Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_D07
         (927 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein...    29   3.6  
U13072-7|AAK31398.2|  382|Caenorhabditis elegans Nematode astaci...    29   6.2  

>U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein 1
            protein.
          Length = 1376

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
 Frame = -2

Query: 173  KRAESERXSTICTTLDGRAM--CDGC-GCCAKHCLXSQAIKIXXG 48
            +R+  E    IC ++DG  M  CDGC   C   C   +  K+  G
Sbjct: 1081 ERSSREALCQICKSMDGDEMLVCDGCESGCHMECFRPRMTKVPEG 1125


>U13072-7|AAK31398.2|  382|Caenorhabditis elegans Nematode astacin
           protease protein 7 protein.
          Length = 382

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -3

Query: 331 SSSQPASVLQKGVTVC-WTMTRLTGRARYDTCTGIKPSHC 215
           +S++P+S  +  +TVC WT  R    A Y   + + P  C
Sbjct: 340 NSNKPSSQCEDRITVCWWTADRCRSPAIYQVMSSLCPKTC 379


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,107,495
Number of Sequences: 27780
Number of extensions: 347343
Number of successful extensions: 1122
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)