Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_B23
(970 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate |Schizos... 28 1.7
SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual 28 1.7
SPAC1296.01c ||SPAC22F3.01|phosphoacetylglucosamine mutase |Schi... 28 2.3
SPBC3E7.15c |mug83|SPBC4F6.02c|sphingosine N-acyltransferase Lac... 27 4.0
SPBC106.17c |cys2||O-acetyltransferase |Schizosaccharomyces pomb... 27 4.0
SPAC1071.05 |||S-adenosylmethionine-dependent methyltransferase ... 27 5.3
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 26 6.9
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 26 6.9
SPBC4C3.07 |||translation initiation factor eIF3f|Schizosaccharo... 26 9.2
>SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 640
Score = 28.3 bits (60), Expect = 1.7
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 1/126 (0%)
Frame = -3
Query: 416 PTQGRTPCSTELIQPFS*-ALLSQYFLKTSSSAPFGLASSISVFRTFKSTSPLRQFPKVR 240
P TP + + +P S AL S + S A I FKS +P +
Sbjct: 317 PVDTHTPSTPIMSRPPSMKALSSGVESQDESVASSNFQVPIISNPLFKSPAPYSPTSVIS 376
Query: 239 NAASTXRDFVFSIVLGALRGHNRCNLTKVISQHTGSENRYQDSLPHHCNQGNLFDFERLD 60
N +ST + V S G V+ ++ G +QD + +G +F E++
Sbjct: 377 NHSSTGKSLVISEWAYLASGS-----ANVVFEYVGKNPYFQDKVIRLRRRGQVFTTEQVY 431
Query: 59 THWQNL 42
++QN+
Sbjct: 432 EYYQNV 437
>SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 706
Score = 28.3 bits (60), Expect = 1.7
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = -3
Query: 338 KTSSSAPFGLASSISVFRTFKSTSPLRQFPKVRNAASTXRDFVFSIVLGALRGHN---RC 168
KT S+ PF S++ T +T P++ VR + +I G G +
Sbjct: 561 KTGSNNPFAQFSNLPSQSTAPATKPMKP---VRTGDDRFSNIAQAISTGNPMGTDSFGNI 617
Query: 167 NLTKVISQHTGSE 129
LT+V +QHTGS+
Sbjct: 618 GLTRVPTQHTGSK 630
>SPAC1296.01c ||SPAC22F3.01|phosphoacetylglucosamine mutase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 542
Score = 27.9 bits (59), Expect = 2.3
Identities = 17/69 (24%), Positives = 37/69 (53%)
Frame = +1
Query: 265 GLVDLNVLKTEIEEAKPNGALDEVFKKYCDKSAQLKGCISSVLQGVRPCVGNEYANHIND 444
GL +N+L + ++ +K LD+V D + +L C++S+L+ + G+E +
Sbjct: 85 GLKIVNILSS-LDSSKWEAYLDQVVN--ADSADELTVCLTSILKKAKIIPGSEARVFVGY 141
Query: 445 AQNSTNQLI 471
ST++++
Sbjct: 142 DSRSTSEIL 150
>SPBC3E7.15c |mug83|SPBC4F6.02c|sphingosine N-acyltransferase
Lac1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 384
Score = 27.1 bits (57), Expect = 4.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -3
Query: 713 CLRVSVWNTLSRDFTIQEVISSTFAHFSTR 624
CL +++ T R+F +QE+I+ HF+ R
Sbjct: 109 CLFYALFFTFCREFIMQEIIARIGRHFNIR 138
>SPBC106.17c |cys2||O-acetyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 504
Score = 27.1 bits (57), Expect = 4.0
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -3
Query: 311 LASSISVFRTFKSTSPLRQFPKVRNAASTXRDFVFSI 201
L S VFR F+S++P FP V A R F S+
Sbjct: 9 LQLSWQVFRRFQSSNPQLSFPCVDQAQERSRQFEQSL 45
>SPAC1071.05 |||S-adenosylmethionine-dependent methyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 26.6 bits (56), Expect = 5.3
Identities = 13/55 (23%), Positives = 25/55 (45%)
Frame = -3
Query: 656 ISSTFAHFSTRLKLLADSTVGKLCFKFKKHVLRFSVFCWKHSGPPSAMNKAIRSP 492
+ + F++RL+ L D K + S+ W+ PPS ++ + +SP
Sbjct: 280 VGGSILEFNSRLQKLVDDPNSLKAIKTSTQNVGRSIVYWEKEFPPSNIDSSPQSP 334
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 26.2 bits (55), Expect = 6.9
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -1
Query: 631 QQGSSYWRIPQWGSSVSNLKSMS*DSQSFAGSTQGRLP 518
Q+ SS R+ + S++S+LKS SQ+ GST +P
Sbjct: 376 QRLSSLNRVASFESNISSLKSALYASQNSDGSTSNPVP 413
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 26.2 bits (55), Expect = 6.9
Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +1
Query: 166 LQRL*PRNAPRTMLKTKSLXVEAALRTFGNCLKGLVDLNVLKTEIEEAKP-NGALDEVFK 342
L+ L +N+ + + +T E +K DLN + EE + +D + K
Sbjct: 482 LRLLASKNSDKALAETNIRLQEVTKELETLRMKNSNDLNEIHDLREENEGLTLKIDSITK 541
Query: 343 KYCDKSAQLKGCISSVLQGVRPCVG--NEYANHINDAQNSTNQLIDFVCYKDGD 498
+ +L+ I S V G +EY N + D + + N++++ YKD D
Sbjct: 542 EKDRLINELEQRIKSYEVNVSELNGTIDEYRNKLKDKEETYNEVMNAFQYKDND 595
>SPBC4C3.07 |||translation initiation factor
eIF3f|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 25.8 bits (54), Expect = 9.2
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = -1
Query: 700 RCGTLFRGISRYRRSSHQLLRIFQQGSSYWRIPQWGSSVSNL 575
R +LF + + RRS+ +LL + ++ S Y + GSS +N+
Sbjct: 205 RLASLFTDLQQLRRSTLELLSMIERVSDYVQNVIDGSSPANV 246
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,510,357
Number of Sequences: 5004
Number of extensions: 69834
Number of successful extensions: 214
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 213
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 497299314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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