Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_C14
(917 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 0.87
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 31 1.2
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.7
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 6.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 6.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 6.2
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 8.1
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 8.1
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.5 bits (68), Expect = 0.87
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = -3
Query: 909 GXXGXXXXXXXXXGXXGGXXGGXXGGXRGXXXXXXGXPPPXXXGXXXGXXXXGGGXXG 736
G G G GG GG GG G G PP G GGG G
Sbjct: 73 GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCG 130
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/58 (29%), Positives = 17/58 (29%)
Frame = -3
Query: 909 GXXGXXXXXXXXXGXXGGXXGGXXGGXRGXXXXXXGXPPPXXXGXXXGXXXXGGGXXG 736
G G G GG GG G G PPP G GGG G
Sbjct: 74 GGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGG 131
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = -3
Query: 909 GXXGXXXXXXXXXGXXGGXXGGXXGGXRGXXXXXXGXPPPXXXGXXXGXXXXGGGXXG 736
G G G GG GG GG G G PP G GGG G
Sbjct: 110 GGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGG 167
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 552 GAPXXXPPXPGGGAXXXXXXXPPXPPPGPGXXXXXP 445
G P PP PGG PP PPP PG P
Sbjct: 756 GGPPPPPPPPGG-------CPPPPPPPPPGGFKGGP 784
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 534 PPXPGGGAXXXXXXXPPXPPPG 469
PP P GG PP PPPG
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPG 749
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 534 PPXPGGGAXXXXXXXPPXPPPGPGXXXXXP 445
PP P G PP PPP PG P
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 552 GAPXXXPPXPGGGAXXXXXXXPPXPPPG 469
G P PP PGG PP PPPG
Sbjct: 740 GGPPPPPP-PGGLPPISGGPPPPPPPPG 766
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 552 GAPXXXPPXPGGGAXXXXXXXPPXPPPG 469
G P PP P GG PP PPPG
Sbjct: 767 GCPPPPPPPPPGG---FKGGPPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 552 GAPXXXPPXPGGGAXXXXXXXPPXPPPGPGXXXXXP 445
G P PP PGG PP PPP PG P
Sbjct: 756 GGPPPPPPPPGG-------CPPPPPPPPPGGFKGGP 784
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 534 PPXPGGGAXXXXXXXPPXPPPG 469
PP P GG PP PPPG
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPG 749
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 534 PPXPGGGAXXXXXXXPPXPPPGPGXXXXXP 445
PP P G PP PPP PG P
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 552 GAPXXXPPXPGGGAXXXXXXXPPXPPPG 469
G P PP PGG PP PPPG
Sbjct: 740 GGPPPPPP-PGGLPPISGGPPPPPPPPG 766
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 552 GAPXXXPPXPGGGAXXXXXXXPPXPPPG 469
G P PP P GG PP PPPG
Sbjct: 767 GCPPPPPPPPPGG---FKGGPPPPPPPG 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 552 GAPXXXPPXPGGGAXXXXXXXPPXPPPGPGXXXXXP 445
G P PP PGG PP PPP PG P
Sbjct: 339 GGPPPPPPPPGG-------CPPPPPPPPPGGFKGGP 367
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 534 PPXPGGGAXXXXXXXPPXPPPG 469
PP P GG PP PPPG
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPG 332
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 534 PPXPGGGAXXXXXXXPPXPPPGPGXXXXXP 445
PP P G PP PPP PG P
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 552 GAPXXXPPXPGGGAXXXXXXXPPXPPPG 469
G P PP PGG PP PPPG
Sbjct: 323 GGPPPPPP-PGGLPPISGGPPPPPPPPG 349
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 552 GAPXXXPPXPGGGAXXXXXXXPPXPPPG 469
G P PP P GG PP PPPG
Sbjct: 350 GCPPPPPPPPPGG---FKGGPPPPPPPG 374
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -3
Query: 870 GXXGGXXGGXXGGXRGXXXXXXGXPPPXXXGXXXGXXXXGGG 745
G GG GG GG G P P G G GGG
Sbjct: 28 GGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGG 69
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -3
Query: 870 GXXGGXXGGXXGGXRGXXXXXXGXPPPXXXGXXXGXXXXGGG 745
G GG GG GG G P P G G GGG
Sbjct: 28 GGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGG 69
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/56 (26%), Positives = 15/56 (26%)
Frame = +1
Query: 745 PPPPGXXXXXXPXXXXGGXPXXXXXXXXXXPRXXPXXPPPXXXPXXXXXXXPXXPP 912
PPPP P G P PR PPP P PP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/56 (26%), Positives = 15/56 (26%)
Frame = +1
Query: 745 PPPPGXXXXXXPXXXXGGXPXXXXXXXXXXPRXXPXXPPPXXXPXXXXXXXPXXPP 912
PPPP P G P PR PPP P PP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/56 (26%), Positives = 15/56 (26%)
Frame = +1
Query: 745 PPPPGXXXXXXPXXXXGGXPXXXXXXXXXXPRXXPXXPPPXXXPXXXXXXXPXXPP 912
PPPP P G P PR PPP P PP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 549 APXXXPPXPGGGAXXXXXXXPPXPPPGP 466
AP PP P G PP PPP P
Sbjct: 629 APPPPPPPPPMGLPAVGAGAPPPPPPPP 656
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 549 APXXXPPXPGGGAXXXXXXXPPXPPPGP 466
AP PP P G PP PPP P
Sbjct: 455 APPPPPPPPPMGLPAVGAGAPPPPPPPP 482
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,026,559
Number of Sequences: 27780
Number of extensions: 194706
Number of successful extensions: 1126
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 932
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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