Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_B20
(958 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 39 0.001
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.026
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.18
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.42
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.55
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.55
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.73
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 29 0.97
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 1.3
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 3.9
SPBC16G5.05c |||MSP domain|Schizosaccharomyces pombe|chr 2|||Manual 26 9.0
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 38.7 bits (86), Expect = 0.001
Identities = 22/86 (25%), Positives = 22/86 (25%)
Frame = +2
Query: 641 GXXGXXXPPRGRGXXKXXPXXPXPPXXPXXGPXXXXXXXXPPXPPXXXTXXPXPPXPRXX 820
G PP G P P PP P P P P P PP
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIA 456
Query: 821 XQNPXXXXXXXPPPPPXXXPXPXXXP 898
P P PP P P P
Sbjct: 457 PPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 31.9 bits (69), Expect = 0.14
Identities = 19/85 (22%), Positives = 20/85 (23%)
Frame = +1
Query: 667 PGEGXXQAXXXXPXTTQXPXXXPXXXXXXPXPPXPPRXXDKXXXXPPXPAXXPKPPXXXP 846
P G P P P PP PP P PP P
Sbjct: 370 PSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPP 429
Query: 847 XXXPPPPPTXXPPXXXXPXXPXXRP 921
P PP+ P P P
Sbjct: 430 SLPPSAPPSLPMGAPAAPPLPPSAP 454
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Frame = +1
Query: 802 PPXPAXXP--KPPXXXPXXXPPPPPTXXPPXXXXPXXPXXRP 921
PP P P +PP P P PP PP P P
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSP 271
Score = 28.7 bits (61), Expect = 1.3
Identities = 19/81 (23%), Positives = 20/81 (24%)
Frame = +3
Query: 663 PPGGGXXXSXXPXXXXHPXXPXXAXXXXXXPXXPXXPPXXXQXXPXPPXPGXXXKTPXXX 842
PP G + P P P A P P P PP P
Sbjct: 404 PPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGM 463
Query: 843 XXXXPPPPPXXXPXRXXXPXP 905
P PP P P P
Sbjct: 464 PAAPPLPPAAPAPPPAPAPAP 484
Score = 28.3 bits (60), Expect = 1.7
Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 3/55 (5%)
Frame = +1
Query: 754 PXPPXPPRXXDK-XXXXPP--XPAXXPKPPXXXPXXXPPPPPTXXPPXXXXPXXP 909
P PP PPR PP A P PP P PPP P P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAP 391
Score = 26.2 bits (55), Expect = 6.8
Identities = 15/54 (27%), Positives = 15/54 (27%), Gaps = 1/54 (1%)
Frame = +3
Query: 774 PXXXQXXPXPPXPGXXXKTPXXXXXXXPPPPPXXXPXRXXXPXPPXXPP-PXXP 932
P P PP P PPP P PP PP P P
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAP 277
Score = 26.2 bits (55), Expect = 6.8
Identities = 18/59 (30%), Positives = 18/59 (30%), Gaps = 13/59 (22%)
Frame = +3
Query: 795 PXPPXP----GXXXKTPXXXXXXXPPPPPXXXPXRXXXPXP---------PXXPPPXXP 932
P PP P P PPPPP P P P P PPP P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Score = 25.8 bits (54), Expect = 9.0
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 760 PPXPPRXXDKXXXXPPXPAXXPKPPXXXPXXXPPPPPTXXPP 885
PP PP PA P PP P P P P P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPP-AAPAPPPAPAPAPAAP 487
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.3 bits (75), Expect = 0.026
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +3
Query: 771 PPXXXQXXPXPPXPGXXXKTPXXXXXXXPPPPPXXXPXRXXXPXPPXXPPP 923
PP P P P PPPPP P PP PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.9 bits (69), Expect = 0.14
