Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_C16
(952 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 36 0.032
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 36 0.032
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 36 0.056
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 35 0.074
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 33 0.23
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 33 0.23
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 33 0.23
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 33 0.23
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 32 0.69
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 32 0.69
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 30 2.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.1
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 30 2.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.1
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 30 2.8
AF039048-2|AAB94238.1| 85|Caenorhabditis elegans Hypothetical ... 30 2.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 3.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 3.7
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 3.7
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 3.7
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 29 3.7
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 3.7
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 29 4.9
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 4.9
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 4.9
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 4.9
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 4.9
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 4.9
U55364-13|AAM29677.1| 250|Caenorhabditis elegans Hypothetical p... 29 6.5
U55364-12|AAA97977.2| 260|Caenorhabditis elegans Hypothetical p... 29 6.5
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 8.5
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 36.3 bits (80), Expect = 0.032
Identities = 23/65 (35%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = -3
Query: 941 GXXGGGGXXGVWGXPAPXWXXXR--XXTGXXRSLYGGXXXXIGXXGXXGGGKGGTGXXGX 768
G GGGG G WG PA G + YGG G GGG+GG G
Sbjct: 180 GYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWGGPQQ 239
Query: 767 PXGVG 753
G G
Sbjct: 240 QQGGG 244
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 36.3 bits (80), Expect = 0.032
Identities = 23/65 (35%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = -3
Query: 941 GXXGGGGXXGVWGXPAPXWXXXR--XXTGXXRSLYGGXXXXIGXXGXXGGGKGGTGXXGX 768
G GGGG G WG PA G + YGG G GGG+GG G
Sbjct: 218 GYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWGGPQQ 277
Query: 767 PXGVG 753
G G
Sbjct: 278 QQGGG 282
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 35.5 bits (78), Expect = 0.056
Identities = 21/63 (33%), Positives = 22/63 (34%)
Frame = -3
Query: 941 GXXGGGGXXGVWGXPAPXWXXXRXXTGXXRSLYGGXXXXIGXXGXXGGGKGGTGXXGXPX 762
G GG G G WG P W +G GG G G G GG G G
Sbjct: 38 GRSGGWGRPG-WGGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGG 96
Query: 761 GVG 753
G G
Sbjct: 97 GGG 99
Score = 32.7 bits (71), Expect = 0.40
Identities = 21/60 (35%), Positives = 23/60 (38%)
Frame = -3
Query: 932 GGGGXXGVWGXPAPXWXXXRXXTGXXRSLYGGXXXXIGXXGXXGGGKGGTGXXGXPXGVG 753
GGGG G W R G + GG G G GGG+GG G G G G
Sbjct: 49 GGGGPGWGRGGGGSGWGGGRGG-GWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGG 107
Score = 31.9 bits (69), Expect = 0.69
Identities = 23/68 (33%), Positives = 24/68 (35%), Gaps = 8/68 (11%)
Frame = -3
Query: 926 GGXXGVWGXP-----APXWXXXRXXTGXXRSLYGGXXXXIG---XXGXXGGGKGGTGXXG 771
GG G WG P P W +G GG G G GGG GG G G
Sbjct: 37 GGRSGGWGRPGWGGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGG 96
Query: 770 XPXGVGXR 747
G G R
