Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_C12
         (912 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0376 - 2934115-2934603                                           29   3.9  
09_04_0687 + 19465594-19465780,19465994-19466022,19466731-194668...    29   3.9  
06_01_1010 + 7866158-7866661                                           29   3.9  
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350...    29   6.8  
01_06_0705 + 31342236-31342415,31343086-31343391,31343555-313437...    29   6.8  
02_05_0700 + 31018480-31019832                                         28   9.0  

>12_01_0376 - 2934115-2934603
          Length = 162

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2

Query: 656 QRWRNPTGL*RSXAFPPWXPP 718
           + WR P    RS A PPW PP
Sbjct: 36  RHWRTPPKRARSSAAPPWAPP 56


>09_04_0687 +
           19465594-19465780,19465994-19466022,19466731-19466803,
           19467237-19467311,19467583-19467644,19467727-19467795,
           19468447-19468475,19468553-19468760,19468867-19469100,
           19469591-19470598
          Length = 657

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 675 QDYKDPXRSPPGSPLVRSPVPTLP 746
           QD+  P ++PP +P   SP+PT P
Sbjct: 570 QDHFRPRQTPPSAPQTASPLPTPP 593


>06_01_1010 + 7866158-7866661
          Length = 167

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
 Frame = -2

Query: 800 GKGPRFPXGRKADRYXGKRQGRNR-RAHEGAXRGGTPGIFIVLSGFATSDLSVDFCDARX 624
           G G R P   K  R+  +  G+ R R   G   GG PG+  V  G   SD   D   A  
Sbjct: 64  GGGARAPGSGKGRRWRPEHGGKRRHRRRTGRKEGGEPGVGAVTVG---SDEDDDGSAAAR 120

Query: 623 GGR 615
            GR
Sbjct: 121 SGR 123


>01_07_0021 -
           40533864-40534583,40534779-40534814,40534909-40535048,
           40535837-40535922,40536430-40536653,40536770-40536865,
           40538766-40538833,40539945-40540055,40540799-40540955
          Length = 545

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
 Frame = +3

Query: 687 DPXRSPPGSPLVRS--PVPTLPLTGIPVRLSP 776
           DP   PP  P   S  P+P+ P  G+PV   P
Sbjct: 452 DPPPVPPPPPTTGSFMPIPSAPFAGLPVPAGP 483


>01_06_0705 + 31342236-31342415,31343086-31343391,31343555-31343796,
            31343927-31344122,31344419-31344602,31344984-31345147,
            31345454-31345981,31346530-31346630,31347619-31347634,
            31347834-31347941,31348028-31348078,31349059-31349100,
            31349442-31349541,31350039-31350256,31350367-31350807,
            31350916-31351043,31351131-31351992
          Length = 1288

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +1

Query: 673  DRTIKIPGVPPLXAPSCALLFRPCRLPXYLSAFLPFGKR 789
            DRTI    +PP   P   L+     +P Y   F+PF +R
Sbjct: 1067 DRTIGTFKMPPASLPIIPLIVLVFAVPIYERGFVPFARR 1105


>02_05_0700 + 31018480-31019832
          Length = 450

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +3

Query: 690 PXRSPPGSPLVRSPVPTLPLTG 755
           P   PPG PL   P+P  PL G
Sbjct: 37  PGEKPPGQPLPGQPLPGQPLPG 58


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,938,747
Number of Sequences: 37544
Number of extensions: 361436
Number of successful extensions: 1192
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1189
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)