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +1
Query: 760 PPXPPRXXDKXXXXPPXPAXXPKPPXXXPXXXPPPPPTXXPPXXXXPXXPXXRP 921
PP PP P PA P PP PPPPP P P P
Sbjct: 732 PPPPP---PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.9 bits (59), Expect = 2.2
Identities = 18/56 (32%), Positives = 18/56 (32%), Gaps = 2/56 (3%)
Frame = +3
Query: 762 PXXPPXXXQXXPXPPXPGXXXKTPXXXXXXXPPPPPXXXP--XRXXXPXPPXXPPP 923
P P P PP PG P PPPPP R P P P P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPP----PPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/47 (29%), Positives = 14/47 (29%), Gaps = 1/47 (2%)
Frame = +2
Query: 794 PXPPXPRXXXQNPXXXXXXXPPPPPX-XXPXPXXXPXXXXXXAPXXP 931
P PP P P PPP P P P P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 26.2 bits (55), Expect = 6.8
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = +2
Query: 704 PXPPXXPXXGPXXXXXXXXPPXPPXXXTXXPXPPXPRXXXQNPXXXXXXXPPPPPXXXP 880
P PP P PP P P PP P P PPPPP P
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAP---IMGGPPPPPP------PPGVAGAGPPPPPPPPP 783
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.5 bits (68), Expect = 0.18
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +1
Query: 754 PXPPXPPRXXDKXXXXPPXPAXXPKPPXXXPXXXPPPPPTXXPPXXXXP 900
P PP PP PP PA P P PPP P P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAP-------PPPLPASSAPSVPNP 1746
Score = 28.3 bits (60), Expect = 1.7
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 855 PPPPPXXXPXRXXXPXPPXXPPPXXP 932
PPPPP P P P PP P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 27.1 bits (57), Expect = 3.9
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +1
Query: 760 PPXPPRXXDKXXXXPPXPAXXPKPPXXXPXXXPPPPPTXXPPXXXXPXXP 909
PP P+ P P P PP P PP PP P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTP---PPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.1 bits (57), Expect = 3.9
Identities = 15/47 (31%), Positives = 15/47 (31%), Gaps = 3/47 (6%)
Frame = +3
Query: 801 PPXPGXXXKTPXXXXXXXPPPPPXXXPXRXXXP---XPPXXPPPXXP 932
PP P PPPP P P PP PPP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 30.3 bits (65), Expect = 0.42
Identities = 25/84 (29%), Positives = 25/84 (29%)
Frame = -3
Query: 881 GXXVGGGGGXXXGXXXGGFGXXAGXGGXXXXLSXXRGGXGGXGXXXXXXGXXXGXWVVXG 702
G GG GG G GGFG G GG G GG G G G G
Sbjct: 191 GGFGGGSGGPPPGP--GGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFG 248
Query: 701 XXXXAXXXPSPGGXXXXPXXRXXP 630
PGG P P
Sbjct: 249 GGLGGFGG-GPGGFGGGPGGHGGP 271
Score = 29.5 bits (63), Expect = 0.73
Identities = 20/52 (38%), Positives = 20/52 (38%)
Frame = -3
Query: 908 GXXGXXXXGGXXVGGGGGXXXGXXXGGFGXXAGXGGXXXXLSXXRGGXGGXG 753
G G G GGG G G GGFG GG L GG GG G
Sbjct: 214 GGEGHHHGGHGGFGGGPGGFEGGP-GGFGGG--PGGFGGGLGGFGGGPGGFG 262
Score = 27.5 bits (58), Expect = 3.0
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -3
Query: 884 GGXXVGGGGGXXXGXXXGGFGXXAGXGGXXXXLSXXRGGXGG 759
GG G GG GGFG G G GG GG
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGG 232
Score = 25.8 bits (54), Expect = 9.0
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = -3
Query: 920 GRXXGXXGXXXXGGXXVGGGGGXXXGXXXGGFGXXAGXGGXXXXLSXXRGGXGGXG 753
G G G G GGG G G GGFG G G GG GG G
Sbjct: 224 GGFGGGPGGFEGGPGGFGGGPGGFGGGL-GGFGGGPGGFGGGP------GGHGGPG 272
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.9 bits (64), Expect = 0.55
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 802 PPXPAXXPKPPXXXPXXXPPPPP 870
P P P PP P PPPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPP 28