Sbjct: 97 GGGGGGGR 104
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/65 (33%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Frame = -3
Query: 941 GXXGGGGXXGVWGXPAPX--WXXXRXXTGXXRSLYGGXXXXIGXXGXXGGGKGGTGXXGX 768
G GGG G WG W G GG G G GGG+GG G G
Sbjct: 61 GSGWGGGRGGGWGNNGGGGNWGG-NGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGG 119
Query: 767 PXGVG 753
G G
Sbjct: 120 GRGGG 124
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 35.1 bits (77), Expect = 0.074
Identities = 22/63 (34%), Positives = 23/63 (36%)
Frame = -3
Query: 941 GXXGGGGXXGVWGXPAPXWXXXRXXTGXXRSLYGGXXXXIGXXGXXGGGKGGTGXXGXPX 762
G GGGG G +G G YGG G G GGG GG G G
Sbjct: 151 GYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGM 210
Query: 761 GVG 753
G G
Sbjct: 211 GGG 213
Score = 34.3 bits (75), Expect = 0.13
Identities = 21/62 (33%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = -3
Query: 941 GXXGGGGXXGVWGXPAPXWXXXRXXTGXXRSLYGG-XXXXIGXXGXXGGGKGGTGXXGXP 765
G GGGG G+ G P G +GG +G G GGG GG G G
Sbjct: 130 GGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFG 189
Query: 764 XG 759
G
Sbjct: 190 GG 191
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 33.5 bits (73), Expect = 0.23
Identities = 22/61 (36%), Positives = 24/61 (39%)
Frame = -3
Query: 941 GXXGGGGXXGVWGXPAPXWXXXRXXTGXXRSLYGGXXXXIGXXGXXGGGKGGTGXXGXPX 762
G GG G G +G R G R GG G G GGG+GGTG G
Sbjct: 77 GRGGGRGGNGGFGDNG----GLRGGNGGGRGGNGGFDDNGGGRGGNGGGRGGTGGFGDNG 132
Query: 761 G 759
G
Sbjct: 133 G 133
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/59 (33%), Positives = 21/59 (35%)
Frame = -3
Query: 929 GGGXXGVWGXPAPXWXXXRXXTGXXRSLYGGXXXXIGXXGXXGGGKGGTGXXGXPXGVG 753
GGG G G R G R GG G G GGG+GG G G G
Sbjct: 99 GGGRGGNGGFDDNG--GGRGGNGGGRGGTGGFGDNGGGRGGNGGGRGGNGGGNNGGGRG 155
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 33.5 bits (73), Expect = 0.23
Identities = 23/65 (35%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = -3
Query: 941 GXXGGGGXXGVWGXPAPXWXXXR--XXTGXXRSLYGGXXXXIGXXGXXGGGKGGTGXXGX 768
G GGGG G WG PA G + YGG G GGG+GG G
Sbjct: 218 GYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGG-GWGQQGGGGQGGWGGPQQ 276
Query: 767 PXGVG 753
G G
Sbjct: 277 QQGGG 281
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/59 (32%), Positives = 21/59 (35%)
Frame = -3
Query: 941 GXXGGGGXXGVWGXPAPXWXXXRXXTGXXRSLYGGXXXXIGXXGXXGGGKGGTGXXGXP 765
G GGGG G G W G + +GG G G G GG G G P
Sbjct: 242 GGPGGGGQGGYGGDYGGGWGQQG---GGGQGGWGGPQQQQGGGGWGQQGGGGQGGWGGP 297
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 33.5 bits (73), Expect = 0.23
Identities = 23/65 (35%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = -3
Query: 941 GXXGGGGXXGVWGXPAPXWXXXR--XXTGXXRSLYGGXXXXIGXXGXXGGGKGGTGXXGX 768
G GGGG G WG PA G + YGG G GGG+GG G
Sbjct: 180 GYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGG-GWGQQGGGGQGGWGGPQQ 238
Query: 767 PXGVG 753
G G
Sbjct: 239 QQGGG 243
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/59 (32%), Positives = 21/59 (35%)
Frame = -3
Query: 941 GXXGGGGXXGVWGXPAPXWXXXRXXTGXXRSLYGGXXXXIGXXGXXGGGKGGTGXXGXP 765
G GGGG G G W G + +GG G G G GG G G P
Sbjct: 204 GGPGGGGQGGYGGDYGGGWGQQG---GGGQGGWGGPQQQQGGGGWGQQGGGGQGGWGGP 259
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 33.5 bits (73), Expect = 0.23
Identities = 23/65 (35%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = -3
Query: 941 GXXGGGGXXGVWGXPAPXWXXXR--XXTGXXRSLYGGXXXXIGXXGXXGGGKGGTGXXGX 768
G GGGG G WG PA G + YGG G GGG+GG G
Sbjct: 218 GYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGG-GWGQQGGGGQGGWGGPQQ 276
Query: 767 PXGVG 753
G G
Sbjct: 277 QQGGG 281
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/59 (32%), Positives = 21/59 (35%)
Frame = -3
Query: 941 GXXGGGGXXGVWGXPAPXWXXXRXXTGXXRSLYGGXXXXIGXXGXXGGGKGGTGXXGXP 765
G GGGG G G W G + +GG G G G GG G G P
