Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_C17
(960 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 37 0.025
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 37 0.025
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 37 0.025
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 37 0.025
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 37 0.025
AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical ... 34 0.13
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 33 0.30
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 33 0.30
AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical ... 33 0.40
Z83113-1|CAB05543.1| 733|Caenorhabditis elegans Hypothetical pr... 32 0.53
AF016513-1|AAB69446.1| 733|Caenorhabditis elegans Ce-LEA protein. 32 0.53
Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical pr... 32 0.70
Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical p... 31 0.93
Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical pr... 31 0.93
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 31 0.93
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 31 0.93
U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical pr... 31 0.93
AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical ... 31 0.93
U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of ... 31 1.2
D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein. 31 1.2
D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. 31 1.2
D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein. 31 1.2
D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 31 1.2
AL132877-6|CAE54913.1| 151|Caenorhabditis elegans Hypothetical ... 31 1.2
AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical ... 31 1.2
AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical ... 31 1.2
L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical p... 30 2.8
AF125962-2|AAY86293.1| 232|Caenorhabditis elegans Hypothetical ... 29 3.7
Z81077-12|CAH19097.1| 316|Caenorhabditis elegans Hypothetical p... 29 4.9
AF038606-4|AAB92026.1| 331|Caenorhabditis elegans Hypothetical ... 29 4.9
AF038606-3|AAX55701.1| 393|Caenorhabditis elegans Hypothetical ... 29 4.9
AF038606-2|AAX55700.1| 404|Caenorhabditis elegans Hypothetical ... 29 4.9
AB182367-3|BAD23998.1| 331|Caenorhabditis elegans hypothetical ... 29 4.9
AB182367-2|BAD23997.1| 393|Caenorhabditis elegans hypothetical ... 29 4.9
AB182367-1|BAD23996.1| 404|Caenorhabditis elegans hypothetical ... 29 4.9
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 29 6.5
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 29 6.5
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 29 6.5
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 29 6.5
U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocyto... 29 6.5
U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocyto... 29 6.5
L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembl... 29 6.5
AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein. 29 6.5
AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein... 29 6.5
Z81459-1|CAB03827.3| 731|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z81449-11|CAD44106.2| 410|Caenorhabditis elegans Hypothetical p... 28 8.6
Z81449-10|CAB03766.4| 419|Caenorhabditis elegans Hypothetical p... 28 8.6
Z79604-6|CAB97241.2| 731|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z48241-6|CAD44100.2| 410|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z48241-5|CAA88286.4| 419|Caenorhabditis elegans Hypothetical pr... 28 8.6
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 28 8.6
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 36.7 bits (81), Expect = 0.025
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +3
Query: 381 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 560
K E L++ + + +E+LRK V+ + ++ VQE +KL ++ +N+
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
Query: 561 QETNEKLA 584
+ET K++
Sbjct: 2604 EETRAKIS 2611
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 36.7 bits (81), Expect = 0.025
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +3
Query: 381 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 560
K E L++ + + +E+LRK V+ + ++ VQE +KL ++ +N+
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
Query: 561 QETNEKLA 584
+ET K++
Sbjct: 2604 EETRAKIS 2611
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 36.7 bits (81), Expect = 0.025
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +3
Query: 381 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 560
K E L++ + + +E+LRK V+ + ++ VQE +KL ++ +N+
Sbjct: 358 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 417
Query: 561 QETNEKLA 584
+ET K++
Sbjct: 418 EETRAKIS 425
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 36.7 bits (81), Expect = 0.025
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +3
Query: 381 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 560
K E L++ + + +E+LRK V+ + ++ VQE +KL ++ +N+
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
Query: 561 QETNEKLA 584
+ET K++
Sbjct: 2604 EETRAKIS 2611
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 36.7 bits (81), Expect = 0.025
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +3
Query: 381 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 560
K E L++ + + +E+LRK V+ + ++ VQE +KL ++ +N+
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
Query: 561 QETNEKLA 584
+ET K++
Sbjct: 2604 EETRAKIS 2611
>AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical
protein M151.2 protein.
