Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_D03
(931 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 93 3e-19
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 65 8e-11
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 62 7e-10
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 60 2e-09
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 60 2e-09
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 57 2e-08
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 57 2e-08
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 57 2e-08
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 57 2e-08
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 57 2e-08
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 56 3e-08
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 56 5e-08
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 56 5e-08
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 54 2e-07
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 53 3e-07
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 52 8e-07
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 51 1e-06
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 50 3e-06
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 50 3e-06
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 49 5e-06
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 48 1e-05
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 45 7e-05
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 45 9e-05
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 45 9e-05
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 44 1e-04
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 44 2e-04
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 44 2e-04
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 43 4e-04
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 42 6e-04
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 42 6e-04
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 42 8e-04
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 42 8e-04
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 40 0.002
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 40 0.002
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 40 0.003
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 40 0.003
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 40 0.003
U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein. 39 0.006
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 38 0.008
U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein. 38 0.008
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 38 0.014
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 36 0.031
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 36 0.031
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 35 0.072
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 34 0.13
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 34 0.17
AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical ... 33 0.29
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 31 0.89
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 31 0.89
U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical pr... 31 0.89
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 31 0.89
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 31 0.89
U41276-1|AAA82469.1| 238|Caenorhabditis elegans Hypothetical pr... 31 1.6
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 31 1.6
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 30 2.7
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 30 2.7
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 30 2.7
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 30 2.7
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 30 2.7
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 29 6.3
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 93.1 bits (221), Expect = 3e-19
Identities = 39/53 (73%), Positives = 47/53 (88%)
Frame = +2
Query: 485 GXDGIIIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTKKVVD 643
G GII+VYD T Q++F+NVKQWL+EIDRYAC+NVNKLLVGNKCDLT K+ V+
Sbjct: 83 GAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKCDLTAKRAVE 135
Score = 66.5 bits (155), Expect = 3e-11
Identities = 32/48 (66%), Positives = 38/48 (79%)
Frame = +3
Query: 630 KRLSTLXTAKQYAEQLGIPXLETSAKNSTNVEQAFMTMAAXIKARVGP 773
KR A+ YA QLGIP LETSAK+STNVEQAF+TMA+ IK+R+GP
Sbjct: 131 KRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMGP 178
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/59 (49%), Positives = 33/59 (55%)
Frame = +1
Query: 301 VGTXCLSXXCAXDTXTDSXXXXIGXXXXXXXVNVXGNTIE*QIWDTXGQERXTTITSSY 477
VG CL A DT T+S IG + + G TI+ QIWDT GQER TITSSY
Sbjct: 22 VGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSY 80
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 64.9 bits (151), Expect = 8e-11
Identities = 27/52 (51%), Positives = 40/52 (76%)
Frame = +2
Query: 485 GXDGIIIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 640
G G+++VYD T+ +SF NVK+WL+EI+ CD+V K+LVGNKC+ ++VV
Sbjct: 82 GTHGVVVVYDVTNGESFGNVKRWLQEIEN-NCDSVQKVLVGNKCEENERRVV 132