Sbjct: 242 GGPGGGGQGGYGGDYGGGWGQQG---GGGQGGWGGPQQQQGGGGWGQQGGGGQGGWGGP 297
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.9 bits (69), Expect = 0.69
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = +1
Query: 760 PXGXPXXPVPPFPPPXXPXXPIXXXXPP*RDLXXPVXXRXXXQXGAGXPQTPXXPPP 930
P P P PP PP PI PP P GAG P P PPP
Sbjct: 605 PHAVPPPPPPP-PPQSFGMAPISSAAPP---PPPPPPPMGLPAVGAGAPPPPPPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.9 bits (69), Expect = 0.69
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = +1
Query: 760 PXGXPXXPVPPFPPPXXPXXPIXXXXPP*RDLXXPVXXRXXXQXGAGXPQTPXXPPP 930
P P P PP PP PI PP P GAG P P PPP
Sbjct: 431 PHAVPPPPPPP-PPQSFGMAPISSAAPP---PPPPPPPMGLPAVGAGAPPPPPPPPP 483
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/63 (30%), Positives = 20/63 (31%)
Frame = +1
Query: 754 PTPXGXPXXPVPPFPPPXXPXXPIXXXXPP*RDLXXPVXXRXXXQXGAGXPQTPXXPPPP 933
P P P P PPP P PP P+ AG P PPPP
Sbjct: 524 PMPGMAPLSTGAPTPPPPPPVGMANGGPPP----PPPLPLDLLKGAVAGLKSVPGGPPPP 579
Query: 934 XXP 942
P
Sbjct: 580 PPP 582
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/72 (30%), Positives = 24/72 (33%), Gaps = 8/72 (11%)
Frame = +1
Query: 754 PTPXGXPXXPVPPFPPPXXPXXPIXXXXPP*RDLXXPVXXRXXXQXGAGXPQTP------ 915
P P P PP PPP P+ PP P+ GA P P
Sbjct: 492 PMPSINGHAPNPPPPPPLLGIAPMSTNAPP----PPPMPGMAPLSTGAPTPPPPPPVGMA 547
Query: 916 --XXPPPPXXPL 945
PPPP PL
Sbjct: 548 NGGPPPPPPLPL 559
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/51 (29%), Positives = 18/51 (35%)
Frame = +1
Query: 781 PVPPFPPPXXPXXPIXXXXPP*RDLXXPVXXRXXXQXGAGXPQTPXXPPPP 933
P PP PPP P P+ PP PV + + PP P
Sbjct: 177 PPPPRPPPQEPPKPVEQAAPPPPPAPMPVPVEKAPEPVPAPVEQIAPPPAP 227
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = +1
Query: 754 PTPXGXPXXPVPPFPPPXXPXXPIXXXXPP*RDLXXPVXXRXXXQXGAGXPQTPXXPPPP 933
P+P P P P PPP P P P P P P PPP
Sbjct: 76 PSPSCCPYVPPAPLPPPPPPASPCCGPSPVPAPCCPP-------PPAPAAPCCPPPPPPT 128
Query: 934 XXPL 945
PL
Sbjct: 129 PSPL 132
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/68 (32%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Frame = +1
Query: 754 PTPXGXPXXPVPPFPPPXXPXXPIXXXXPP*RDLXXPVXXRXXXQXGAGXPQTP--XXPP 927
P P P PP PPP PI PP P G P P PP
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPP----PPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 928 PPXXPLXG 951
PP P G
Sbjct: 771 PPPPPPPG 778
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/68 (32%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Frame = +1
Query: 754 PTPXGXPXXPVPPFPPPXXPXXPIXXXXPP*RDLXXPVXXRXXXQXGAGXPQTP--XXPP 927
P P P PP PPP PI PP P G P P PP
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPP----PPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 928 PPXXPLXG 951
PP P G
Sbjct: 771 PPPPPPPG 778
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/57 (33%), Positives = 21/57 (36%)
Frame = -3
Query: 941 GXXGGGGXXGVWGXPAPXWXXXRXXTGXXRSLYGGXXXXIGXXGXXGGGKGGTGXXG 771
G GGGG G +G W R +GG G G GGG G G G
Sbjct: 216 GGGGGGGGGGGYGSGG-GWGGGGGGRDRDRGGWGGGGGGRGYGGGGGGGGYGYGGGG 271
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/68 (32%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Frame = +1
Query: 754 PTPXGXPXXPVPPFPPPXXPXXPIXXXXPP*RDLXXPVXXRXXXQXGAGXPQTP--XXPP 927
P P P PP PPP PI PP P G P P PP
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPP----PPPPGGLPPISGGPPPPPPPPGGCPP 353
Query: 928 PPXXPLXG 951
PP P G
Sbjct: 354 PPPPPPPG 361
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/65 (30%), Positives = 22/65 (33%)
Frame = -3
Query: 941 GXXGGGGXXGVWGXPAPXWXXXRXXTGXXRSLYGGXXXXIGXXGXXGGGKGGTGXXGXPX 762
G GGG G +G G GG G G GGG+GG G G
Sbjct: 13 GGSSGGGSRGGYGGGGRGGGGGGYSGGRGGGYGGGGGGGYGGGGYGGGGRGG-GRGGSNG 71
Query: 761 GVGXR 747
G R
Sbjct: 72 SAGGR 76
>AF039048-2|AAB94238.1| 85|Caenorhabditis elegans Hypothetical
protein F16B4.7 protein.
