Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_C08
         (841 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0005 + 11568545-11569119,11569179-11569191                       32   0.49 
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    31   1.1  
02_05_0686 - 30900748-30902167,30903442-30904742                       30   2.6  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    29   6.1  
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703...    29   6.1  

>01_03_0005 + 11568545-11569119,11569179-11569191
          Length = 195

 Score = 32.3 bits (70), Expect = 0.49
 Identities = 25/90 (27%), Positives = 27/90 (30%), Gaps = 8/90 (8%)
 Frame = +1

Query: 373 PPPXWGXXFGGGKXPPKXXKXXPXXXXXXXGGXXTXGG-----PPPXXXXXGXX---PXG 528
           PPP +    GGG          P       GG  + GG     PPP     G       G
Sbjct: 71  PPPSYPSGGGGGGGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPPTGGGGGGGGGWQQG 130

Query: 529 GXXXXXXXXPPPPXKKXXXXXXXXXXPPPP 618
           G        PPPP             PPPP
Sbjct: 131 GGGGGAYPTPPPPNPFLPYFPFYYYSPPPP 160


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 14/45 (31%), Positives = 15/45 (33%)
 Frame = +1

Query: 487 PPPXXXXXGXXPXGGXXXXXXXXPPPPXKKXXXXXXXXXXPPPPP 621
           PPP     G  P           PPPP  +          PPPPP
Sbjct: 548 PPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPP 592


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 22/73 (30%), Positives = 22/73 (30%), Gaps = 2/73 (2%)
 Frame = +3

Query: 414 PPKKXKXXPPXFXXXXGGXKXXX--GPPPXXXXXGXXXPXGXXXXXXXXXPPPXXKKXXX 587
           PPK     PP               GPPP     G   P           PPP  KK   
Sbjct: 318 PPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKK--- 374

Query: 588 XXXXXXXPPPPPK 626
                  PPPPPK
Sbjct: 375 ----GGPPPPPPK 383



 Score = 29.5 bits (63), Expect = 3.5
 Identities = 17/48 (35%), Positives = 17/48 (35%)
 Frame = +1

Query: 484 GPPPXXXXXGXXPXGGXXXXXXXXPPPPXKKXXXXXXXXXXPPPPPXK 627
           GPPP     G  P           PPPP  K          PPPPP K
Sbjct: 343 GPPPPPPAKGPPPPPPPKGPSPPPPPPPGGK-------KGGPPPPPPK 383



 Score = 28.3 bits (60), Expect = 8.1
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +1

Query: 556 PPPPXKKXXXXXXXXXXPPPPPXK 627
           PPPP K           PPPPP K
Sbjct: 328 PPPPPKAAPPPPPPKGPPPPPPAK 351


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 17/70 (24%), Positives = 18/70 (25%)
 Frame = +3

Query: 414 PPKKXKXXPPXFXXXXGGXKXXXGPPPXXXXXGXXXPXGXXXXXXXXXPPPXXKKXXXXX 593
           PP       P F    G  +    PPP         P           PPP         
Sbjct: 59  PPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPP 118

Query: 594 XXXXXPPPPP 623
                PPPPP
Sbjct: 119 SAPPPPPPPP 128


>01_01_0892 +
           7037384-7037795,7038447-7038962,7039507-7039593,
           7039698-7039768,7040148-7040224,7040380-7040527,
           7040973-7041134,7041374-7041694
          Length = 597

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 14/45 (31%), Positives = 14/45 (31%)
 Frame = +1

Query: 487 PPPXXXXXGXXPXGGXXXXXXXXPPPPXKKXXXXXXXXXXPPPPP 621
           PPP     G    G         PPPP             PPPPP
Sbjct: 130 PPPPPPFKGDHYGGVYQNWQQNGPPPPPDHVLKKVPSHPSPPPPP 174


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,621,159
Number of Sequences: 37544
Number of extensions: 438710
Number of successful extensions: 1350
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)