Score = 26.6 bits (56), Expect = 5.2
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 858 PPPPXXXPXRXXXPXPPXXPPP 923
PPPP P PP PPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 6.8
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +1
Query: 811 PAXXPKPPXXXPXXXPPPPPTXXPP 885
P P PP P PP P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 855 PPPPPXXXPXRXXXPXPP 908
PPPPP P P PP
Sbjct: 12 PPPPPGFEPPSQPPPPPP 29
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.9 bits (64), Expect = 0.55
Identities = 17/70 (24%), Positives = 18/70 (25%)
Frame = +1
Query: 676 GXXQAXXXXPXTTQXPXXXPXXXXXXPXPPXPPRXXDKXXXXPPXPAXXPKPPXXXPXXX 855
G A P P PP P PP P+ P P P
Sbjct: 116 GKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPA 175
Query: 856 PPPPPTXXPP 885
P P PP
Sbjct: 176 QPAAPVKSPP 185
Score = 27.5 bits (58), Expect = 3.0
Identities = 16/50 (32%), Positives = 17/50 (34%), Gaps = 4/50 (8%)
Frame = +3
Query: 795 PXPPXPGXXXKTP--XXXXXXXPPPPPXXXP--XRXXXPXPPXXPPPXXP 932
P PP P + P PPP P P P P PPP P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Score = 26.2 bits (55), Expect = 6.8
Identities = 17/73 (23%), Positives = 19/73 (26%)
Frame = +1
Query: 664 PPGEGXXQAXXXXPXTTQXPXXXPXXXXXXPXPPXPPRXXDKXXXXPPXPAXXPKPPXXX 843
PP + P P P P PP PP P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPI-PSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPM 197
Query: 844 PXXXPPPPPTXXP 882
P PPPP + P
Sbjct: 198 PPKVPPPPLSQAP 210
Score = 26.2 bits (55), Expect = 6.8
Identities = 17/66 (25%), Positives = 19/66 (28%), Gaps = 5/66 (7%)
Frame = +1
Query: 703 PXTTQXPXXXPXXXXXXPXPPXPPRXXDKXXXXPPX-----PAXXPKPPXXXPXXXPPPP 867
P T+ P PP P + PP P P P PP P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
Query: 868 PTXXPP 885
P PP
Sbjct: 199 PKVPPP 204
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.5 bits (63), Expect = 0.73
Identities = 18/79 (22%), Positives = 19/79 (24%)
Frame = +3
Query: 696 PXXXXHPXXPXXAXXXXXXPXXPXXPPXXXQXXPXPPXPGXXXKTPXXXXXXXPPPPPXX 875
P P P + P PP PP P P PP P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Query: 876 XPXRXXXPXPPXXPPPXXP 932
P P PP P
Sbjct: 1175 SSGIPPVPKPAAGVPPVPP 1193
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +1
Query: 805 PXPAXXPKPPXXXPXXXPPPPPTXXPPXXXXPXXPXXRP 921
P PA P P P PT PP P P +P
Sbjct: 961 PRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKP 999
Score = 27.5 bits (58), Expect = 3.0
Identities = 15/48 (31%), Positives = 16/48 (33%), Gaps = 1/48 (2%)
Frame = +1
Query: 760 PPXPPRXXDKXXXXPPXPAXXPKPPXXXPXXXPP-PPPTXXPPXXXXP 900
P PP P PA PP P PP P P+ P P
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKP 1107
Score = 27.1 bits (57), Expect = 3.9
Identities = 15/60 (25%), Positives = 15/60 (25%)
Frame = +3
Query: 753 PXXPXXPPXXXQXXPXPPXPGXXXKTPXXXXXXXPPPPPXXXPXRXXXPXPPXXPPPXXP 932
P PP PP P P PP P P P PP P
Sbjct: 1086 PAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
Score = 27.1 bits (57), Expect = 3.9
Identities = 20/84 (23%), Positives = 22/84 (26%), Gaps = 5/84 (5%)
Frame = +3
Query: 696 PXXXXHPXXPXXAXXXXXXPXXPXXPPXXXQXXPXPPXPGX---XXKTPXXXXXXXPPPP 866
P P P + P PP PP P P P PP
Sbjct: 1134 PVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Query: 867 PXXXP--XRXXXPXPPXXPPPXXP 932
P P + PP PP P
Sbjct: 1194 PSEAPPVPKPSVGVPPVPPPSTAP 1217
Score = 27.1 bits (57), Expect = 3.9
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = +1
Query: 760 PPXPPRXXDKXXXXPPXPAXX-PKPPXXXPXXXPPPPPTXXPP 885
