Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_B23
         (970 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr...    29   5.0  
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr...    29   5.0  
U56964-6|AAB54035.1|  848|Caenorhabditis elegans Hypothetical pr...    29   5.0  
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.      29   5.0  
Z92817-4|CAB07297.3|  633|Caenorhabditis elegans Hypothetical pr...    29   6.6  
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p...    29   6.6  
L23647-8|AAK29993.1|   54|Caenorhabditis elegans Hypothetical pr...    29   6.6  
L07144-2|AAK21439.1|   54|Caenorhabditis elegans Hypothetical pr...    29   6.6  
AC024801-4|AAF59648.4|  485|Caenorhabditis elegans Hypothetical ...    28   8.7  

>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +1

Query: 433 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 528
           ++ DA N T +LID    K+GD +A+ +A  G
Sbjct: 66  NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97


>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +1

Query: 433 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 528
           ++ DA N T +LID    K+GD +A+ +A  G
Sbjct: 66  NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97


>U56964-6|AAB54035.1|  848|Caenorhabditis elegans Hypothetical
           protein F52E4.7 protein.
          Length = 848

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
 Frame = +1

Query: 430 NHINDAQNSTNQLIDFVCYKDGDRIALFIAEGGPECFQQKTENLKTCFLNLKQSFPTVES 609
           N + D++NS NQL+           ++  A  G E  +++ +        ++ S   +E 
Sbjct: 207 NSMMDSENSVNQLLS----------SIDAALTGVESVEKELDRCDDILAFVRNSIELIEE 256

Query: 610 ANNLSLVEKCAK--VDEMTSCIVKSLERV--FHTDTRKHGGITDQVHAQR 747
            ++LS+VE+  K  ++E     V SL+ V   H +T K    ++    QR
Sbjct: 257 KDSLSVVERKNKQRLNEEIVSFVNSLQAVTDSHIETLKQANFSNPESVQR 306


>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
          Length = 1383

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +1

Query: 433 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 528
           ++ DA N T +LID    K+GD +A+ +A  G
Sbjct: 66  NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97


>Z92817-4|CAB07297.3|  633|Caenorhabditis elegans Hypothetical
           protein W08G11.4 protein.
          Length = 633

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 674 NPSKECSTPTPANMAESLIKFMRKDSPCHTALP 772
           NP  E    TP+   E L  +++KD P  T LP
Sbjct: 481 NPPAEGKEVTPSLFPEKLTDYLKKDGPNMTPLP 513


>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
           protein C39D10.7 protein.
          Length = 1185

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 18/66 (27%), Positives = 32/66 (48%)
 Frame = +1

Query: 604 ESANNLSLVEKCAKVDEMTSCIVKSLERVFHTDTRKHGGITDQVHAQRLSLPHRSAQNRL 783
           + AN +S + KC    ++   I+K  +  +HT+    GG+ DQ  A   S P   + N +
Sbjct: 133 QCANGISYMRKCP-YQQVYVPILKRCD--YHTNCNASGGVKDQAAAAYAS-PTYDSDNYI 188

Query: 784 IAPSDF 801
           +   +F
Sbjct: 189 VTTKEF 194


>L23647-8|AAK29993.1|   54|Caenorhabditis elegans Hypothetical
           protein ZC262.5 protein.
          Length = 54

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = +3

Query: 132 AAGVLADDFSQITAVVTSQCTKNNAEDKVP 221
           AAG+    +SQI A V  QCTK  A  K P
Sbjct: 6   AAGLNYVRYSQIAAQVVRQCTKGGANVKKP 35


>L07144-2|AAK21439.1|   54|Caenorhabditis elegans Hypothetical
           protein R05D3.6 protein.
          Length = 54

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = +3

Query: 132 AAGVLADDFSQITAVVTSQCTKNNAEDKVP 221
           AAG+    +SQI A V  QCTK  A  K P
Sbjct: 6   AAGLNYVRYSQIAAQVVRQCTKGGANVKKP 35


>AC024801-4|AAF59648.4|  485|Caenorhabditis elegans Hypothetical
           protein Y50D7A.3a protein.
          Length = 485

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -1

Query: 691 TLFRGISR-YRRSSHQLLRIFQQGSSYWRIPQWGSSVSNLKSM 566
           TL  G +  Y R    +LR+ QQG   +R  QW +  +  K++
Sbjct: 232 TLLAGCAPFYHRKQLMMLRLIQQGKFEFRNEQWANITAEAKNL 274


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,792,636
Number of Sequences: 27780
Number of extensions: 415059
Number of successful extensions: 1224
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1224
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2510937120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)