Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_C06
         (888 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457114-1|CAG33395.1|  364|Homo sapiens HAVCR1 protein.               33   1.0  
BC013325-1|AAH13325.1|  364|Homo sapiens HAVCR1 protein protein.       33   1.0  
M22405-1|AAA36334.1|  278|Homo sapiens protein ( Human intestina...    32   2.4  
M57417-1|AAA63229.2|  294|Homo sapiens mucin protein.                  31   4.2  
AF043724-1|AAC39862.1|  359|Homo sapiens hepatitis A virus cellu...    31   4.2  
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.                  31   7.4  

>CR457114-1|CAG33395.1|  364|Homo sapiens HAVCR1 protein.
          Length = 364

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 22/65 (33%), Positives = 35/65 (53%)
 Frame = +2

Query: 239 TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPL 418
           TVPTT      T     TT  T++ +P TTT++ T T +STT  +  T      T+S+P+
Sbjct: 149 TVPTTTTVPMTTVPT--TTVPTTMSIPTTTTVLTTMT-VSTTTSVP-TTTSIPTTTSVPV 204

Query: 419 SLVLA 433
           +  ++
Sbjct: 205 TTTVS 209


>BC013325-1|AAH13325.1|  364|Homo sapiens HAVCR1 protein protein.
          Length = 364

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 22/65 (33%), Positives = 35/65 (53%)
 Frame = +2

Query: 239 TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPL 418
           TVPTT      T     TT  T++ +P TTT++ T T +STT  +  T      T+S+P+
Sbjct: 149 TVPTTTTVPMTTVPT--TTVPTTMSIPTTTTVLTTMT-VSTTTSVP-TTTSIPTTTSVPV 204

Query: 419 SLVLA 433
           +  ++
Sbjct: 205 TTTVS 209


>M22405-1|AAA36334.1|  278|Homo sapiens protein ( Human intestinal
           mucin mRNA, partial cds, clone SMUC 41. ).
          Length = 278

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
 Frame = +2

Query: 233 T*TVPTTDPRGQETATN-LLTTARTSLILP-KTTTLMETATNLSTTVHITWT-VPKADLT 403
           T   PT  P G +T T  L+TT  T    P  T+T   T T ++TT  +T T  P    T
Sbjct: 39  TTVTPTPTPTGTQTPTTVLITTTTTMTPTPTPTSTKSTTVTPITTTTTVTATPTPTGTQT 98

Query: 404 -SSLPLSLVLAV 436
            + +P+S    V
Sbjct: 99  PTMIPISTTTTV 110


>M57417-1|AAA63229.2|  294|Homo sapiens mucin protein.
          Length = 294

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +2

Query: 245 PTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 409
           PT  P G +T T    T  T+++ P T T+  T T   T +  T   P    TS+
Sbjct: 2   PTPTPTGTQTPTPTPITTTTTMVTP-TPTITSTQTPTPTPITTTTVTPTPTPTST 55



 Score = 31.5 bits (68), Expect = 4.2
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +2

Query: 245 PTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 409
           PT  P G +T T    T  T+++ P T T+  T T   T +  T   P    TS+
Sbjct: 222 PTPTPTGTQTPTPTPITTTTTMVTP-TPTITSTQTPTPTPITTTTVTPTPTPTST 275


>AF043724-1|AAC39862.1|  359|Homo sapiens hepatitis A virus cellular
           receptor 1 protein.
          Length = 359

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +2

Query: 272 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP---KADLTSSLP 415
           T    +TT RTS  +P TTT+  T    + ++  T TVP       T+S+P
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPTTTVPTTMSIPTTTTVPTTMTVSTTTSVP 186


>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
          Length = 5179

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 21/71 (29%), Positives = 30/71 (42%)
 Frame = +2

Query: 170  LAFLGP*SVNPDTCQ*VLDQRT*TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETAT 349
            +AF     +N   C+ V    T T  TT+     T T + TT   +     T T   T T
Sbjct: 1863 MAFCLNYEINVQCCECVTQPTTMTTTTTENPTPPTTTPITTTTTVTPTPTPTGTQTPTTT 1922

Query: 350  NLSTTVHITWT 382
             ++TT  +T T
Sbjct: 1923 PITTTTTVTPT 1933



 Score = 30.3 bits (65), Expect = 9.8
 Identities = 22/61 (36%), Positives = 27/61 (44%)
 Frame = +2

Query: 233  T*TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSL 412
            T   PT  P G +T T    T  T++    T T   T T      H T T P A+LT+S 
Sbjct: 4159 TTVTPTPTPTGTQTPTTTPITTTTTV----TPTPTPTGTQTGPPTH-TSTAPIAELTTSN 4213

Query: 413  P 415
            P
Sbjct: 4214 P 4214


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,976,243
Number of Sequences: 237096
Number of extensions: 2275276
Number of successful extensions: 12252
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12242
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)