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +1
Query: 301 VGTXCLSXXCAXDTXTDSXXXXIGXXXXXXXVNVXGNTIE*QIWDTXGQERXTTITSSY 477
VG L A +T +++ IG +++ G ++ QIWDT GQER TITS+Y
Sbjct: 21 VGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDTAGQERFRTITSTY 79
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 654 AKQYAEQLGIPXLETSAKNSTNVEQAFMTMAAXI 755
A+ YA+ + I ETSAK NVE F + + +
Sbjct: 137 ARNYAQSMNISFFETSAKEDKNVEPMFTCITSLV 170
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 61.7 bits (143), Expect = 7e-10
Identities = 24/52 (46%), Positives = 39/52 (75%)
Frame = +2
Query: 485 GXDGIIIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 640
G GI++VYD T+ SF N+ +WL ID +A ++V K+++GNKCD++ ++VV
Sbjct: 81 GAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNKCDMSDRRVV 132
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +1
Query: 301 VGTXCLSXXCAXDTXTDSXXXXIGXXXXXXXVNVXGNTIE*QIWDTXGQERXTTITSSY 477
VG C+ + D + IG + + G I+ QIWDT GQER TIT+SY
Sbjct: 20 VGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHTITTSY 78
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 60.5 bits (140), Expect = 2e-09
Identities = 22/52 (42%), Positives = 37/52 (71%)
Frame = +2
Query: 485 GXDGIIIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 640
G GII+VYD T++ SF N+K W+ I+ +A +V ++++GNKCD+ ++ V
Sbjct: 80 GAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEERREV 131
Score = 45.6 bits (103), Expect = 5e-05
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +1
Query: 301 VGTXCLSXXCAXDTXTDSXXXXIGXXXXXXXVNVXGNTIE*QIWDTXGQERXTTITSSY 477
VG C+ + D+ +S IG + + G I+ QIWDT GQER TIT++Y
Sbjct: 19 VGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAY 77
Score = 36.3 bits (80), Expect = 0.031
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +3
Query: 657 KQYAEQLGIPXLETSAKNSTNVEQAFMTMAAXIKARV 767
+Q A + G LETSAK + N+++AF T+A IK+++
Sbjct: 137 EQLAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKM 173
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 60.5 bits (140), Expect = 2e-09
Identities = 22/52 (42%), Positives = 37/52 (71%)
Frame = +2
Query: 485 GXDGIIIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 640
G GII+VYD T++ SF N+K W+ I+ +A +V ++++GNKCD+ ++ V
Sbjct: 80 GAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEERREV 131
Score = 45.6 bits (103), Expect = 5e-05
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +1
Query: 301 VGTXCLSXXCAXDTXTDSXXXXIGXXXXXXXVNVXGNTIE*QIWDTXGQERXTTITSSY 477
VG C+ + D+ +S IG + + G I+ QIWDT GQER TIT++Y
Sbjct: 19 VGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAY 77
Score = 36.3 bits (80), Expect = 0.031
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +3
Query: 657 KQYAEQLGIPXLETSAKNSTNVEQAFMTMAAXIKARV 767
+Q A + G LETSAK + N+++AF T+A IK+++
Sbjct: 137 EQLAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKM 173
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 57.2 bits (132), Expect = 2e-08
Identities = 22/52 (42%), Positives = 38/52 (73%)
Frame = +2
Query: 485 GXDGIIIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 640
G G I++YD T+++SF++V+ W +I Y+ +N +LVGNKCD+ +++VV
Sbjct: 94 GAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVV 145
Score = 35.1 bits (77), Expect = 0.072
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +1
Query: 337 DTXTDSXXXXIGXXXXXXXVNVXGNTIE*QIWDTXGQERXTTITSSY 477
D+ T + +G V ++ QIWDT GQER TIT++Y
Sbjct: 45 DSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAY 91
Score = 33.5 bits (73), Expect = 0.22
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 630 KRLSTLXTAKQYAEQLGIPXLETSAKNSTNVEQAFMTMAAXI 755
+R+ ++ +Q A+QLG+ ETSAK + NV+ F + I
Sbjct: 142 ERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEKLVEII 183
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 57.2 bits (132), Expect = 2e-08
Identities = 22/52 (42%), Positives = 38/52 (73%)
Frame = +2
Query: 485 GXDGIIIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 640
G G I++YD T+++SF++V+ W +I Y+ +N +LVGNKCD+ +++VV
Sbjct: 94 GAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVV 145
Score = 35.1 bits (77), Expect = 0.072
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +1
Query: 337 DTXTDSXXXXIGXXXXXXXVNVXGNTIE*QIWDTXGQERXTTITSSY 477
D+ T + +G V ++ QIWDT GQER TIT++Y
Sbjct: 45 DSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAY 91
Score = 33.5 bits (73), Expect = 0.22
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 630 KRLSTLXTAKQYAEQLGIPXLETSAKNSTNVEQAFMTMAAXI 755
+R+ ++ +Q A+QLG+ ETSAK + NV+ F + I
Sbjct: 142 ERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEKLVEII 183
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 57.2 bits (132), Expect = 2e-08
Identities = 22/52 (42%), Positives = 38/52 (73%)
Frame = +2
Query: 485 GXDGIIIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 640
G G I++YD T+++SF++V+ W +I Y+ +N +LVGNKCD+ +++VV
Sbjct: 94 GAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVV 145
Score = 35.1 bits (77), Expect = 0.072
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +1
Query: 337 DTXTDSXXXXIGXXXXXXXVNVXGNTIE*QIWDTXGQERXTTITSSY 477
D+ T + +G V ++ QIWDT GQER TIT++Y
Sbjct: 45 DSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAY 91
