Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_B16
(971 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 46 5e-05
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 46 5e-05
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 46 5e-05
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 42 9e-04
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 42 9e-04
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 42 9e-04
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 38 0.014
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 37 0.019
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 37 0.025
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 37 0.025
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 37 0.025
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.033
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.033
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 36 0.044
Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical pr... 34 0.13
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 34 0.13
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 34 0.18
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 33 0.23
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 33 0.23
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 33 0.23
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 33 0.23
AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen prot... 33 0.23
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 33 0.41
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 33 0.41
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 32 0.54
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 32 0.54
Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical pr... 32 0.71
Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical pr... 32 0.71
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical pr... 31 0.94
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 31 0.94
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 31 0.94
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 31 1.2
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 1.2
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 1.2
U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protei... 31 1.2
L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen... 31 1.2
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 31 1.2
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 31 1.2
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 30 2.2
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 30 2.2
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 30 2.2
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 30 2.2
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 30 2.2
Z73425-5|CAA97787.1| 427|Caenorhabditis elegans Hypothetical pr... 30 2.9
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 30 2.9
U00066-9|AAA50743.3| 780|Caenorhabditis elegans Mediator protei... 30 2.9
U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protei... 30 2.9
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 30 2.9
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 2.9
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 3.8
U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protei... 29 3.8
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 29 3.8
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 29 3.8
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 29 5.0