Length = 85
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/51 (33%), Positives = 21/51 (41%)
Frame = -3
Query: 941 GXXGGGGXXGVWGXPAPXWXXXRXXTGXXRSLYGGXXXXIGXXGXXGGGKG 789
G GGGG G WG + + + G + GG G G GGG G
Sbjct: 36 GDFGGGGSGGQWGSQSSSFQQSQSSGGFQNNAGGGFG---GGMGPGGGGWG 83
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/59 (30%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Frame = +1
Query: 760 PXGXPXXPVPPFPPPXXPXXPIXXXXPP*RDL-XXPVXXRXXXQXGAGXPQTPXXPPPP 933
P P V P PPP P + PP P G P P PPPP
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/60 (31%), Positives = 22/60 (36%)
Frame = +1
Query: 754 PTPXGXPXXPVPPFPPPXXPXXPIXXXXPP*RDLXXPVXXRXXXQXGAGXPQTPXXPPPP 933
P P P P P PPP P P+ P R P + P +P PPPP
Sbjct: 141 PPPPRVPRTPPPRSPPPRRP--PMTPPSPQRRPPRTP--PSPEPRNPPRTPPSPIPPPPP 196
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 3/54 (5%)
Frame = +3
Query: 789 PLSPPXXTPXANXXXXPPVKGPXXARXXPXRTPXXGRXXPNXPGP---PPXXXP 941
P PP A PP P R P R+P R P P PP P
Sbjct: 123 PPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPP 176
Score = 28.3 bits (60), Expect = 8.5
Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 6/58 (10%)
Frame = +1
Query: 787 PPFPPPXXPXXPIXXXXPP*R-DLXXPVXXRXXXQ-----XGAGXPQTPXXPPPPXXP 942
PP PPP P P PP R + P R + P+TP P PP P
Sbjct: 139 PPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPP 196
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/55 (32%), Positives = 21/55 (38%)
Frame = +1
Query: 781 PVPPFPPPXXPXXPIXXXXPP*RDLXXPVXXRXXXQXGAGXPQTPXXPPPPXXPL 945
P PP PPP P+ PP + P Q P P PPPP P+
Sbjct: 29 PCPPPPPPMCAPPPLPCPPPP---ICPP-------QFCPPPPMCPPPPPPPPPPM 73
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +1
Query: 796 PPPXXPXXPIXXXXPP*RDLXXPVXXRXXXQXGAGXPQTPXXPPPPXXP 942
PPP P P PP P+ P P PPPP P
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCP 75
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/59 (30%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Frame = +1
Query: 760 PXGXPXXPVPPFPPPXXPXXPIXXXXPP*RDL-XXPVXXRXXXQXGAGXPQTPXXPPPP 933
P P V P PPP P + PP P G P P PPPP
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = -3
Query: 941 GXXGGGGXXGVWGXPAPXWXXXRXXTGXXRSLYGGXXXXIGXXGXXGGGKGGTG 780
G GG G G +G R G R YGG G G GGG G G
Sbjct: 293 GERGGRGGRGGFGGGRGGPMGGRGGFGGDRGGYGGGGGRGGFDGGRGGGGGFRG 346
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/55 (34%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Frame = -3
Query: 932 GGGGXXGVWGXPAPX-WXXXRXXTGXXRSLYGGXXXXIGXXGXXGGGKGGTGXXG 771
GGGG G WG W G +GG G G GGG+G G G
Sbjct: 41 GGGGGPGGWGNNGGGGWGRGGGRGGGD---WGGNNGGGGNWGGNGGGRGDWGGNG 92
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/61 (32%), Positives = 22/61 (36%)
Frame = -3
Query: 941 GXXGGGGXXGVWGXPAPXWXXXRXXTGXXRSLYGGXXXXIGXXGXXGGGKGGTGXXGXPX 762