Score = 33.5 bits (73), Expect = 0.22
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 630 KRLSTLXTAKQYAEQLGIPXLETSAKNSTNVEQAFMTMAAXI 755
+R+ ++ +Q A+QLG+ ETSAK + NV+ F + I
Sbjct: 142 ERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEKLVEII 183
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 57.2 bits (132), Expect = 2e-08
Identities = 22/52 (42%), Positives = 38/52 (73%)
Frame = +2
Query: 485 GXDGIIIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 640
G G I++YD T+++SF++V+ W +I Y+ +N +LVGNKCD+ +++VV
Sbjct: 108 GAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVV 159
Score = 35.1 bits (77), Expect = 0.072
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +1
Query: 337 DTXTDSXXXXIGXXXXXXXVNVXGNTIE*QIWDTXGQERXTTITSSY 477
D+ T + +G V ++ QIWDT GQER TIT++Y
Sbjct: 59 DSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAY 105
Score = 33.5 bits (73), Expect = 0.22
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 630 KRLSTLXTAKQYAEQLGIPXLETSAKNSTNVEQAFMTMAAXI 755
+R+ ++ +Q A+QLG+ ETSAK + NV+ F + I
Sbjct: 156 ERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEKLVEII 197
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 57.2 bits (132), Expect = 2e-08
Identities = 22/52 (42%), Positives = 38/52 (73%)
Frame = +2
Query: 485 GXDGIIIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 640
G G I++YD T+++SF++V+ W +I Y+ +N +LVGNKCD+ +++VV
Sbjct: 94 GAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVV 145
Score = 35.1 bits (77), Expect = 0.072
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +1
Query: 337 DTXTDSXXXXIGXXXXXXXVNVXGNTIE*QIWDTXGQERXTTITSSY 477
D+ T + +G V ++ QIWDT GQER TIT++Y
Sbjct: 45 DSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAY 91
Score = 33.5 bits (73), Expect = 0.22
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 630 KRLSTLXTAKQYAEQLGIPXLETSAKNSTNVEQAFMTMAAXI 755
+R+ ++ +Q A+QLG+ ETSAK + NV+ F + I
Sbjct: 142 ERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEKLVEII 183
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 56.4 bits (130), Expect = 3e-08
Identities = 19/51 (37%), Positives = 38/51 (74%)
Frame = +2
Query: 491 DGIIIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTKKVVD 643
+GI++ YD T + SF ++++W++++ ++A NV KLL+G KCDL ++ ++
Sbjct: 84 NGIVLCYDITCKQSFGSLQRWIDDVSKFAAPNVVKLLIGTKCDLEDQRAIE 134
Score = 44.4 bits (100), Expect = 1e-04
Identities = 24/61 (39%), Positives = 28/61 (45%)
Frame = +1
Query: 295 MPVGTXCLSXXCAXDTXTDSXXXXIGXXXXXXXVNVXGNTIE*QIWDTXGQERXTTITSS 474
M VG C+ T D IG + V G ++ QIWDT GQER TIT S
Sbjct: 19 MGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDTGGQERFRTITQS 78
Query: 475 Y 477
Y
Sbjct: 79 Y 79
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 690 LETSAKNSTNVEQAFMTMAAXIK 758
LETSAK + NV+ AF+ +A +K
Sbjct: 151 LETSAKGNVNVDNAFLELATILK 173
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 55.6 bits (128), Expect = 5e-08
Identities = 22/54 (40%), Positives = 33/54 (61%)
Frame = +2
Query: 485 GXDGIIIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTKKVVDF 646
G I+VYD T+Q+SF K W++E+ R A N+ L GNK D+ K+ V++
Sbjct: 91 GAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADVANKRTVEY 144
Score = 33.9 bits (74), Expect = 0.17
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +3
Query: 630 KRLSTLXTAKQYAEQLGIPXLETSAKNSTNVEQAFMTMAAXIKARVGP 773
KR A YAE + +ETSAK S NV FM +A K +GP
Sbjct: 139 KRTVEYEEANAYAEDNALLFMETSAKTSMNVNDIFMAIAK--KLPIGP 184
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 367 IGXXXXXXXVNVXGNTIE*QIWDTXGQERXTTITSSY 477
IG V + TI+ +IWDT GQER ++ Y
Sbjct: 52 IGAAFLTQTVCLDDATIKFEIWDTAGQERYHSLAPMY 88
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 55.6 bits (128), Expect = 5e-08
Identities = 20/44 (45%), Positives = 32/44 (72%)
Frame = +2
Query: 485 GXDGIIIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKC 616
G GII+VYD T++ SF N+K W+ I+ +A +V ++++GNKC
Sbjct: 80 GAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKC 123
Score = 45.6 bits (103), Expect = 5e-05
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +1
Query: 301 VGTXCLSXXCAXDTXTDSXXXXIGXXXXXXXVNVXGNTIE*QIWDTXGQERXTTITSSY 477
VG C+ + D+ +S IG + + G I+ QIWDT GQER TIT++Y
Sbjct: 19 VGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAY 77
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 53.6 bits (123), Expect = 2e-07
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = +2
Query: 485 GXDGIIIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKC 616
G GI++VYD T+ SF N+ +WL ID +A ++V K+++GNKC
Sbjct: 81 GAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNKC 124
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +1
Query: 301 VGTXCLSXXCAXDTXTDSXXXXIGXXXXXXXVNVXGNTIE*QIWDTXGQERXTTITSSY 477
VG C+ + D + IG + + G I+ QIWDT GQER TIT+SY
Sbjct: 20 VGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHTITTSY 78
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +2
Query: 494 GIIIVYDSTHQDSFSNV-KQWLEEIDRYACDNVNKLLVGNKCDLTTKKVVDFXYS*AICG 670
G++ VYD T++ SF N+ K WL+EI ++A N +LVGNK D+ ++ VDF + +
Sbjct: 81 GVMCVYDMTNEKSFENLEKYWLKEIKQHAPPNAVLMLVGNKADMDQERKVDFDRAEKLAS 140
Query: 671 TAGHSV 688
G S+
Sbjct: 141 RLGVSL 146
Score = 35.1 bits (77), Expect = 0.072