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical pr... 29 5.0
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 5.0
U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily ass... 29 6.6
DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein. 29 6.6
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 6.6
AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen prot... 29 6.6
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 6.6
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 28 8.7
Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 8.7
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 28 8.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 8.7
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 28 8.7
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 28 8.7
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 28 8.7
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 28 8.7
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 28 8.7
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 28 8.7
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 45.6 bits (103), Expect = 5e-05
Identities = 29/91 (31%), Positives = 33/91 (36%)
Frame = +1
Query: 544 GAXVSPPXGGXXPXXPGGGAPQKXXF*GLAPXGPPXXTGPXFXXFXLRPPPPRXXNXKXP 723
G +PP G P P G+P +P PP P PPPP P
Sbjct: 227 GKRQAPPAGSPPPPPPPKGSPPLAG--SGSPPPPPAAGSPPPPRTGSPPPPPT--GSPPP 282
Query: 724 XXLXGGRPPGRAXXXSPXSXPXGTPPPASXP 816
G PP RA P P G+PP S P
Sbjct: 283 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 313
Score = 44.4 bits (100), Expect = 1e-04
Identities = 29/91 (31%), Positives = 33/91 (36%), Gaps = 1/91 (1%)
Frame = +1
Query: 559 PPXGGXXPXXPGGGAPQKXXF*GLAPXGPPXXTGPXFXXFXLRPPPPRXXNXKXPXXLXG 738
PP G P P GG+P G P PP P PPP+ P
Sbjct: 274 PPPTGSPPPPPAGGSPPPPRA-GSPPPPPPPRGSPPTGSL----PPPQAGGSPPPAGTGS 328
Query: 739 GRPPGRAXXXSP-XSXPXGTPPPASXPXXXP 828
PP R +P S P G+PP S P P
Sbjct: 329 PPPPPRQKRQAPERSPPTGSPPTGSPPTGRP 359
Score = 35.1 bits (77), Expect = 0.076
Identities = 35/138 (25%), Positives = 39/138 (28%), Gaps = 1/138 (0%)
Frame = -1
Query: 851 GFXGX-GQKGXXXGXEAGGGVPXGXEXGXXXXARPGGRPPXXXXGXFXXXXRGGGGRRXK 675
GF G GQ G G G G G + G G G G+R
Sbjct: 179 GFGGQNGQNGQNTGNNGGFGGNQGVTASGFGGQQQG-------FGQQQQTQNGFRGKRQA 231
Query: 674 XXKXGPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXXGPXXXGXGGXE 495
P P G+ P PPP G PP + P P P G
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGS-GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 290
Query: 494 GGPKXXPPPPXXGRXXXP 441
PPPP R P
Sbjct: 291 PPRAGSPPPPPPPRGSPP 308
Score = 33.5 bits (73), Expect = 0.23
Identities = 25/100 (25%), Positives = 28/100 (28%)
Frame = -1
Query: 752 PGGRPPXXXXGXFXXXXRGGGGRRXKXXKXGPVXXGGPXGAXP*KXIFWGAPPPGXXGKX 573
P G PP G G + P G P G+PPP G
Sbjct: 243 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPA-----GGSPPPPRAGSP 297
Query: 572 PPXGGETXAPXPNXXGPXXXGXGGXEGGPKXXPPPPXXGR 453
PP +P P G G PPPP R
Sbjct: 298 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKR 337
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/82 (26%), Positives = 24/82 (29%)
Frame = +1
Query: 625 GLAPXGPPXXTGPXFXXFXLRPPPPRXXNXKXPXXLXGGRPPGRAXXXSPXSXPXGTPPP 804
G P PP P PPPP + P G PP P PPP
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRT--GSPPPPPTGSPPPPPAGGSPPPP 292
Query: 805 ASXPXXXPFWPXPXXPXXPLFP 870
+ P P P L P
Sbjct: 293 RAGSPPPPPPPRGSPPTGSLPP 314
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Frame = +3