G GGGG G G + G R GG G GG +GG G G P
Sbjct: 28 GGFGGGGRGGYGGGDRGSFGGG--DRGGFRGGRGGGDRGGFRGGRGGGDRGGFGGRGSPR 85
Query: 761 G 759
G
Sbjct: 86 G 86
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = +1
Query: 754 PTPXGXPXXPVPPFPPPXXPXXPIXXXXPP*RDLXXPVXXRXXXQXGAGXPQTPXXPPPP 933
P P P P PPP P+ P PV GAG P P PPPP
Sbjct: 206 PLTSNIPQAPPAP-PPPIGGIAPVNAHGAPPPPPLPPV--------GAGAPPPPPPPPPP 256
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.1 bits (62), Expect = 4.9
Identities = 22/65 (33%), Positives = 22/65 (33%), Gaps = 5/65 (7%)
Frame = +1
Query: 754 PTPXGXPXXPVPPF-----PPPXXPXXPIXXXXPP*RDLXXPVXXRXXXQXGAGXPQTPX 918
P P G P P F PPP P P PP R P G P P
Sbjct: 298 PPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPP-RGFMPPPHPMMFR----GGPYPPF 352
Query: 919 XPPPP 933
PPPP
Sbjct: 353 FPPPP 357
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.1 bits (62), Expect = 4.9
Identities = 22/65 (33%), Positives = 22/65 (33%), Gaps = 5/65 (7%)
Frame = +1
Query: 754 PTPXGXPXXPVPPF-----PPPXXPXXPIXXXXPP*RDLXXPVXXRXXXQXGAGXPQTPX 918
P P G P P F PPP P P PP R P G P P
Sbjct: 298 PPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPP-RGFMPPPHPMMFR----GGPYPPF 352
Query: 919 XPPPP 933
PPPP
Sbjct: 353 FPPPP 357
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = +1
Query: 754 PTPXGXPXXPVPPFPPPXXPXXPIXXXXPP*RDLXXPVXXRXXXQXGAGXPQTPXXPPPP 933
P P P P PPP P+ P PV GAG P P PPPP
Sbjct: 192 PLTSNIPQAPPAP-PPPIGGIAPVNAHGAPPPPPLPPV--------GAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = +1
Query: 754 PTPXGXPXXPVPPFPPPXXPXXPIXXXXPP*RDLXXPVXXRXXXQXGAGXPQTPXXPPPP 933
P P P P PPP P+ P PV GAG P P PPPP
Sbjct: 192 PLTSNIPQAPPAP-PPPIGGIAPVNAHGAPPPPPLPPV--------GAGAPPPPPPPPPP 242
>U55364-13|AAM29677.1| 250|Caenorhabditis elegans Hypothetical
protein F21C10.3b protein.
Length = 250
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 821 GXXGXXGGGKGGTGXXGXPXGVG 753
G G GGG+GG G G GVG
Sbjct: 28 GGGGRGGGGRGGRGRSGARSGVG 50
>U55364-12|AAA97977.2| 260|Caenorhabditis elegans Hypothetical
protein F21C10.3a protein.
Length = 260
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 821 GXXGXXGGGKGGTGXXGXPXGVG 753
G G GGG+GG G G GVG
Sbjct: 28 GGGGRGGGGRGGRGRSGARSGVG 50
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 754 PTPXGXPXXPVPPFPPPXXPXXPIXXXXPP 843
P P P PP PPP P P PP
Sbjct: 123 PAPAPYQQQPPPPPPPPHYPPPPPHYPPPP 152
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,518,351
Number of Sequences: 27780
Number of extensions: 138900
Number of successful extensions: 1531
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1269
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2465154230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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