Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_C10
         (1048 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00052-1|AAK95880.2|  308|Caenorhabditis elegans Hypothetical pr...    43   3e-04
Z75533-3|CAA99822.1|  868|Caenorhabditis elegans Hypothetical pr...    35   0.084
Z81545-2|CAB04438.1|  212|Caenorhabditis elegans Hypothetical pr...    33   0.26 
AL031627-7|CAA20959.2|  200|Caenorhabditis elegans Hypothetical ...    32   0.59 
AL031627-2|CAA20953.1|  179|Caenorhabditis elegans Hypothetical ...    31   1.8  
Z92832-3|CAB07372.1|  333|Caenorhabditis elegans Hypothetical pr...    30   2.4  
AL031627-8|CAA20960.2|  222|Caenorhabditis elegans Hypothetical ...    30   3.2  
AF067216-8|AAN84852.1|  954|Caenorhabditis elegans Hypothetical ...    29   4.2  
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ...    29   4.2  
Z82052-4|CAB04827.2|  374|Caenorhabditis elegans Hypothetical pr...    29   5.5  
Z81542-2|CAB04416.1|  228|Caenorhabditis elegans Hypothetical pr...    28   9.6  
AF047655-9|AAC04395.1|  313|Caenorhabditis elegans Hypothetical ...    28   9.6  
AF040661-10|AAG24215.1|  426|Caenorhabditis elegans Hypothetical...    28   9.6  

>U00052-1|AAK95880.2|  308|Caenorhabditis elegans Hypothetical
           protein K02F3.5 protein.
          Length = 308

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 20/65 (30%), Positives = 34/65 (52%)
 Frame = +3

Query: 519 GIHATFSKGDYRSVEGVPLANIPHDWADYEPDNAGDNENCILMNPDGNFADVNCTETFQY 698
           G++    +  +R+ +G P+    + W   +PDN   NENC+ ++  G + D  C  T  +
Sbjct: 245 GVNDIQKENVFRNSDGTPVDF--YKWGKKQPDNQEHNENCVEVDHSGQWTDKLCIITRPF 302

Query: 699 VCYKK 713
           VC KK
Sbjct: 303 VCKKK 307


>Z75533-3|CAA99822.1|  868|Caenorhabditis elegans Hypothetical
           protein C54G4.4 protein.
          Length = 868

 Score = 35.1 bits (77), Expect = 0.084
 Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
 Frame = +3

Query: 399 VSSQLRCHLEGSVLASPLDDALKSGMLSLIKNKTSCGIFTGIHATFSKGDYRSVEGVPLA 578
           + +Q +C   GS L   +DD+ + G+ S +   +S   F  I A+ S  ++R V+G  + 
Sbjct: 371 LGAQRKCLDRGSTLPLRIDDSTRRGLRSALSASSSAKAFYWIGASSSMTEWRWVDGEGVG 430

Query: 579 NIPHDWADYEPDNAGDNENCILMNP-DGNFADVNCTETFQYVCYKK 713
           +   DW          +E  +L  P +  +   + T    ++C  K
Sbjct: 431 D-SADWPGQPSPVPSASEAVLLARPLEWKWVPASQTAWNSFLCQSK 475


>Z81545-2|CAB04438.1|  212|Caenorhabditis elegans Hypothetical
           protein F49H6.2 protein.
          Length = 212

 Score = 33.5 bits (73), Expect = 0.26
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
 Frame = +3

Query: 495 KTSCGIFTGIHATFSK-GDYRSVEGVPLANIPHDWADYEPDN-AGDNENCILMNPDGNFA 668
           +T+  + +G+ AT ++   +   +G         W   EP+N AG  E+C++ N     +
Sbjct: 136 RTAACMSSGLTATCTRLNSFSWTDGSATGTAGFVWNGIEPNNGAGMTESCVVENYMALLS 195

Query: 669 DVNCTETFQ-YVCYK 710
           D  CT  F  Y C K
Sbjct: 196 DQQCTRVFPGYACGK 210


>AL031627-7|CAA20959.2|  200|Caenorhabditis elegans Hypothetical
           protein Y102A5C.16 protein.
          Length = 200

 Score = 32.3 bits (70), Expect = 0.59
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = +3

Query: 606 EPDNAGDNENCILMNPDGNFADVNCT--ETFQYVCYKK 713
           EP+N   NE+C+LMN  G  +D  CT  +   +VC K+
Sbjct: 161 EPNNGSLNEHCLLMNWQGFMSDQFCTIPDYTGWVCGKR 198


>AL031627-2|CAA20953.1|  179|Caenorhabditis elegans Hypothetical
           protein Y102A5C.7 protein.
          Length = 179

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +3

Query: 606 EPDNAGDNENCILMNPDGNFADVNC--TETFQYVCYK 710
           EP+N G  E C+++   G  +D  C  T+   YVC K
Sbjct: 140 EPNNVGGTEQCLVLTWTGLMSDQTCARTDYVGYVCGK 176