Query: 588 PRXGGPPKNXFLGXCPXXXPXXXRXXFXXFSPPPPXPPXXXX---KXPXSXAGGAPPGXG 758
PR G PP G P SPPPP PP P AGG+PP G
Sbjct: 267 PRTGSPPPPP-TGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 325
Score = 28.7 bits (61), Expect = 6.6
Identities = 18/65 (27%), Positives = 20/65 (30%), Gaps = 1/65 (1%)
Frame = -3
Query: 606 GGPPXGGXXXTXPXXGGNXSPXPKXXXAXGXXXR-GXGRGPKXKXPPPXXGAGXXXXKKX 430
G PP P G+ SP P R G P PPP G +
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 294
Query: 429 PXPPP 415
PPP
Sbjct: 295 GSPPP 299
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 45.6 bits (103), Expect = 5e-05
Identities = 29/91 (31%), Positives = 33/91 (36%)
Frame = +1
Query: 544 GAXVSPPXGGXXPXXPGGGAPQKXXF*GLAPXGPPXXTGPXFXXFXLRPPPPRXXNXKXP 723
G +PP G P P G+P +P PP P PPPP P
Sbjct: 248 GKRQAPPAGSPPPPPPPKGSPPLAG--SGSPPPPPAAGSPPPPRTGSPPPPPT--GSPPP 303
Query: 724 XXLXGGRPPGRAXXXSPXSXPXGTPPPASXP 816
G PP RA P P G+PP S P
Sbjct: 304 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 334
Score = 44.4 bits (100), Expect = 1e-04
Identities = 29/91 (31%), Positives = 33/91 (36%), Gaps = 1/91 (1%)
Frame = +1
Query: 559 PPXGGXXPXXPGGGAPQKXXF*GLAPXGPPXXTGPXFXXFXLRPPPPRXXNXKXPXXLXG 738
PP G P P GG+P G P PP P PPP+ P
Sbjct: 295 PPPTGSPPPPPAGGSPPPPRA-GSPPPPPPPRGSPPTGSL----PPPQAGGSPPPAGTGS 349
Query: 739 GRPPGRAXXXSP-XSXPXGTPPPASXPXXXP 828
PP R +P S P G+PP S P P
Sbjct: 350 PPPPPRQKRQAPERSPPTGSPPTGSPPTGRP 380
Score = 35.1 bits (77), Expect = 0.076
Identities = 35/138 (25%), Positives = 39/138 (28%), Gaps = 1/138 (0%)
Frame = -1
Query: 851 GFXGX-GQKGXXXGXEAGGGVPXGXEXGXXXXARPGGRPPXXXXGXFXXXXRGGGGRRXK 675
GF G GQ G G G G G + G G G G+R
Sbjct: 200 GFGGQNGQNGQNTGNNGGFGGNQGVTASGFGGQQQG-------FGQQQQTQNGFRGKRQA 252
Query: 674 XXKXGPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXXGPXXXGXGGXE 495
P P G+ P PPP G PP + P P P G
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGS-GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 311
Query: 494 GGPKXXPPPPXXGRXXXP 441
PPPP R P
Sbjct: 312 PPRAGSPPPPPPPRGSPP 329
Score = 33.5 bits (73), Expect = 0.23
Identities = 25/100 (25%), Positives = 28/100 (28%)
Frame = -1
Query: 752 PGGRPPXXXXGXFXXXXRGGGGRRXKXXKXGPVXXGGPXGAXP*KXIFWGAPPPGXXGKX 573
P G PP G G + P G P G+PPP G
Sbjct: 264 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPA-----GGSPPPPRAGSP 318
Query: 572 PPXGGETXAPXPNXXGPXXXGXGGXEGGPKXXPPPPXXGR 453
PP +P P G G PPPP R
Sbjct: 319 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKR 358
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/82 (26%), Positives = 24/82 (29%)
Frame = +1
Query: 625 GLAPXGPPXXTGPXFXXFXLRPPPPRXXNXKXPXXLXGGRPPGRAXXXSPXSXPXGTPPP 804
G P PP P PPPP + P G PP P PPP
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRT--GSPPPPPTGSPPPPPAGGSPPPP 313
Query: 805 ASXPXXXPFWPXPXXPXXPLFP 870
+ P P P L P
Sbjct: 314 RAGSPPPPPPPRGSPPTGSLPP 335
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Frame = +3
Query: 588 PRXGGPPKNXFLGXCPXXXPXXXRXXFXXFSPPPPXPPXXXX---KXPXSXAGGAPPGXG 758
PR G PP G P SPPPP PP P AGG+PP G
Sbjct: 288 PRTGSPPPPP-TGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 346
Score = 28.7 bits (61), Expect = 6.6
Identities = 18/65 (27%), Positives = 20/65 (30%), Gaps = 1/65 (1%)
Frame = -3
Query: 606 GGPPXGGXXXTXPXXGGNXSPXPKXXXAXGXXXR-GXGRGPKXKXPPPXXGAGXXXXKKX 430
G PP P G+ SP P R G P PPP G +
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 315
Query: 429 PXPPP 415
PPP
Sbjct: 316 GSPPP 320
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 45.6 bits (103), Expect = 5e-05