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 654 AKQYAEQLGIPXLETSAKNSTNVEQAFMTMAAXIKARV 767
A++ A +LG+ E SAK N E+AF T+ A ++ R+
Sbjct: 135 AEKLASRLGVSLYEVSAKTGINCEEAFHTLTAAMRERI 172
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +1
Query: 304 GTXCLSXXCAXDTXTDSXXXXIGXXXXXXXVNVXGNTIE*QIWDTXGQERXTTITSSY 477
G C+ A ++ +G + + + I ++WDT G ER TI +SY
Sbjct: 18 GKSCILLRFAENSFRMDHISTLGVDFKLKTIKLGRDKIRLELWDTAGMERYRTIYNSY 75
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 51.6 bits (118), Expect = 8e-07
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +2
Query: 485 GXDGIIIVYDSTHQDSFSNVKQWLEEIDRYAC-DNVNKLLVGNKCDLTTK 631
G G+I VYD T + SF + W++E+D Y DN+ K++V NK D+ K
Sbjct: 56 GAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANKIDMVRK 105
Score = 36.3 bits (80), Expect = 0.031
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +1
Query: 367 IGXXXXXXXVNVXGNTIE*QIWDTXGQERXTTITSSY 477
IG + + GN ++ IWDT GQER T+T SY
Sbjct: 17 IGVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLTPSY 53
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 51.2 bits (117), Expect = 1e-06
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +2
Query: 485 GXDGIIIVYDSTHQDSFSNVKQWLEEIDRYAC-DNVNKLLVGNKCDLTTKKV 637
G G+I VYD T + SF + W++E+D Y DN+ K++V NK D+ + V
Sbjct: 83 GAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANKIDMPNRVV 134
Score = 37.9 bits (84), Expect = 0.010
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +1
Query: 301 VGTXCLSXXCAXDTXTDSXXXXIGXXXXXXXVNVXGNTIE*QIWDTXGQERXTTITSSY 477
VG L D IG + + GN ++ IWDT GQER T+T SY
Sbjct: 22 VGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLTPSY 80
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 49.6 bits (113), Expect = 3e-06
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +2
Query: 491 DGIIIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDL 622
D +++VYD ++ SF N + WL +I Y + V LVGNKCDL
Sbjct: 77 DALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCDL 120
Score = 33.5 bits (73), Expect = 0.22
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 367 IGXXXXXXXVNVXGNTIE*QIWDTXGQERXTTITSSY 477
+G + + ++ QIWDT GQER ++T+SY
Sbjct: 36 VGIDYRNKLITMGDKKVKLQIWDTAGQERFRSVTTSY 72
Score = 33.5 bits (73), Expect = 0.22
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +3
Query: 627 LKRLSTLXTAKQYAEQLGIPXLETSAKNSTNVEQAFMTMA 746
L R K+ AE IP +ETSAK NV++AF+ +A
Sbjct: 120 LPRAVPTDEGKRLAEAYQIPFMETSAKTGFNVDRAFLGLA 159
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 49.6 bits (113), Expect = 3e-06
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +2
Query: 491 DGIIIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDL 622
D +++VYD ++ SF N + WL +I Y + V LVGNKCDL
Sbjct: 77 DALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCDL 120
Score = 33.5 bits (73), Expect = 0.22
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 367 IGXXXXXXXVNVXGNTIE*QIWDTXGQERXTTITSSY 477
+G + + ++ QIWDT GQER ++T+SY
Sbjct: 36 VGIDYRNKLITMGDKKVKLQIWDTAGQERFRSVTTSY 72
Score = 33.5 bits (73), Expect = 0.22
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +3
Query: 627 LKRLSTLXTAKQYAEQLGIPXLETSAKNSTNVEQAFMTMA 746
L R K+ AE IP +ETSAK NV++AF+ +A
Sbjct: 120 LPRAVPTDEGKRLAEAYQIPFMETSAKTGFNVDRAFLGLA 159
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 48.8 bits (111), Expect = 5e-06
Identities = 21/51 (41%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = +2
Query: 491 DGIIIVYDSTHQDSFSNVKQWLEEIDRYA-CDNVNKLLVGNKCDLTTKKVV 640
D +IVYD T +++F +V++WL+++DR + ++ N L+GNK DL K+ V
Sbjct: 130 DAALIVYDVTDRNTFEDVEKWLKDLDRSSGTEDANVYLIGNKTDLVEKREV 180
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 48.0 bits (109), Expect = 1e-05
Identities = 19/52 (36%), Positives = 35/52 (67%)
Frame = +2
Query: 485 GXDGIIIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 640
G G ++VYD T +D+F+++ WLE+ +++ N+ +L+GNK DL ++ V
Sbjct: 78 GAAGALLVYDITRRDTFNHLTSWLEDARQHSNSNMVIMLIGNKSDLEARREV 129
Score = 36.7 bits (81), Expect = 0.024
Identities = 21/59 (35%), Positives = 24/59 (40%)
Frame = +1
Query: 301 VGTXCLSXXCAXDTXTDSXXXXIGXXXXXXXVNVXGNTIE*QIWDTXGQERXTTITSSY 477
VG CL IG V + G I+ QIWDT GQE +IT SY
Sbjct: 17 VGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQIWDTAGQESFRSITRSY 75
Score = 32.7 bits (71), Expect = 0.38
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 663 YAEQLGIPXLETSAKNSTNVEQAFMTMAAXIKARV 767
+A + G+ +ETSAK + NVE+AF+ A I ++
Sbjct: 137 FAREHGLVFMETSAKTAANVEEAFIDTAKEIYRKI 171
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 45.2 bits (102), Expect = 7e-05
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = +2
Query: 497 IIIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCD 619
I++VYD + Q SF + +WL EI+ YA V K+LVGNK D
Sbjct: 83 IVLVYDVSCQPSFDCLPEWLGEIESYANRRVLKILVGNKVD 123
Score = 38.7 bits (86), Expect = 0.006
Identities = 22/59 (37%), Positives = 25/59 (42%)
Frame = +1
Query: 301 VGTXCLSXXCAXDTXTDSXXXXIGXXXXXXXVNVXGNTIE*QIWDTXGQERXTTITSSY 477
VG CL IG V V + I+ QIWDT GQER +IT SY
Sbjct: 18 VGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQIWDTAGQERFRSITQSY 76
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 44.8 bits (101), Expect = 9e-05
Identities = 17/50 (34%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +2