Length = 675
Score = 34.3 bits (75), Expect = 0.13
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Frame = +3
Query: 384 AKEALEQSRQNIERTAEELRKAHPDVEKNATALRE-KLQAAVQNT-----VQESQKLAKK 545
AKEAL +QN ER EL+K ++++ +E K + A +N+ VQE+Q L +K
Sbjct: 178 AKEALAAEKQNSEREKMELKKLTEELQRMNLENKELKNRVASENSRATGAVQEAQVLQEK 237
Query: 546 VSSNVQETNEK 578
+ ++ +EK
Sbjct: 238 LQQALKALDEK 248
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 33.1 bits (72), Expect = 0.30
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +3
Query: 390 EALEQSRQNIERTAEELRKAHPDVEKNATAL---REKLQAAVQNTVQESQKLAKKVSSNV 560
EA E++R+N E ELR+ + D+ + +AL R KL+ + E +++A ++ + V
Sbjct: 1706 EAAERARRNAEAECIELREQNNDLNAHVSALTGQRRKLEGELLAAHAELEEIANELKNAV 1765
Query: 561 QETNEKLAPKIKAAYDDXXXNNH 629
++ + A + A + H
Sbjct: 1766 EQGQKASADAARLAEELRQEQEH 1788
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/67 (23%), Positives = 30/67 (44%)
Frame = +3
Query: 381 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 560
K + LEQ +E + +++ D+EK + L+ A +N + E K V + +
Sbjct: 1035 KIRNKLEQQMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQEN-IDEITKQKHDVETTL 1093
Query: 561 QETNEKL 581
+ E L
Sbjct: 1094 KRKEEDL 1100
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 33.1 bits (72), Expect = 0.30
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +3
Query: 390 EALEQSRQNIERTAEELRKAHPDVEKNATAL---REKLQAAVQNTVQESQKLAKKVSSNV 560
EA E++R+N E ELR+ + D+ + +AL R KL+ + E +++A ++ + V
Sbjct: 1706 EAAERARRNAEAECIELREQNNDLNAHVSALTGQRRKLEGELLAAHAELEEIANELKNAV 1765
Query: 561 QETNEKLAPKIKAAYDDXXXNNH 629
++ + A + A + H
Sbjct: 1766 EQGQKASADAARLAEELRQEQEH 1788
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/67 (23%), Positives = 30/67 (44%)
Frame = +3
Query: 381 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 560
K + LEQ +E + +++ D+EK + L+ A +N + E K V + +
Sbjct: 1035 KIRNKLEQQMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQEN-IDEITKQKHDVETTL 1093
Query: 561 QETNEKL 581
+ E L
Sbjct: 1094 KRKEEDL 1100
>AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical
protein Y54E10A.12 protein.
Length = 547
Score = 32.7 bits (71), Expect = 0.40
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Frame = +3
Query: 393 ALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ------AAVQNTVQESQKLAKKVSS 554
+L++ + + E+T L K +EK+ LRE+ Q A VQ ESQ+ ++
Sbjct: 141 SLKEEKASFEKTQSALLKEKGKIEKDKLMLREEAQKQASMNAEVQKKELESQERLSVLNK 200
Query: 555 NVQETNEKLAPKIKAAYDDXXXNN 626
E NEK K+K ++ N
Sbjct: 201 QFMEENEK---KVKLEQEELDSKN 221
>Z83113-1|CAB05543.1| 733|Caenorhabditis elegans Hypothetical
protein K08H10.1 protein.
Length = 733
Score = 32.3 bits (70), Expect = 0.53
Identities = 16/79 (20%), Positives = 35/79 (44%)
Frame = +3
Query: 414 NIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKI 593
N +T E L + V+++A+ ++L+ QNT ++ LA + + + E +
Sbjct: 113 NAHKTGEALNDNYESVKESASEAADRLKEPAQNTADNAKDLANQTGEEMSDAFESVKQLT 172
Query: 594 KAAYDDXXXNNHXVM*SSK 650
++ N H ++K
Sbjct: 173 SDTAENAKENAHDAADTAK 191
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/81 (19%), Positives = 32/81 (39%)
Frame = +3
Query: 366 GXANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKK 545
G A K EA + ++ ++ A D + + ++ EK+ ++ + ++ A
Sbjct: 377 GEAKDKMGEAWDHTKDKAGEAKDKASDAADDAQGKSKSMTEKIGDSISGAWESTKDTAVS 436
Query: 546 VSSNVQETNEKLAPKIKAAYD 608
E K+ I AYD
Sbjct: 437 AKDKTAEAAGKVGDSISGAYD 457
>AF016513-1|AAB69446.1| 733|Caenorhabditis elegans Ce-LEA protein.