Identities = 29/91 (31%), Positives = 33/91 (36%)
Frame = +1
Query: 544 GAXVSPPXGGXXPXXPGGGAPQKXXF*GLAPXGPPXXTGPXFXXFXLRPPPPRXXNXKXP 723
G +PP G P P G+P +P PP P PPPP P
Sbjct: 233 GKRQAPPAGSPPPPPPPKGSPPLAG--SGSPPPPPAAGSPPPPRTGSPPPPPT--GSPPP 288
Query: 724 XXLXGGRPPGRAXXXSPXSXPXGTPPPASXP 816
G PP RA P P G+PP S P
Sbjct: 289 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 319
Score = 44.4 bits (100), Expect = 1e-04
Identities = 29/91 (31%), Positives = 33/91 (36%), Gaps = 1/91 (1%)
Frame = +1
Query: 559 PPXGGXXPXXPGGGAPQKXXF*GLAPXGPPXXTGPXFXXFXLRPPPPRXXNXKXPXXLXG 738
PP G P P GG+P G P PP P PPP+ P
Sbjct: 280 PPPTGSPPPPPAGGSPPPPRA-GSPPPPPPPRGSPPTGSL----PPPQAGGSPPPAGTGS 334
Query: 739 GRPPGRAXXXSP-XSXPXGTPPPASXPXXXP 828
PP R +P S P G+PP S P P
Sbjct: 335 PPPPPRQKRQAPERSPPTGSPPTGSPPTGRP 365
Score = 35.1 bits (77), Expect = 0.076
Identities = 35/138 (25%), Positives = 39/138 (28%), Gaps = 1/138 (0%)
Frame = -1
Query: 851 GFXGX-GQKGXXXGXEAGGGVPXGXEXGXXXXARPGGRPPXXXXGXFXXXXRGGGGRRXK 675
GF G GQ G G G G G + G G G G+R
Sbjct: 185 GFGGQNGQNGQNTGNNGGFGGNQGVTASGFGGQQQG-------FGQQQQTQNGFRGKRQA 237
Query: 674 XXKXGPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXXGPXXXGXGGXE 495
P P G+ P PPP G PP + P P P G
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGS-GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 296
Query: 494 GGPKXXPPPPXXGRXXXP 441
PPPP R P
Sbjct: 297 PPRAGSPPPPPPPRGSPP 314
Score = 33.5 bits (73), Expect = 0.23
Identities = 25/100 (25%), Positives = 28/100 (28%)
Frame = -1
Query: 752 PGGRPPXXXXGXFXXXXRGGGGRRXKXXKXGPVXXGGPXGAXP*KXIFWGAPPPGXXGKX 573
P G PP G G + P G P G+PPP G
Sbjct: 249 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPA-----GGSPPPPRAGSP 303
Query: 572 PPXGGETXAPXPNXXGPXXXGXGGXEGGPKXXPPPPXXGR 453
PP +P P G G PPPP R
Sbjct: 304 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKR 343
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/82 (26%), Positives = 24/82 (29%)
Frame = +1
Query: 625 GLAPXGPPXXTGPXFXXFXLRPPPPRXXNXKXPXXLXGGRPPGRAXXXSPXSXPXGTPPP 804
G P PP P PPPP + P G PP P PPP
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRT--GSPPPPPTGSPPPPPAGGSPPPP 298
Query: 805 ASXPXXXPFWPXPXXPXXPLFP 870
+ P P P L P
Sbjct: 299 RAGSPPPPPPPRGSPPTGSLPP 320
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Frame = +3
Query: 588 PRXGGPPKNXFLGXCPXXXPXXXRXXFXXFSPPPPXPPXXXX---KXPXSXAGGAPPGXG 758
PR G PP G P SPPPP PP P AGG+PP G
Sbjct: 273 PRTGSPPPPP-TGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 331
Score = 28.7 bits (61), Expect = 6.6
Identities = 18/65 (27%), Positives = 20/65 (30%), Gaps = 1/65 (1%)
Frame = -3
Query: 606 GGPPXGGXXXTXPXXGGNXSPXPKXXXAXGXXXR-GXGRGPKXKXPPPXXGAGXXXXKKX 430
G PP P G+ SP P R G P PPP G +
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 300
Query: 429 PXPPP 415
PPP
Sbjct: 301 GSPPP 305
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 41.5 bits (93), Expect = 9e-04
Identities = 28/73 (38%), Positives = 29/73 (39%), Gaps = 4/73 (5%)
Frame = -1
Query: 662 GPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXXG----PXXXGXGGXE 495
GP P G P I G PPP G PP G P P G P GG +
Sbjct: 725 GPPPPPPPGGLPP---ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 781
Query: 494 GGPKXXPPPPXXG 456
GGP PPPP G
Sbjct: 782 GGP---PPPPPPG 791
Score = 37.5 bits (83), Expect = 0.014
Identities = 23/66 (34%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Frame = -1
Query: 659 PVXXGGPXGAXP*KXIFWGAPPPGXXGKXPP-XGGETXAPXPNXXGPXXXGXGGXEGGPK 483