Query: 494 GIIIVYDSTHQDSFSNVKQWLEEIDRYA-CDNVNKLLVGNKCDLTTKKVV 640
G I+++D T++ SF N++ WL ++ +A C+ + ++ GNK DL ++ V
Sbjct: 91 GFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPDIIICGNKADLENRRQV 140
Score = 39.9 bits (89), Expect = 0.003
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +3
Query: 630 KRLSTLXTAKQYAEQLGIPXLETSAKNSTNVEQAFMTMAAXIKARVGPXSTXXXLPARQD 809
+R + AKQ A+QLG+P ETSA STNVE++ + + R+ LP +
Sbjct: 137 RRQVSTARAKQLADQLGLPYFETSACTSTNVEKSVDCLLDLVMQRIQQSVETSSLPLSEC 196
Query: 810 R 812
R
Sbjct: 197 R 197
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 406 GNTIE*QIWDTXGQERXTTITSSY 477
G + Q+WDT GQER ++T+++
Sbjct: 62 GQRVLLQLWDTAGQERFRSLTTAF 85
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 44.8 bits (101), Expect = 9e-05
Identities = 17/50 (34%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +2
Query: 494 GIIIVYDSTHQDSFSNVKQWLEEIDRYA-CDNVNKLLVGNKCDLTTKKVV 640
G I+++D T++ SF N++ WL ++ +A C+ + ++ GNK DL ++ V
Sbjct: 91 GFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPDIIICGNKADLENRRQV 140
Score = 39.9 bits (89), Expect = 0.003
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +3
Query: 630 KRLSTLXTAKQYAEQLGIPXLETSAKNSTNVEQAFMTMAAXIKARVGPXSTXXXLPARQD 809
+R + AKQ A+QLG+P ETSA STNVE++ + + R+ LP +
Sbjct: 137 RRQVSTARAKQLADQLGLPYFETSACTSTNVEKSVDCLLDLVMQRIQQSVETSSLPLSEC 196
Query: 810 R 812
R
Sbjct: 197 R 197
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 406 GNTIE*QIWDTXGQERXTTITSSY 477
G + Q+WDT GQER ++T+++
Sbjct: 62 GQRVLLQLWDTAGQERFRSLTTAF 85
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +2
Query: 485 GXDGIIIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 640
G +G+++V+D T + SF VK W+ EI + L+VGNK DL ++ V
Sbjct: 84 GSNGVLLVFDITDRKSFEKVKNWVLEIKTCLGNTAEILIVGNKIDLEEERQV 135
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 630 KRLSTLXTAKQYAEQLGIPXLETSAKNSTNVEQAFMTMAA 749
+R T A+ YAE G +ETSA+++ + AF ++ A
Sbjct: 132 ERQVTRQDAEAYAESEGALYMETSAQDNVGISDAFESLTA 171
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +2
Query: 485 GXDGIIIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 640
G G ++VYD ++ NV++WL+E+ +A N+ +LVGNK DL + V
Sbjct: 83 GAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSDLRHLRAV 134
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1
Query: 367 IGXXXXXXXVNVXGNTIE*QIWDTXGQERXTTITSSY 477
IG ++V G T++ QIWDT GQER ITS+Y
Sbjct: 44 IGVEFATRSISVEGKTVKAQIWDTAGQERYRAITSAY 80
Score = 33.5 bits (73), Expect = 0.22
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +3
Query: 627 LKRLSTLXT--AKQYAEQLGIPXLETSAKNSTNVEQAFMTMAAXI 755
L+ L + T AK YAE+ + +ETSA +STNVE AF + I
Sbjct: 128 LRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEI 172
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +2
Query: 494 GIIIVYDSTHQDSFSNVKQWLEEIDRY-ACDNVNKLLVGNKCDLTTKKVV 640
G ++VY T Q +F +++ E+I R +NV LLVGNKCDL+ ++ V
Sbjct: 77 GFVVVYSITSQQTFHDIRNMKEQIVRVKGSENVPILLVGNKCDLSHQRQV 126
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +2
Query: 485 GXDGIIIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCD 619
G G ++VYD ++ NV++WL+E+ +A N+ + VGNKCD
Sbjct: 83 GAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMPVGNKCD 127
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1
Query: 367 IGXXXXXXXVNVXGNTIE*QIWDTXGQERXTTITSSY 477
IG ++V G T++ QIWDT GQER ITS+Y
Sbjct: 44 IGVEFATRSISVEGKTVKAQIWDTAGQERYRAITSAY 80
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 42.7 bits (96), Expect = 4e-04
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +2
Query: 491 DGIIIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDL 622
DG+++++D T + SF NV+ W++ + D LVGNK DL
Sbjct: 277 DGVVLMFDVTSEQSFLNVRNWIDSVRAGVDDATVMCLVGNKMDL 320
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 424 QIWDTXGQERXTTITSSY 477
Q+WDT GQER +IT Y
Sbjct: 255 QLWDTAGQERFRSITKQY 272
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 41.9 bits (94), Expect = 6e-04
Identities = 17/49 (34%), Positives = 31/49 (63%)
Frame = +2
Query: 494 GIIIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 640
G ++VYD T ++SF +++ WL ++ R ++ +L+GNK DL + V
Sbjct: 81 GALLVYDITSRESFYHLEHWLTDLQRLGDPDIVIVLIGNKSDLEADREV 129
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 41.9 bits (94), Expect = 6e-04
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +2
Query: 491 DGIIIVYDSTHQDSFSNVKQWLEEIDRYA-CDNVNKLLVGNKCDLTTKKVVDF 646
+G ++V+ SF NV + E+I R D+V +LVGNKCDL+++ VDF
Sbjct: 76 EGFLLVFAVNEAKSFENVANYREQIRRVKDSDDVPMVLVGNKCDLSSRS-VDF 127
Score = 32.3 bits (70), Expect = 0.51
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 651 TAKQYAEQLGIPXLETSAKNSTNVEQAFMTMAAXIK 758
T + A+ GIP ++TSAK V++AF T+ I+
Sbjct: 129 TVSETAKGYGIPNVDTSAKTRMGVDEAFYTLVREIR 164
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 41.9 bits (94), Expect = 6e-04
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +2
Query: 491 DGIIIVYDSTHQDSFSNVKQWLEEIDRYA-CDNVNKLLVGNKCDLTTKKVVDF 646
+G ++V+ SF NV + E+I R D+V +LVGNKCDL+++ VDF
Sbjct: 79 EGFLLVFAVNEAKSFENVANYREQIRRVKDSDDVPMVLVGNKCDLSSRS-VDF 130
Score = 32.3 bits (70), Expect = 0.51
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 651 TAKQYAEQLGIPXLETSAKNSTNVEQAFMTMAAXIK 758
