Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_C14
         (917 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    32   0.73 
02_05_0686 - 30900748-30902167,30903442-30904742                       31   0.97 
12_02_1174 - 26696869-26698191                                         31   1.3  
07_01_0080 + 587674-588510                                             29   3.9  
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504...    29   5.2  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   6.8  

>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 31.9 bits (69), Expect = 0.73
 Identities = 14/45 (31%), Positives = 14/45 (31%)
 Frame = +2

Query: 737  PXXPPPXXXXPXXXPXXXGGGXPXXXXXXPRXPPXXPPXXPPXXP 871
            P   PP    P   P       P      P  PP  PP  PP  P
Sbjct: 1133 PLDAPPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSP 1177



 Score = 28.3 bits (60), Expect = 9.0
 Identities = 15/45 (33%), Positives = 15/45 (33%)
 Frame = +2

Query: 737  PXXPPPXXXXPXXXPXXXGGGXPXXXXXXPRXPPXXPPXXPPXXP 871
            P  PPP        P    G  P      P  PP  PP  PP  P
Sbjct: 1126 PDGPPPLPLDAPPPPPLPEGPPPLPSDSPPCQPP-LPPSPPPATP 1169


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 31.5 bits (68), Expect = 0.97
 Identities = 18/60 (30%), Positives = 18/60 (30%)
 Frame = +2

Query: 737 PXXPPPXXXXPXXXPXXXGGGXPXXXXXXPRXPPXXPPXXPPXXPXXXXXXXXXPXXPXG 916
           P  PPP    P   P   G   P      P  PP   P  PP  P         P  P G
Sbjct: 326 PPPPPPPKAAPPPPPPK-GPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKG 384



 Score = 29.1 bits (62), Expect = 5.2
 Identities = 17/69 (24%), Positives = 17/69 (24%)
 Frame = +1

Query: 706 PXXXPXXXXXXXXPPPPGXXXXXXPXXXXGGXPXXXXXXXXXXPRXXPXXPPPXXXPXXX 885
           P   P        PPPP       P    G  P          P      PPP   P   
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGK 373

Query: 886 XXXXPXXPP 912
               P  PP
Sbjct: 374 KGGPPPPPP 382


>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 14/45 (31%), Positives = 15/45 (33%)
 Frame = +2

Query: 737 PXXPPPXXXXPXXXPXXXGGGXPXXXXXXPRXPPXXPPXXPPXXP 871
           P  PPP    P   P       P      P+ PP   P  PP  P
Sbjct: 150 PSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPP 194



 Score = 28.7 bits (61), Expect = 6.8
 Identities = 14/45 (31%), Positives = 14/45 (31%)
 Frame = +2

Query: 737 PXXPPPXXXXPXXXPXXXGGGXPXXXXXXPRXPPXXPPXXPPXXP 871
           P  PPP        P       P      P  PP  PP  PP  P
Sbjct: 124 PPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPP 168


>07_01_0080 + 587674-588510
          Length = 278

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = -3

Query: 546 PXXXPPXPGGGAXXXXXXXPPXPPPGP 466
           P   PP P  G+       PP PPP P
Sbjct: 92  PPPPPPPPSSGSPPPPPPPPPPPPPPP 118


>07_01_0674 +
           5047503-5047646,5047808-5047901,5048743-5048828,
           5049380-5049429,5049517-5049586,5049668-5049749,
           5049867-5050267,5050414-5050941,5051823-5052044
          Length = 558

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = -3

Query: 546 PXXXPPXPGGGAXXXXXXXPPXPPPGPG 463
           P   PP P   A       PP PPP PG
Sbjct: 232 PPPPPPKPANIAGAPGLPLPPPPPPPPG 259


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = -3

Query: 546 PXXXPPXPGGGAXXXXXXXPPXPPPGP 466
           P   PP P G         PP PPP P
Sbjct: 547 PPPPPPPPSGNKPAFSPPPPPPPPPPP 573


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,473,516
Number of Sequences: 37544
Number of extensions: 295654
Number of successful extensions: 2148
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1604
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)