Length = 733
Score = 32.3 bits (70), Expect = 0.53
Identities = 16/79 (20%), Positives = 35/79 (44%)
Frame = +3
Query: 414 NIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKI 593
N +T E L + V+++A+ ++L+ QNT ++ LA + + + E +
Sbjct: 113 NAHKTGEALNDNYESVKESASEAADRLKEPAQNTADNAKDLANQTGEEMSDAFESVKQLT 172
Query: 594 KAAYDDXXXNNHXVM*SSK 650
++ N H ++K
Sbjct: 173 SDTAENAKENAHDAADTAK 191
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/81 (19%), Positives = 32/81 (39%)
Frame = +3
Query: 366 GXANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKK 545
G A K EA + ++ ++ A D + + ++ EK+ ++ + ++ A
Sbjct: 377 GEAKDKMGEAWDHTKDKAGEAKDKASDAADDAQGKSKSMTEKIGDSISGAWESTKDTAVS 436
Query: 546 VSSNVQETNEKLAPKIKAAYD 608
E K+ I AYD
Sbjct: 437 AKDKTAEAAGKVGDSISGAYD 457
>Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical
protein F58G6.1 protein.
Length = 461
Score = 31.9 bits (69), Expect = 0.70
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 363 LGXANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQ 509
+G A E +Q N+ + ++ K H DV+ ++ALR L A Q
Sbjct: 24 IGKAKATQDEVFDQHAANLNKQSKSCEKLHKDVKNYSSALRTLLSAEKQ 72
>Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical
protein T05G5.9b protein.
Length = 658
Score = 31.5 bits (68), Expect = 0.93
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +3
Query: 366 GXANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKK 545
G ++G K+ ++++ + A++ +++KN TAL EKL+A + Q KK
Sbjct: 15 GSSSGGGKKLDSLPKEDLVKFAKKQVAHVAEMKKNQTALMEKLKAKMSELEQ-----VKK 69
Query: 546 VSSNVQETNEKL 581
+ N++ NEKL
Sbjct: 70 DAENLKLINEKL 81
>Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical
protein T05G5.9a protein.
Length = 660
Score = 31.5 bits (68), Expect = 0.93
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +3
Query: 366 GXANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKK 545
G ++G K+ ++++ + A++ +++KN TAL EKL+A + Q KK
Sbjct: 15 GSSSGGGKKLDSLPKEDLVKFAKKQVAHVAEMKKNQTALMEKLKAKMSELEQ-----VKK 69
Query: 546 VSSNVQETNEKL 581
+ N++ NEKL
Sbjct: 70 DAENLKLINEKL 81
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 31.5 bits (68), Expect = 0.93
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +3
Query: 396 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNE 575
L+ + +E+ EEL+K+H + + L E+ Q +Q+ + K+ SSN+ N+
Sbjct: 728 LDNHNKELEKLREELKKSHTEHTSLESVLEEQQNELAQ--LQDQLREEKEQSSNLLVLNQ 785
Query: 576 KL 581
K+
Sbjct: 786 KI 787
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 31.5 bits (68), Expect = 0.93
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +3
Query: 396 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNE 575
L+ + +E+ EEL+K+H + + L E+ Q +Q+ + K+ SSN+ N+
Sbjct: 728 LDNHNKELEKLREELKKSHTEHTSLESVLEEQQNELAQ--LQDQLREEKEQSSNLLVLNQ 785
Query: 576 KL 581
K+
Sbjct: 786 KI 787
>U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical
protein C18H2.1 protein.
Length = 1770
Score = 31.5 bits (68), Expect = 0.93
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 107 YIMAAKFVVLFACIALAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQ 280
Y K V C++ + + D +F KDI+ K+ HKTLE + + K +D Q
Sbjct: 572 YFKNNKPKVFLECVSRLRKTAI--DGENFVKDIQKTYKKSHKTLESDSSPVLKLEDPQ 627
>AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical
protein ZK973.11 protein.