T + A+ GIP ++TSAK V++AF T+ I+
Sbjct: 132 TVSETAKGYGIPNVDTSAKTRMGVDEAFYTLVREIR 167
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 41.5 bits (93), Expect = 8e-04
Identities = 16/53 (30%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Frame = +2
Query: 473 HTTXGXDGIIIVYDSTHQDSFSNVKQWLEEIDRYAC---DNVNKLLVGNKCDL 622
H + ++ VYD T ++SF+++ W++E +++ V ++L+GNKCD+
Sbjct: 169 HYYRNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRILIGNKCDV 221
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/51 (29%), Positives = 19/51 (37%)
Frame = +1
Query: 301 VGTXCLSXXCAXDTXTDSXXXXIGXXXXXXXVNVXGNTIE*QIWDTXGQER 453
VG CLS + IG + + Q+WDT GQER
Sbjct: 111 VGKTCLSFRFCCGRFPEHTEATIGVDFRERSCVIENELLRVQLWDTAGQER 161
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 41.5 bits (93), Expect = 8e-04
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +2
Query: 500 IIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 640
++VYD T+ +SF +W++++ +V +LVGNK DL+ K+ V
Sbjct: 87 VVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQV 133
Score = 32.3 bits (70), Expect = 0.51
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +1
Query: 301 VGTXCLSXXCAXDTXTDSXXXXIGXXXXXXXVNVXGNTIE*QIWDTXGQERXTTITSSY 477
VG L D+ ++ IG + + T+ Q+WDT GQER ++ SY
Sbjct: 21 VGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY 79
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 630 KRLSTLXTAKQYAEQLGIPXLETSAKNSTNVEQAFMTMAAXI 755
KR T ++ A++L + +ETSAK NV+Q F +A +
Sbjct: 130 KRQVTTDEGERKAKELNVMFIETSAKAGYNVKQLFRRIAGAL 171
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +2
Query: 494 GIIIVYDSTHQDSFSNVKQWLEEIDRYA-CDNVNKLLVGNKCDLTTKKVV 640
G ++VY T Q +F+++ ++I R D V +LVGNKCDL ++VV
Sbjct: 77 GFVLVYSITAQSTFNDLMDLRDQILRVKDTDEVPMILVGNKCDLEDERVV 126
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +2
Query: 491 DGIIIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDL 622
DG I+VYD + SF V+ W+E I ++ +LVGNK D+
Sbjct: 535 DGAILVYDVCAEQSFLRVRDWIETIKESTERSIPIILVGNKVDM 578
Score = 37.5 bits (83), Expect = 0.014
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 346 TDSXXXXIGXXXXXXXVNVXGNTIE*QIWDTXGQERXTTITSSYXXR 486
T+ +G VNV G + Q+WDT GQER ++ SY R
Sbjct: 487 TNQLPSTLGVDFHVKTVNVDGRNVALQLWDTAGQERFRSLCKSYFRR 533
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 39.9 bits (89), Expect = 0.003
Identities = 22/61 (36%), Positives = 25/61 (40%)
Frame = +1
Query: 295 MPVGTXCLSXXCAXDTXTDSXXXXIGXXXXXXXVNVXGNTIE*QIWDTXGQERXTTITSS 474
M VG CL IG + V G I+ QIWDT GQER +T S
Sbjct: 20 MGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRS 79
Query: 475 Y 477
Y
Sbjct: 80 Y 80
Score = 38.7 bits (86), Expect = 0.006
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +2
Query: 485 GXDGIIIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTKKVVDF 646
G G ++VYD T + +++++ WL + N L+GNK DL ++ V +
Sbjct: 83 GAAGALMVYDITRRSTYNHLSSWLADAKSLTNPNTAIFLIGNKADLEDQRDVPY 136
Score = 35.5 bits (78), Expect = 0.055
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +3
Query: 654 AKQYAEQLGIPXLETSAKNSTNVEQAFMTMAAXI 755
AK +AE+ G+ LE SAK +NVE AF+ A I
Sbjct: 139 AKAFAEENGLTFLECSAKTGSNVEDAFLETAKQI 172
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 39.9 bits (89), Expect = 0.003
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +1
Query: 301 VGTXCLSXXCAXDTXTDSXXXXIGXXXXXXXVNVXGNTIE*QIWDTXG 444
VG CL A DT T+S IG + + G TI+ QIWDT G
Sbjct: 22 VGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAG 69
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/47 (36%), Positives = 31/47 (65%)
Frame = +2
Query: 485 GXDGIIIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLT 625
G G ++VYD + ++ +V+QWL+ + +A +++ LVGNK DL+
Sbjct: 80 GALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKSDLS 126
Score = 33.1 bits (72), Expect = 0.29
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +3
Query: 654 AKQYAEQLGIPXLETSAKNSTNVEQAFMTMAAXI 755
AK YAE+ I +ETSA ++TNVE AF + I
Sbjct: 134 AKIYAERNHISFIETSALDNTNVEAAFTNIVTEI 167
Score = 32.3 bits (70), Expect = 0.51
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 367 IGXXXXXXXVNVXGNTIE*QIWDTXGQERXTTITSSY 477
IG ++V G ++ QIWDT G ER SSY
Sbjct: 41 IGVEFATKIISVEGKAVKVQIWDTAGMERFRCGASSY 77
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/43 (37%), Positives = 29/43 (67%)
Frame = +2
Query: 494 GIIIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDL 622
G ++VYD T + SF +++QWL ++ ++ + +L+GNK DL
Sbjct: 81 GALLVYDITCRKSFVHLEQWLSDLRQHGHPEMVIMLIGNKSDL 123
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 642 TLXTAKQYAEQLGIPXLETSAKNSTNVEQAFMTMAAXI 755
T + +A++ G+ +ETSAK + +VE+AF+ A I
Sbjct: 130 TTEEGEAFAKKNGLTFMETSAKANKHVEKAFVNTAHEI 167
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +2
Query: 500 IIVYDSTHQDSFSNVKQWLEEI-DRYACDNVNKLLVGNKCDLTTKKVV 640
++VYD T+ +SF +W++++ + CD V +LVGNK DL K+ V
Sbjct: 88 VVVYDITNANSFHQTTKWVDDVRNERGCD-VIIVLVGNKTDLADKRQV 134
Score = 31.9 bits (69), Expect = 0.67
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +1
Query: 301 VGTXCLSXXCAXDTXTDSXXXXIGXXXXXXXVNVXGNTIE*QIWDTXGQERXTTITSSY 477
VG + D+ ++ IG + + TI Q+WDT GQER ++ SY
Sbjct: 22 VGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSY 80
>U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein.
