Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_C11
         (887 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0154 - 1775693-1775942,1776834-1777588                           31   0.93 
02_02_0498 - 10973243-10973345,10973850-10973882,10974104-109741...    31   0.93 
04_04_1107 - 30954647-30954769,30955052-30955141,30955309-309556...    29   4.9  
02_02_0691 + 12999452-12999820                                         29   4.9  
11_04_0183 + 14642037-14642069,14642099-14642220,14642791-146429...    28   8.6  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.6  
05_04_0268 - 19574540-19574582,19574664-19574755,19574843-195749...    28   8.6  

>04_01_0154 - 1775693-1775942,1776834-1777588
          Length = 334

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 20/51 (39%), Positives = 27/51 (52%)
 Frame = -2

Query: 775 GANDLHPN*DTYSVSYEKAPRFPXREKGGQVSGKRQGRKQESAPRELXRGK 623
           GA+ + P+ D  S   + APR P RE+GG   G    R+  S+ R   RGK
Sbjct: 55  GADAVAPDADPASPVEDLAPRRPDRERGG---GGAARRRAASSSRRRRRGK 102


>02_02_0498 -
           10973243-10973345,10973850-10973882,10974104-10974166,
           10975934-10976004,10976703-10976789,10976870-10976983,
           10977395-10977508,10977784-10977844,10978608-10978923,
           10979031-10979721,10979948-10980073,10980180-10980247,
           10980314-10980449,10981109-10981238,10981266-10981382,
           10981614-10981763,10982158-10982266,10982584-10982701,
           10984143-10984168,10984219-10984256,10986267-10986373
          Length = 925

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +1

Query: 688 VRLSPXSGSVALSHSSRCRYLSSGVGRSLQAGLCARTPRFSPTA 819
           V L P +  + +SH+  CR+      R+++A  C  + +FSPT+
Sbjct: 693 VTLEPEACRLTISHAVLCRFGKVLTSRAIRAAHCLTSIQFSPTS 736


>04_04_1107 -
           30954647-30954769,30955052-30955141,30955309-30955617,
           30955732-30955842,30955945-30956379,30956452-30956610,
           30957044-30957994,30959016-30959483
          Length = 881

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +1

Query: 592 KPDRTIKIPGVSPWXAPSVRSPVSDPAAYRIPVRLSPXSGSVAL 723
           +P R + IPG  P  A  + +PV  P     P R+ P  G  AL
Sbjct: 54  RPRRALPIPGRGPPPAAVLHAPVPVPVQVPAPARM-PCGGCCAL 96


>02_02_0691 + 12999452-12999820
          Length = 122

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 21/61 (34%), Positives = 29/61 (47%)
 Frame = +3

Query: 486 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLXSSLGALSCFR 665
           S+ P    +PR WR ++GS     I+   A  RGG  R + +  RR       GA+  FR
Sbjct: 12  SEAPVVAPKPRGWRMAVGSIGGGGISPPVA--RGGR-RGERERGRRSAGGGLTGAVDAFR 68

Query: 666 P 668
           P
Sbjct: 69  P 69


>11_04_0183 +
           14642037-14642069,14642099-14642220,14642791-14642974,
           14643148-14643348
          Length = 179

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +1

Query: 751 SSGVGRSLQAGLCARTPRFSPTAAPYPVTIVLIXPXVKTXYR 876
           S G  R+  AG     P  SPTA+P P+  +L+ P     YR
Sbjct: 80  SGGGPRATSAGSRLPDPATSPTASP-PIAYLLLHPIFGCLYR 120


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 299 NESAN---ARGEAVCVLGALPLPRSLTRCAR 382
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>05_04_0268 -
           19574540-19574582,19574664-19574755,19574843-19574920,
           19575095-19575232,19575478-19575606,19575889-19576018,
           19576171-19576348,19576715-19576853,19577031-19577120,
           19577260-19577421,19577556-19577720,19577909-19578046,
           19578657-19578836,19579129-19579257,19579442-19579677,
           19579795-19579957,19580030-19580070,19580162-19580489,
           19581416-19581553,19581670-19581873
          Length = 966

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
 Frame = +1

Query: 637 APSVRSPVSDPAAYRIPVRLSPXSGSVALSHSSRCRYLSSGVGRSLQAGLCART-----P 801
           AP    PV+     R P+R  P + S+ L   +  R ++S    +  A   AR      P
Sbjct: 143 APDRTGPVAGVEVVRTPLRPEPSTTSLLLPIPAMVRLITSAAAAAAAAATAARRRAPCGP 202

Query: 802 RFSPT 816
           R SP+
Sbjct: 203 RLSPS 207


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,931,302
Number of Sequences: 37544
Number of extensions: 496719
Number of successful extensions: 1492
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1491
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)