Length = 447
Score = 31.5 bits (68), Expect = 0.93
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 218 KEFHKTLEQQFNSLTKSKDAQD-FSKAWKDGSESVLQ 325
+EFHKT E+ L K D + F AW DGS+ Q
Sbjct: 266 REFHKTAEEASKELRKHPDLWNRFQFAWLDGSDLASQ 302
>U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of
potassium channelsprotein 2 protein.
Length = 1564
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/67 (22%), Positives = 33/67 (49%)
Frame = +3
Query: 411 QNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPK 590
+N+++ A+ ++K KN + +K + + QK+ KK + NVQ+ +K +
Sbjct: 1276 KNVQKCAKNVQKMCKKCAKNVQKMCKKCAKMCKKCAKNVQKMCKKCAKNVQKMCKKYGLE 1335
Query: 591 IKAAYDD 611
+ +D
Sbjct: 1336 VPVYSND 1342
>D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +3
Query: 384 AKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQ 563
A+E + Q + +ER EELR D +K T + L A ++ + KL +K VQ
Sbjct: 25 AEEKVRQITEKLERVEEELR----DTQKKMTQTGDDLDKAQEDLSAATSKLEEK-EKTVQ 79
Query: 564 ETNEKLA 584
E ++A
Sbjct: 80 EAEAEVA 86
>D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +3
Query: 384 AKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQ 563
A+E + Q + +ER EELR D +K T + L A ++ + KL +K VQ
Sbjct: 25 AEEKVRQITEKLERVEEELR----DTQKKMTQTGDDLDKAQEDLSAATSKLEEK-EKTVQ 79
Query: 564 ETNEKLA 584
E ++A
Sbjct: 80 EAEAEVA 86
>D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +3
Query: 384 AKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQ 563
A+E + Q + +ER EELR D +K T + L A ++ + KL +K VQ
Sbjct: 25 AEEKVRQITEKLERVEEELR----DTQKKMTQTGDDLDKAQEDLSAATSKLEEK-EKTVQ 79
Query: 564 ETNEKLA 584
E ++A
Sbjct: 80 EAEAEVA 86
>D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +3
Query: 384 AKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQ 563
A+E + Q + +ER EELR D +K T + L A ++ + KL +K VQ
Sbjct: 25 AEEKVRQITEKLERVEEELR----DTQKKMTQTGDDLDKAQEDLSAATSKLEEK-EKTVQ 79
Query: 564 ETNEKLA 584
E ++A
Sbjct: 80 EAEAEVA 86
>AL132877-6|CAE54913.1| 151|Caenorhabditis elegans Hypothetical
protein Y105E8B.1f protein.
Length = 151
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +3
Query: 384 AKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQ 563
A+E + Q + +ER EELR D +K T + L A ++ + KL +K VQ
Sbjct: 25 AEEKVRQITEKLERVEEELR----DTQKKMTQTGDDLDKAQEDLSAATSKLEEK-EKTVQ 79
Query: 564 ETNEKLA 584
E ++A
Sbjct: 80 EAEAEVA 86
>AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1d protein.
Length = 284
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +3
Query: 384 AKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQ 563
A+E + Q + +ER EELR D +K T + L A ++ + KL +K VQ
Sbjct: 25 AEEKVRQITEKLERVEEELR----DTQKKMTQTGDDLDKAQEDLSAATSKLEEK-EKTVQ 79
Query: 564 ETNEKLA 584
E ++A
Sbjct: 80 EAEAEVA 86
>AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1a protein.
Length = 284
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +3
Query: 384 AKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQ 563
A+E + Q + +ER EELR D +K T + L A ++ + KL +K VQ
Sbjct: 25 AEEKVRQITEKLERVEEELR----DTQKKMTQTGDDLDKAQEDLSAATSKLEEK-EKTVQ 79
Query: 564 ETNEKLA 584
E ++A
Sbjct: 80 EAEAEVA 86
>L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical
protein R05D3.1 protein.
