Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_C01
         (980 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   4.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   4.6  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    24   8.0  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 4.6
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +3

Query: 843 PXPXPPXPXXPPP 881
           P P PP P  PPP
Sbjct: 583 PAPPPPPPMGPPP 595


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 4.6
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = -2

Query: 880 GGGXXGXGGXGXGXPXXXPGXGXKAR 803
           GGG  G GG   G P    G G   R
Sbjct: 208 GGGAPGGGGGSSGGPGPGGGGGGGGR 233


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 23.8 bits (49), Expect = 8.0
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +1

Query: 823  REXPGAGXPPXPPP 864
            RE   AG PP PPP
Sbjct: 1060 RELQRAGRPPSPPP 1073


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.306    0.138    0.434 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 400,475
Number of Sequences: 2352
Number of extensions: 4570
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 107296839
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)