Length = 66
Score = 38.7 bits (86), Expect = 0.006
Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Frame = +2
Query: 473 HTTXGXDGIIIVYDSTHQDSFSNVKQWLEEIDRYAC---DNVNKLLVGNKC 616
H + ++ VYD T ++SF+++ W++E +++ V ++L+GNKC
Sbjct: 16 HYYRNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRILIGNKC 66
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 38.3 bits (85), Expect = 0.008
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +2
Query: 500 IIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTKKV 637
II++D T + ++ NV W ++ R C+N+ +L GNK D+ +KV
Sbjct: 86 IIMFDVTARVTYKNVPNWHRDLAR-VCENIPIVLCGNKVDVKDRKV 130
>U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein.
Length = 128
Score = 38.3 bits (85), Expect = 0.008
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +2
Query: 500 IIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTKKV 637
II++D T + ++ NV W ++ R C+N+ +L GNK D+ +KV
Sbjct: 20 IIMFDVTARVTYKNVPNWHHDLAR-VCENIPIVLCGNKVDVKDRKV 64
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 37.5 bits (83), Expect = 0.014
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +2
Query: 485 GXDGIIIVYDSTHQDSFSNVKQWLEEIDRYACDN---VNKLLVGNKCDLTTKKVV 640
G + + +VYD T+ SF N WL + + + V +L+GNK DL ++VV
Sbjct: 108 GANIVFLVYDVTNSKSFENAVDWLSVVKKNTKSSETPVKLVLMGNKTDLEERRVV 162
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 36.3 bits (80), Expect = 0.031
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 437 QXDRSGLRPSPXHTTXGXDGIIIVYDSTHQDSFSNV-KQWLEEIDRYACDNVNKLLVGNK 613
Q D LRP T D I++ + DS N+ ++W E+ R+ C NV +LVGNK
Sbjct: 63 QEDYDRLRPLSYPDT---DVILMCFSIDSPDSLENIPEKWTPEV-RHFCPNVPIILVGNK 118
Query: 614 CDL 622
DL
Sbjct: 119 RDL 121
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 36.3 bits (80), Expect = 0.031
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 437 QXDRSGLRPSPXHTTXGXDGIIIVYDSTHQDSFSNV-KQWLEEIDRYACDNVNKLLVGNK 613
Q D LRP T D I++ + DS N+ ++W E+ R+ C NV +LVGNK
Sbjct: 63 QEDYDRLRPLSYPDT---DVILMCFSIDSPDSLENIPEKWTPEV-RHFCPNVPIILVGNK 118
Query: 614 CDL 622
DL
Sbjct: 119 RDL 121
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 35.1 bits (77), Expect = 0.072
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +2
Query: 494 GIIIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTKKVVD 643
G ++V+ +F N+KQ +I V +LVGNK DL + VD
Sbjct: 77 GFVLVFSLAETSTFENLKQTFTDIIAIRGKEVPMILVGNKSDLAETRQVD 126
Score = 32.3 bits (70), Expect = 0.51
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 654 AKQYAEQLGIPXLETSAKNSTNVEQAFMTMAAXIKARVGP 773
A +AE+L IP ETSA+ + NV + F A I+ P
Sbjct: 130 AHNFAEKLKIPYFETSARLNQNVSEVFEECAVLIQKSAKP 169
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 34.3 bits (75), Expect = 0.13
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 485 GXDGIIIVYDSTHQDSFSNVKQWLEEIDRYAC----DNVNKLLVGNKCDLTTKKVVDFXY 652
G D ++ +D T+ SF ++ W +E A D+ +L+GNK DL +++ V
Sbjct: 81 GADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVLLGNKVDLESQRAVSSKR 140
Query: 653 S*AICGTAGH 682
+ + C T G+
Sbjct: 141 AQSWCQTKGN 150
Score = 31.9 bits (69), Expect = 0.67
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 367 IGXXXXXXXVNVXGNTIE*QIWDTXGQERXTTI 465
IG VN+ T+ QIWDT GQER ++
Sbjct: 42 IGADFLTRDVNIDDRTVTLQIWDTAGQERFQSL 74
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 654 AKQYAEQLG-IPXLETSAKNSTNVEQAFMTMAAXIKAR 764
A+ + + G IP E SAK + NVE AF+ +A AR
Sbjct: 141 AQSWCQTKGNIPYYEVSAKEALNVEAAFLAIARDALAR 178
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 34.3 bits (75), Expect = 0.13
Identities = 16/55 (29%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Frame = +2
Query: 494 GIIIVYDSTHQDSFSNVKQWLEEID-RYACDNVNKL---LVGNKCDLTTKKVVDF 646
G++ +YD+T+++SF +V+ W++E + +K LVG K D+ +++ V++
Sbjct: 93 GVLAIYDTTNRESFEHVENWVKEAALNLGGPSPSKCVFQLVGTKSDMDSQRQVNY 147
Score = 31.5 bits (68), Expect = 0.89
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 406 GNTIE*QIWDTXGQERXTTITSSY 477
G ++ Q+WDT GQE+ +IT SY
Sbjct: 64 GYRVKLQLWDTAGQEKFRSITKSY 87
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 33.9 bits (74), Expect = 0.17
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 630 KRLSTLXTAKQYAEQLGIPXLETSAKNSTNVEQAFMTMAAXIKARVG 770
+R+ + +Q AEQ G +ETSAK NV++ F + +K R G
Sbjct: 138 QRVVSAELCRQRAEQWGCHYVETSAKRRENVDKVFYDLMREMKRRKG 184
>AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical
protein T26C12.3 protein.