P GGP I G PPP G PP GG P P P G P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 482 XXPPPP 465
PPPP
Sbjct: 767 GCPPPP 772
Score = 36.7 bits (81), Expect = 0.025
Identities = 34/112 (30%), Positives = 36/112 (32%)
Frame = +1
Query: 526 PXXFGXGAXVSPPXGGXXPXXPGGGAPQKXXF*GLAPXGPPXXTGPXFXXFXLRPPPPRX 705
P G+ PP G P PG P G P PP P PPPP
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPG--LPPITG--GPPPPPPPGGLPPITGG----PPPPPP 747
Query: 706 XNXKXPXXLXGGRPPGRAXXXSPXSXPXGTPPPASXPXXXPFWPXPXXPXXP 861
P + GG PP P P G PPP P F P P P
Sbjct: 748 PGGLPP--ISGGPPP-------PPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 32.7 bits (71), Expect = 0.41
Identities = 28/108 (25%), Positives = 29/108 (26%), Gaps = 1/108 (0%)
Frame = +3
Query: 378 PPVXFLFXSPR-SAGGGXGXFLXXXXPPPXXGGGXXFWAPFPXPXPXXXXXXXXXXXXXX 554
PP +P SAGG PPP G P P P P
Sbjct: 687 PPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP 746
Query: 555 XXXXXXXFXXXPRXGGPPKNXFLGXCPXXXPXXXRXXFXXFSPPPPXP 698
P PP G CP P F PPPP P
Sbjct: 747 PPGGLPPISGGPPPPPPPP----GGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 30.3 bits (65), Expect = 2.2
Identities = 26/92 (28%), Positives = 30/92 (32%)
Frame = +2
Query: 452 PAPXXGGGXFXLGPLPXPLSXXPXAXXXLGXGLXFPPXXGXVXXXPPXGGPPKKXXFRXL 631
P P G GP P P P + G PP G + P GGPP
Sbjct: 713 PPPPPGLPPITGGPPPPP---PPGGLPPITGGPPPPPPPGGLP--PISGGPPPPPPPPGG 767
Query: 632 PXXXPPPXPXPFFXXFXSAPXPPXIXIXNXPL 727
PPP P F P PP + P+
Sbjct: 768 CPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPV 799
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 41.5 bits (93), Expect = 9e-04
Identities = 28/73 (38%), Positives = 29/73 (39%), Gaps = 4/73 (5%)
Frame = -1
Query: 662 GPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXXG----PXXXGXGGXE 495
GP P G P I G PPP G PP G P P G P GG +
Sbjct: 725 GPPPPPPPGGLPP---ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 781
Query: 494 GGPKXXPPPPXXG 456
GGP PPPP G
Sbjct: 782 GGP---PPPPPPG 791
Score = 37.5 bits (83), Expect = 0.014
Identities = 23/66 (34%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Frame = -1
Query: 659 PVXXGGPXGAXP*KXIFWGAPPPGXXGKXPP-XGGETXAPXPNXXGPXXXGXGGXEGGPK 483
P GGP I G PPP G PP GG P P P G P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 482 XXPPPP 465
PPPP
Sbjct: 767 GCPPPP 772
Score = 36.7 bits (81), Expect = 0.025
Identities = 34/112 (30%), Positives = 36/112 (32%)
Frame = +1
Query: 526 PXXFGXGAXVSPPXGGXXPXXPGGGAPQKXXF*GLAPXGPPXXTGPXFXXFXLRPPPPRX 705
P G+ PP G P PG P G P PP P PPPP
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPG--LPPITG--GPPPPPPPGGLPPITGG----PPPPPP 747
Query: 706 XNXKXPXXLXGGRPPGRAXXXSPXSXPXGTPPPASXPXXXPFWPXPXXPXXP 861
P + GG PP P P G PPP P F P P P
Sbjct: 748 PGGLPP--ISGGPPP-------PPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 32.7 bits (71), Expect = 0.41
Identities = 28/108 (25%), Positives = 29/108 (26%), Gaps = 1/108 (0%)
Frame = +3
Query: 378 PPVXFLFXSPR-SAGGGXGXFLXXXXPPPXXGGGXXFWAPFPXPXPXXXXXXXXXXXXXX 554
PP +P SAGG PPP G P P P P
Sbjct: 687 PPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP 746
Query: 555 XXXXXXXFXXXPRXGGPPKNXFLGXCPXXXPXXXRXXFXXFSPPPPXP 698
P PP G CP P F PPPP P
Sbjct: 747 PPGGLPPISGGPPPPPPPP----GGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 30.3 bits (65), Expect = 2.2
Identities = 26/92 (28%), Positives = 30/92 (32%)
Frame = +2
Query: 452 PAPXXGGGXFXLGPLPXPLSXXPXAXXXLGXGLXFPPXXGXVXXXPPXGGPPKKXXFRXL 631
P P G GP P P P + G PP G + P GGPP
Sbjct: 713 PPPPPGLPPITGGPPPPP---PPGGLPPITGGPPPPPPPGGLP--PISGGPPPPPPPPGG 767
