Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_D05
         (901 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0016 + 17177812-17178084,17178358-17178480,17178526-171788...    30   2.2  
02_01_0223 + 1453478-1453750,1455788-1456018,1456066-1456200,145...    29   3.8  
09_04_0161 - 15232074-15232139,15232299-15232406,15233417-152335...    29   6.7  
04_04_0361 + 24701275-24701350,24702565-24703068,24703158-24703711     28   8.8  

>01_05_0016 +
           17177812-17178084,17178358-17178480,17178526-17178862,
           17178896-17179039,17179555-17180219
          Length = 513

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 338 EMYNDGHAPAWRDLRPHQRAP 400
           E Y+DG  P W  +RPHQ++P
Sbjct: 281 EEYDDGFDPHWGWVRPHQQSP 301


>02_01_0223 +
           1453478-1453750,1455788-1456018,1456066-1456200,
           1457918-1457971,1458417-1458482,1458593-1458679,
           1459338-1459394,1459470-1459500,1459577-1459634,
           1459710-1459761,1459881-1459917,1460008-1460210,
           1460556-1460633,1460683-1460853,1461126-1461239
          Length = 548

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -3

Query: 641 HLHHKGFTDDMAVNEEVGIDLVRSGQVETLAVGSVEARG 525
           H HH G   D A   EV  D V +      A G+V+ RG
Sbjct: 24  HHHHDGAAGDSAAAAEVPQDKVVAAAAAAAAAGNVQRRG 62


>09_04_0161 -
           15232074-15232139,15232299-15232406,15233417-15233506,
           15233617-15233733,15234408-15234527,15234930-15236168
          Length = 579

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 24/110 (21%), Positives = 48/110 (43%)
 Frame = +1

Query: 493 STEACSSTLLLPRASTEPTARVSTCPLLTRSIPTSSLTAMSSVKPL**R*LKPPRTRSSG 672
           STE C S     RA T P   +      +++   +S  + S   P   R   P R++S+G
Sbjct: 292 STERCKSVSRPSRAVTLPVPVLHRSSSPSKASSVTSSISRSFQSPSRTRPSTPSRSQSAG 351

Query: 673 NTTASRVTDDNLVVIDWRKGVRRSLSQNDVMSYFMEDVDLNTYMYYLHMN 822
           +  +   +     ++D +KG + S   + + +     +  N Y+ ++ +N
Sbjct: 352 SIQSGVASPIISYMVDAKKGKKNS---SQIENIHQLHLSYNRYLQWIFVN 398


>04_04_0361 + 24701275-24701350,24702565-24703068,24703158-24703711
          Length = 377

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 424 KTLTASSIWSSLVWTKVSPRGSMPIVIHLH 335
           +T+  SS W S  W   + RG + ++IH H
Sbjct: 137 QTVYTSSGWDSYAWAFKAKRGLVSLIIHNH 166


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,384,772
Number of Sequences: 37544
Number of extensions: 442378
Number of successful extensions: 1081
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1081
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)