Length = 393
Score = 33.1 bits (72), Expect = 0.29
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 627 LKRLSTLXTAKQYAEQLGIPXLETSAKNSTNVEQAFMTMAAXIK 758
+KR+ T +Q A LGIP LE S+K + V +AF + + I+
Sbjct: 335 VKRVVTSFEGQQLARTLGIPFLEVSSKQNDCVFEAFEELVSLIQ 378
Score = 31.5 bits (68), Expect = 0.89
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +2
Query: 491 DGIIIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 640
+GIII+Y + SF + + + ++ N +LVG+K D+ K+VV
Sbjct: 290 NGIIIMYSVVDRQSFYHAAEIFKRLEHSREHNQPIVLVGSKKDMRVKRVV 339
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 31.5 bits (68), Expect = 0.89
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 654 AKQYAEQLGIPXLETSAKNSTNVEQAFMTMAAXIK 758
A++ A +L IP LE SAK NV++AF + ++
Sbjct: 145 AEELAHRLSIPYLECSAKIRKNVDEAFFDIVRLVR 179
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 31.5 bits (68), Expect = 0.89
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 654 AKQYAEQLGIPXLETSAKNSTNVEQAFMTMAAXIK 758
A++ A +L IP LE SAK NV++AF + ++
Sbjct: 145 AEELAHRLSIPYLECSAKIRKNVDEAFFDIVRLVR 179
>U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical
protein F20D6.8 protein.
Length = 370
Score = 31.5 bits (68), Expect = 0.89
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +2
Query: 500 IIVYDSTHQDSFSNVKQWLEEIDRYACDN---VNKLLVGNKCDLTTKKVV 640
I++Y+ ++ SF Q LE I +N + L+GNKCDL +V+
Sbjct: 248 IVMYNMDNRQSFIYATQILERITLANLNNPVPLQLFLIGNKCDLKRNQVI 297
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 31.5 bits (68), Expect = 0.89
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 654 AKQYAEQLGIPXLETSAKNSTNVEQAFMTMAAXIK 758
A++ A +L IP LE SAK NV++AF + ++
Sbjct: 145 AEELAHRLSIPYLECSAKIRKNVDEAFFDIVRLVR 179
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 31.5 bits (68), Expect = 0.89
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +2
Query: 551 WLEEIDRYACDNVNKLLVGNKCDL 622
W+ EI +YA DNV +LVG K DL
Sbjct: 98 WIPEIRKYAGDNVPIMLVGTKNDL 121
>U41276-1|AAA82469.1| 238|Caenorhabditis elegans Hypothetical
protein C52B11.5 protein.
Length = 238
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 491 DGIIIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTKKV 637
D +++ Y + +SF +K+ L + R N N +VG K D+ +V
Sbjct: 99 DAVLLFYAADDLESFKQLKENLVHVQRKIPPNANITVVGTKADVKEMQV 147
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +2
Query: 500 IIVYDSTHQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTKK 634
++V D + ++ ++ +W ID+ D + ++VGNK DL ++K
Sbjct: 84 LLVIDLSDENCVEHLIRWKGIIDKNKSDFTSTIIVGNKHDLVSEK 128
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 406 GNTIE*QIWDTXGQERXTTITSSYXXRXR 492
G +I Q+WDT GQER + +Y R
Sbjct: 53 GQSIRLQLWDTAGQERFRQLAPAYIRSAR 81
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +2
Query: 500 IIVYDSTHQDSFSNVKQWLEEIDRYAC----DNVNKLLVGNKCDLTTKKVVDFXY 652
IIV DST + + +W ++D+ V +L+ NKCD+ K D Y
Sbjct: 89 IIVLDSTRERTIEGALRWKTDLDQKVTLADGSPVPAILLANKCDIDNKLGDDKLY 143
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2
Query: 437 QXDRSGLRPSPXHTTXGXDGIIIVYDSTHQDSFSNVKQ-WLEEIDRYACDNVNKLLVGNK 613
Q D LRP T D ++ + SF NV++ W+ EI + C LLVG +
Sbjct: 61 QEDYDRLRPLSYPQT---DVFLVCFSVVAPASFENVREKWVPEISHH-CSKTPFLLVGTQ 116
Query: 614 CDL 622
DL
Sbjct: 117 VDL 119
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2
Query: 437 QXDRSGLRPSPXHTTXGXDGIIIVYDSTHQDSFSNVKQ-WLEEIDRYACDNVNKLLVGNK 613
Q D LRP T D ++ + SF NV++ W+ EI + C LLVG +
Sbjct: 61 QEDYDRLRPLSYPQT---DVFLVCFSVVAPASFENVREKWVPEISHH-CSKTPFLLVGTQ 116
Query: 614 CDL 622
DL
Sbjct: 117 VDL 119
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 188
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2
Query: 437 QXDRSGLRPSPXHTTXGXDGIIIVYDSTHQDSFSNVKQ-WLEEIDRYACDNVNKLLVGNK 613
Q D LRP T D ++ + SF NV++ W+ EI + C LLVG +
Sbjct: 58 QEDYDRLRPLSYPQT---DVFLVCFSVVAPASFENVREKWVPEISHH-CSKTPFLLVGTQ 113
Query: 614 CDL 622
DL
Sbjct: 114 VDL 116
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +2
Query: 500 IIVYDSTHQDSFSNVKQWLEEIDRYAC----DNVNKLLVGNKCDLTTKKVVDFXY 652
IIV DST + + +W ++D+ V +L+ NKCD+ K D Y
Sbjct: 89 IIVLDSTRERTIEGALRWKTDLDQKVTLADGSPVPAILLANKCDIDNKLGDDKLY 143
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = +1
Query: 301 VGTXCLSXXCAXDTXTDSXXXXIGXXXXXXXVNVXGNTIE*QIWDTXGQE 450
VG CL IG V + G I+ Q+WDT GQE
Sbjct: 17 VGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQMWDTAGQE 66
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,689,520
Number of Sequences: 27780
Number of extensions: 171730
Number of successful extensions: 452
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 449
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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