Length = 1053
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +2
Query: 161 GAMVRRDAPDFFKDIEHHTKEFH--KTLEQQFNSLTKSKDAQDFSKAWKDGSES 316
G +A ++F D++HHT F T + + +D D K W SE+
Sbjct: 519 GTSTSNEAREYFSDLDHHTVNFKYTGTTDDDAIRMAFDRDKSDERKEWIRRSEN 572
>AF125962-2|AAY86293.1| 232|Caenorhabditis elegans Hypothetical
protein Y39H10B.2 protein.
Length = 232
Score = 29.5 bits (63), Expect = 3.7
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 12/74 (16%)
Frame = +3
Query: 396 LEQSRQNIERT-------AEELRKAHPDVEKNATALREKLQAAVQNT-----VQESQKLA 539
+EQSRQ E EE ++ +++ +A R + Q ++ N+ VQ+ QKL
Sbjct: 72 MEQSRQQSEAMISQMKTQTEEFQRIVQELKDDADERRNRAQTSLDNSEYETLVQQRQKLI 131
Query: 540 KKVSSNVQETNEKL 581
+ + QET E+L
Sbjct: 132 ENSEKSQQETKEQL 145
>Z81077-12|CAH19097.1| 316|Caenorhabditis elegans Hypothetical
protein F36A2.14 protein.
Length = 316
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/50 (26%), Positives = 28/50 (56%)
Frame = +3
Query: 381 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQ 530
K+K+ SR+N ++TAE++ ++ D K A ++ + + Q V+ +
Sbjct: 94 KSKDESGSSRKNSKKTAEDMDQSSDDTTKPAEETKKTVSSKKQKKVKSEE 143
>AF038606-4|AAB92026.1| 331|Caenorhabditis elegans Hypothetical
protein C04C3.5a protein.
Length = 331
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +3
Query: 381 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 560
+A++ L+ + QNI + E+L +V + L EK++ + Q ++ AK S
Sbjct: 105 EAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERKKREYEQLQKRFAKLQSFRP 164
Query: 561 Q--ETNEKLAPKIKAAYD 608
Q + E+ ++K Y+
Sbjct: 165 QYMDEYERFEERLKKLYE 182
>AF038606-3|AAX55701.1| 393|Caenorhabditis elegans Hypothetical
protein C04C3.5c protein.
Length = 393
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +3
Query: 381 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 560
+A++ L+ + QNI + E+L +V + L EK++ + Q ++ AK S
Sbjct: 167 EAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERKKREYEQLQKRFAKLQSFRP 226
Query: 561 Q--ETNEKLAPKIKAAYD 608
Q + E+ ++K Y+
Sbjct: 227 QYMDEYERFEERLKKLYE 244
>AF038606-2|AAX55700.1| 404|Caenorhabditis elegans Hypothetical
protein C04C3.5b protein.
Length = 404
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +3
Query: 381 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 560
+A++ L+ + QNI + E+L +V + L EK++ + Q ++ AK S
Sbjct: 178 EAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERKKREYEQLQKRFAKLQSFRP 237
Query: 561 Q--ETNEKLAPKIKAAYD 608
Q + E+ ++K Y+
Sbjct: 238 QYMDEYERFEERLKKLYE 255
>AB182367-3|BAD23998.1| 331|Caenorhabditis elegans hypothetical
protein protein.
Length = 331
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +3
Query: 381 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 560
+A++ L+ + QNI + E+L +V + L EK++ + Q ++ AK S
Sbjct: 105 EAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERKKREYEQLQKRFAKLQSFRP 164
Query: 561 Q--ETNEKLAPKIKAAYD 608
Q + E+ ++K Y+
Sbjct: 165 QYMDEYERFEERLKKLYE 182
>AB182367-2|BAD23997.1| 393|Caenorhabditis elegans hypothetical
protein protein.
Length = 393
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +3
Query: 381 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 560
+A++ L+ + QNI + E+L +V + L EK++ + Q ++ AK S
Sbjct: 167 EAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERKKREYEQLQKRFAKLQSFRP 226
Query: 561 Q--ETNEKLAPKIKAAYD 608
Q + E+ ++K Y+
Sbjct: 227 QYMDEYERFEERLKKLYE 244
>AB182367-1|BAD23996.1| 404|Caenorhabditis elegans hypothetical
protein protein.