>Z92832-3|CAB07372.1|  333|Caenorhabditis elegans Hypothetical
           protein F31D4.4 protein.
          Length = 333

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +1

Query: 820 WSRAYMACSAEGGYLTIINNDKEAAFLRDLFAK-NP 924
           +S A   C+     L IIN+++EA+ +R+ FA+ NP
Sbjct: 43  FSEALEYCTQSNASLVIINSEEEASIVREFFARENP 78


>AL031627-8|CAA20960.2|  222|Caenorhabditis elegans Hypothetical
           protein Y102A5C.17 protein.
          Length = 222

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +3

Query: 606 EPDNAGDNENCILMNPDGNFADVNC--TETFQYVCYK 710
           EP+N G  E C+++   G  +D  C  T+   YVC K
Sbjct: 183 EPNNVGGMEQCLVLTWTGLMSDQTCARTDYVGYVCGK 219


>AF067216-8|AAN84852.1|  954|Caenorhabditis elegans Hypothetical
           protein C35E7.5b protein.
          Length = 954

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 19/69 (27%), Positives = 31/69 (44%)
 Frame = +3

Query: 549 YRSVEGVPLANIPHDWADYEPDNAGDNENCILMNPDGNFADVNCTETFQYVCYKKKTSTV 728
           Y+  +G  L ++   W + E  N         +NPDGN +     E FQY  + +     
Sbjct: 176 YQDRKGKELISLQVTWLNKEQGNME-----YFVNPDGNISKYQWNEKFQYFDHVRTLDVE 230

Query: 729 AMASCGSVD 755
            +AS GS++
Sbjct: 231 TLAS-GSIN 238


>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
           protein C35E7.5a protein.
          Length = 1262

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 19/69 (27%), Positives = 31/69 (44%)
 Frame = +3

Query: 549 YRSVEGVPLANIPHDWADYEPDNAGDNENCILMNPDGNFADVNCTETFQYVCYKKKTSTV 728
           Y+  +G  L ++   W + E  N         +NPDGN +     E FQY  + +     
Sbjct: 176 YQDRKGKELISLQVTWLNKEQGNME-----YFVNPDGNISKYQWNEKFQYFDHVRTLDVE 230

Query: 729 AMASCGSVD 755
            +AS GS++
Sbjct: 231 TLAS-GSIN 238


>Z82052-4|CAB04827.2|  374|Caenorhabditis elegans Hypothetical
           protein T25E12.9 protein.
          Length = 374

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
 Frame = +3

Query: 420 HLEGSVLASPLDDALKSGMLSLIKNKTSCGIFTGIHATFSKGDYRSVEGVP--LANIPHD 593
           +L GS L S   D     ++  +K+K    ++TG+     K  +     V    A + ++
Sbjct: 144 NLGGSTLFSIRSDIENRALVDFVKDKRIENLWTGLICV-GKNSFSCTWDVNSGTAAVYNN 202

Query: 594 WADYEPDNA-GDNENCILMNPD-GNFADVNCTETFQYVC 704
           +A+  P+N  GD  + +      G +A  +C ET  +VC
Sbjct: 203 FAEGYPNNVYGDCIHYMTTGTQAGQWASGSCNETMSFVC 241


>Z81542-2|CAB04416.1|  228|Caenorhabditis elegans Hypothetical
           protein F49A5.3 protein.
          Length = 228

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = +3

Query: 588 HDWADYEPDNA-GDNENCILMNPD-GNFADVNCTETFQYVC 704
           H++A+  P+N  GD    +      GN+A+ +CTET  +VC
Sbjct: 59  HNFAEDHPNNEYGDCIYYMTTGTQAGNWANGSCTETMSFVC 99


>AF047655-9|AAC04395.1|  313|Caenorhabditis elegans Hypothetical
           protein C17B7.11 protein.
          Length = 313

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +3

Query: 567 VPLANIPHDWAD-YEPDNAGDNENCILMNPDGNFADVNC 680
           VP +N P D A  ++PD AG NE  I  + DGN   ++C
Sbjct: 262 VPQSN-PVDIAKVFKPDYAGGNEYSIEYSDDGNKFAIDC 299


>AF040661-10|AAG24215.1|  426|Caenorhabditis elegans Hypothetical
           protein W10G11.6 protein.
          Length = 426

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +1

Query: 829 AYMACSAEGGYLTIINNDKEAAFL-RDLFAKNPXRS 933
           A  AC+A+GG LT + N  +A F+ R L A  P  S
Sbjct: 113 AERACAAKGGTLTGLQNRDDALFIQRSLLALIPQNS 148


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,548,214
Number of Sequences: 27780
Number of extensions: 360936
Number of successful extensions: 927
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2782955308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)