASPGSDTASANVWRRTLSPPTVTSS 596
           R  S   + KA PGS  A +   ++ LSP  + SS
Sbjct: 886 RPASQATSVKAEPGSIMAMSESSKKVLSPGELLSS 920


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +3

Query: 693 GILGMAFSTIAVDHVTPXVRQHGWLRDSC 779
           G L    S +   ++TP +++H  + D+C
Sbjct: 301 GALAGLLSVLGYKYITPLIQKHLKIHDTC 329


>AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/36 (22%), Positives = 20/36 (55%)
 Frame = +3

Query: 159 RLLKTTMGKISLFFLALIASSVMALYRVPLHRMKTA 266
           R+++  +GK+ +  +    + V++LY  P+   + A
Sbjct: 76  RVIRAKLGKVGVHCMKTTQAVVVSLYEDPIQPQQAA 111


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,060
Number of Sequences: 438
Number of extensions: 5309
Number of successful extensions: 22
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)