Length = 404
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +3
Query: 381 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 560
+A++ L+ + QNI + E+L +V + L EK++ + Q ++ AK S
Sbjct: 178 EAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERKKREYEQLQKRFAKLQSFRP 237
Query: 561 Q--ETNEKLAPKIKAAYD 608
Q + E+ ++K Y+
Sbjct: 238 QYMDEYERFEERLKKLYE 255
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +3
Query: 372 ANGKAKEALEQSRQNIERTAEELRKAHPDVE--KNATALREKLQAAVQNTVQESQKLAKK 545
A K Q ++++ +ELRKA + + +EKL +VQN++ E+ + K+
Sbjct: 388 AERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSLNEAHRQHKQ 447
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +3
Query: 372 ANGKAKEALEQSRQNIERTAEELRKAHPDVE--KNATALREKLQAAVQNTVQESQKLAKK 545
A K Q ++++ +ELRKA + + +EKL +VQN++ E+ + K+
Sbjct: 388 AERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSLNEAHRQHKQ 447
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +3
Query: 372 ANGKAKEALEQSRQNIERTAEELRKAHPDVE--KNATALREKLQAAVQNTVQESQKLAKK 545
A K Q ++++ +ELRKA + + +EKL +VQN++ E+ + K+
Sbjct: 148 AERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSLNEAHRQHKQ 207
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +3
Query: 372 ANGKAKEALEQSRQNIERTAEELRKAHPDVE--KNATALREKLQAAVQNTVQESQKLAKK 545
A K Q ++++ +ELRKA + + +EKL +VQN++ E+ + K+
Sbjct: 388 AERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSLNEAHRQHKQ 447
>U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform b
protein.
Length = 681
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/71 (26%), Positives = 39/71 (54%)
Frame = +3
Query: 387 KEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQE 566
KE ++ ++ E T E ++A ++ EKL AA++NT KL ++VS V++
Sbjct: 556 KETSQREQKVAELTTLERKEARDQIQM------EKLDAAIENTT----KLTEQVSDAVEK 605
Query: 567 TNEKLAPKIKA 599
+ E++ +++
Sbjct: 606 SEEEMVQILRS 616
>U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform a
protein.
Length = 751
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/71 (26%), Positives = 39/71 (54%)
Frame = +3
Query: 387 KEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQE 566
KE ++ ++ E T E ++A ++ EKL AA++NT KL ++VS V++
Sbjct: 556 KETSQREQKVAELTTLERKEARDQIQM------EKLDAAIENTT----KLTEQVSDAVEK 605
Query: 567 TNEKLAPKIKA 599
+ E++ +++
Sbjct: 606 SEEEMVQILRS 616
>L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembly
abnormal protein 4 protein.
Length = 808
Score = 28.7 bits (61), Expect = 6.5
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = +3
Query: 426 TAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAY 605
T L A V L EK+ + V N +E + KK V+E EK KIK Y
Sbjct: 336 TIAHLDYAEESVHTTKRQLEEKI-SEVNNFKKELIEEFKKCKKGVEEEFEKKFEKIKEDY 394
Query: 606 DD 611
D+
Sbjct: 395 DE 396
>AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein.
Length = 796
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/71 (26%), Positives = 39/71 (54%)
Frame = +3
Query: 387 KEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQE 566
KE ++ ++ E T E ++A ++ EKL AA++NT KL ++VS V++
Sbjct: 601 KETSQREQKVAELTTLERKEARDQIQM------EKLDAAIENTT----KLTEQVSDAVEK 650
Query: 567 TNEKLAPKIKA 599
+ E++ +++
Sbjct: 651 SEEEMVQILRS 661
>AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein
protein.
Length = 808
Score = 28.7 bits (61), Expect = 6.5
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = +3
Query: 426 TAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAY 605
T L A V L EK+ + V N +E + KK V+E EK KIK Y
Sbjct: 336 TIAHLDYAEESVHTTKRQLEEKI-SEVNNFKKELIEEFKKCKKGVEEEFEKKFEKIKEDY 394
Query: 606 DD 611
D+
Sbjct: 395 DE 396
>Z81459-1|CAB03827.3| 731|Caenorhabditis elegans Hypothetical
protein C03H12.1 protein.