PP P PP A PKP P P PPP+ PP
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVP---PVPPPSTAPP 1218
Score = 25.8 bits (54), Expect = 9.0
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +1
Query: 760 PPXPPRXXDKXXXXPPXPAXXPKPPXXXPXXXPPPPPTXXPPXXXXPXXP 909
PP P D PP P PP P PP P + P P
Sbjct: 1022 PPVPLPSADA----PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVP 1067
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.1 bits (62), Expect = 0.97
Identities = 20/73 (27%), Positives = 22/73 (30%)
Frame = -3
Query: 920 GRXXGXXGXXXXGGXXVGGGGGXXXGXXXGGFGXXAGXGGXXXXLSXXRGGXGGXGXXXX 741
G G G G GG G G GG G G G S RGG G
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGAKVII 75
Query: 740 XXGXXXGXWVVXG 702
G ++ G
Sbjct: 76 EPHRHAGVFIARG 88
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 811 PAXXPKPPXXXPXXXPPPPPTXXP 882
P PK P PPPPPT P
Sbjct: 225 PTYTPKQADPLPAPPPPPPPTLPP 248
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.1 bits (57), Expect = 3.9
Identities = 16/56 (28%), Positives = 17/56 (30%), Gaps = 7/56 (12%)
Frame = +1
Query: 763 PXPPRXXDKXXXXPPXPAXX-------PKPPXXXPXXXPPPPPTXXPPXXXXPXXP 909
P PP + PP P P P P PPPP P P P
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 27.1 bits (57), Expect = 3.9
Identities = 16/56 (28%), Positives = 17/56 (30%), Gaps = 7/56 (12%)
Frame = +1
Query: 763 PXPPRXXDKXXXXPPXPAXX-------PKPPXXXPXXXPPPPPTXXPPXXXXPXXP 909
P PP + PP P P P P PPPP P P P
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 27.1 bits (57), Expect = 3.9
Identities = 16/56 (28%), Positives = 17/56 (30%), Gaps = 7/56 (12%)
Frame = +1
Query: 763 PXPPRXXDKXXXXPPXPAXX-------PKPPXXXPXXXPPPPPTXXPPXXXXPXXP 909
P PP + PP P P P P PPPP P P P
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 27.1 bits (57), Expect = 3.9
Identities = 16/56 (28%), Positives = 17/56 (30%), Gaps = 7/56 (12%)
Frame = +1
Query: 763 PXPPRXXDKXXXXPPXPAXX-------PKPPXXXPXXXPPPPPTXXPPXXXXPXXP 909
P PP + PP P P P P PPPP P P P
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 27.1 bits (57), Expect = 3.9
Identities = 16/56 (28%), Positives = 17/56 (30%), Gaps = 7/56 (12%)
Frame = +1
Query: 763 PXPPRXXDKXXXXPPXPAXX-------PKPPXXXPXXXPPPPPTXXPPXXXXPXXP 909
P PP + PP P P P P PPPP P P P
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 27.1 bits (57), Expect = 3.9
Identities = 16/56 (28%), Positives = 17/56 (30%), Gaps = 7/56 (12%)
Frame = +1
Query: 763 PXPPRXXDKXXXXPPXPAXX-------PKPPXXXPXXXPPPPPTXXPPXXXXPXXP 909
P PP + PP P P P P PPPP P P P
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
Score = 25.8 bits (54), Expect = 9.0
Identities = 16/56 (28%), Positives = 16/56 (28%), Gaps = 7/56 (12%)
Frame = +1
Query: 763 PXPPRXXDKXXXXPPXPAXX-------PKPPXXXPXXXPPPPPTXXPPXXXXPXXP 909
P PP PP P P P P PPPP P P P
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
>SPBC16G5.05c |||MSP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 25.8 bits (54), Expect = 9.0
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +3
Query: 861 PPPXXXPXRXXXPXPPXXPPPXXP 932
P P P R PP PPP P
Sbjct: 256 PKPSESPRRSVSSTPPVHPPPPVP 279
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,628,790
Number of Sequences: 5004
Number of extensions: 20600
Number of successful extensions: 280
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 156
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 489310570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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