Length = 731
Score = 28.3 bits (60), Expect = 8.6
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -3
Query: 205 DVLEEVGSVASHHRSLGQSDAGEEN-YELGGHDVLSRD-*VRRRCEPDCNTEECQILRDS 32
D EE + S QS+AG+EN E+ G D D V + NTE+ +ILRD
Sbjct: 23 DSFEEESHSSQESSSEQQSEAGDENKEEVEGSDEEPIDEDVIAQAVARRNTEKNRILRDC 82
Query: 31 TIVLI 17
++L+
Sbjct: 83 GVLLV 87
>Z81449-11|CAD44106.2| 410|Caenorhabditis elegans Hypothetical
protein C32A3.3b protein.
Length = 410
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/74 (25%), Positives = 34/74 (45%)
Frame = +3
Query: 381 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 560
KA E LEQ + + + + VEK + LQ V++ V E++ L+ VSS
Sbjct: 67 KAVERLEQEKHQRNQQHLKFEEELEQVEKTYRKDIDDLQQMVKSLVNENRNLSTTVSSLP 126
Query: 561 QETNEKLAPKIKAA 602
+ ++ ++ A
Sbjct: 127 NHADSPVSTSMREA 140
>Z81449-10|CAB03766.4| 419|Caenorhabditis elegans Hypothetical
protein C32A3.3a protein.
Length = 419
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/74 (25%), Positives = 34/74 (45%)
Frame = +3
Query: 381 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 560
KA E LEQ + + + + VEK + LQ V++ V E++ L+ VSS
Sbjct: 76 KAVERLEQEKHQRNQQHLKFEEELEQVEKTYRKDIDDLQQMVKSLVNENRNLSTTVSSLP 135
Query: 561 QETNEKLAPKIKAA 602
+ ++ ++ A
Sbjct: 136 NHADSPVSTSMREA 149
>Z79604-6|CAB97241.2| 731|Caenorhabditis elegans Hypothetical
protein C03H12.1 protein.
Length = 731
Score = 28.3 bits (60), Expect = 8.6
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -3
Query: 205 DVLEEVGSVASHHRSLGQSDAGEEN-YELGGHDVLSRD-*VRRRCEPDCNTEECQILRDS 32
D EE + S QS+AG+EN E+ G D D V + NTE+ +ILRD
Sbjct: 23 DSFEEESHSSQESSSEQQSEAGDENKEEVEGSDEEPIDEDVIAQAVARRNTEKNRILRDC 82
Query: 31 TIVLI 17
++L+
Sbjct: 83 GVLLV 87
>Z48241-6|CAD44100.2| 410|Caenorhabditis elegans Hypothetical
protein C32A3.3b protein.
Length = 410
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/74 (25%), Positives = 34/74 (45%)
Frame = +3
Query: 381 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 560
KA E LEQ + + + + VEK + LQ V++ V E++ L+ VSS
Sbjct: 67 KAVERLEQEKHQRNQQHLKFEEELEQVEKTYRKDIDDLQQMVKSLVNENRNLSTTVSSLP 126
Query: 561 QETNEKLAPKIKAA 602
+ ++ ++ A
Sbjct: 127 NHADSPVSTSMREA 140
>Z48241-5|CAA88286.4| 419|Caenorhabditis elegans Hypothetical
protein C32A3.3a protein.
Length = 419
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/74 (25%), Positives = 34/74 (45%)
Frame = +3
Query: 381 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 560
KA E LEQ + + + + VEK + LQ V++ V E++ L+ VSS
Sbjct: 76 KAVERLEQEKHQRNQQHLKFEEELEQVEKTYRKDIDDLQQMVKSLVNENRNLSTTVSSLP 135
Query: 561 QETNEKLAPKIKAA 602
+ ++ ++ A
Sbjct: 136 NHADSPVSTSMREA 149
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/66 (25%), Positives = 34/66 (51%)
Frame = +3
Query: 396 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNE 575
LE + TA++ ++A PD+ L + L + QNT +++A K + ++ TN+
Sbjct: 197 LEAQLKREADTAQKPKQADPDLLNKVGRLNDLLTSEKQNTRVLQEEVA-KFKAELESTNK 255
Query: 576 KLAPKI 593
+ K+
Sbjct: 256 TMKQKL 261
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,232,894
Number of Sequences: 27780
Number of extensions: 219183
Number of successful extensions: 1069
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2496624284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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