Query: 632 PXXXPPPXPXPFFXXFXSAPXPPXIXIXNXPL 727
PPP P F P PP + P+
Sbjct: 768 CPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPV 799
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 41.5 bits (93), Expect = 9e-04
Identities = 28/73 (38%), Positives = 29/73 (39%), Gaps = 4/73 (5%)
Frame = -1
Query: 662 GPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXXG----PXXXGXGGXE 495
GP P G P I G PPP G PP G P P G P GG +
Sbjct: 308 GPPPPPPPGGLPP---ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 364
Query: 494 GGPKXXPPPPXXG 456
GGP PPPP G
Sbjct: 365 GGP---PPPPPPG 374
Score = 37.5 bits (83), Expect = 0.014
Identities = 23/66 (34%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Frame = -1
Query: 659 PVXXGGPXGAXP*KXIFWGAPPPGXXGKXPP-XGGETXAPXPNXXGPXXXGXGGXEGGPK 483
P GGP I G PPP G PP GG P P P G P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 349
Query: 482 XXPPPP 465
PPPP
Sbjct: 350 GCPPPP 355
Score = 36.7 bits (81), Expect = 0.025
Identities = 34/112 (30%), Positives = 36/112 (32%)
Frame = +1
Query: 526 PXXFGXGAXVSPPXGGXXPXXPGGGAPQKXXF*GLAPXGPPXXTGPXFXXFXLRPPPPRX 705
P G+ PP G P PG P G P PP P PPPP
Sbjct: 279 PSTSAGGSSALPPITGGPPPPPG--LPPITG--GPPPPPPPGGLPPITGG----PPPPPP 330
Query: 706 XNXKXPXXLXGGRPPGRAXXXSPXSXPXGTPPPASXPXXXPFWPXPXXPXXP 861
P + GG PP P P G PPP P F P P P
Sbjct: 331 PGGLPP--ISGGPPP-------PPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 32.7 bits (71), Expect = 0.41
Identities = 28/108 (25%), Positives = 29/108 (26%), Gaps = 1/108 (0%)
Frame = +3
Query: 378 PPVXFLFXSPR-SAGGGXGXFLXXXXPPPXXGGGXXFWAPFPXPXPXXXXXXXXXXXXXX 554
PP +P SAGG PPP G P P P P
Sbjct: 270 PPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP 329
Query: 555 XXXXXXXFXXXPRXGGPPKNXFLGXCPXXXPXXXRXXFXXFSPPPPXP 698
P PP G CP P F PPPP P
Sbjct: 330 PPGGLPPISGGPPPPPPPP----GGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 30.3 bits (65), Expect = 2.2
Identities = 26/92 (28%), Positives = 30/92 (32%)
Frame = +2
Query: 452 PAPXXGGGXFXLGPLPXPLSXXPXAXXXLGXGLXFPPXXGXVXXXPPXGGPPKKXXFRXL 631
P P G GP P P P + G PP G + P GGPP
Sbjct: 296 PPPPPGLPPITGGPPPPP---PPGGLPPITGGPPPPPPPGGLP--PISGGPPPPPPPPGG 350
Query: 632 PXXXPPPXPXPFFXXFXSAPXPPXIXIXNXPL 727
PPP P F P PP + P+
Sbjct: 351 CPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPV 382
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 37.5 bits (83), Expect = 0.014
Identities = 31/105 (29%), Positives = 35/105 (33%), Gaps = 2/105 (1%)
Frame = +1
Query: 553 VSPPXGGXXPXXPGGGA-PQKXXF*GLAPXGPPXXT-GPXFXXFXLRPPPPRXXNXKXPX 726
+ P GG P P G+ P G P GP GP R PP P
Sbjct: 225 IPPGTGGFPPGQPTAGSFPPGPQVPGSYPSGPADIPQGPGMP----RAFPPGASAPVAPG 280
Query: 727 XLXGGRPPGRAXXXSPXSXPXGTPPPASXPXXXPFWPXPXXPXXP 861
+ G PPG+ P S P G P P F P P P
Sbjct: 281 -MPGAFPPGQGGPGMPGSFPPGAPGPGGPGMPGSFAPGAPGPGGP 324
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/53 (35%), Positives = 19/53 (35%), Gaps = 6/53 (11%)
Frame = -1
Query: 605 GAPPPGXXGKXPPXGGETXAPXPNXXG------PXXXGXGGXEGGPKXXPPPP 465
GA PPG G P AP P G P G GG G P P P
Sbjct: 283 GAFPPGQGGPGMPGSFPPGAPGPGGPGMPGSFAPGAPGPGGPGGYPSGGPGMP 335
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 37.1 bits (82), Expect = 0.019
Identities = 36/134 (26%), Positives = 38/134 (28%), Gaps = 2/134 (1%)
Frame = -1
Query: 851 GFXGXGQKGXXXGXEAGGGVPXGXEXGXXXXARPGGRPPXXXXGXFXXXXRGGGGRRXKX 672
G G G G G GGG G G PG P G + G
Sbjct: 86 GAGGGGGYGAGGGGGGGGGEAAGGGGGCTGCCNPGPPGPGGRPGKPGTPGKPGAPGNPGA 145
Query: 671 XKXGPVXXGGPXGAXP*KXIFWGAP-PPGXXGKXPPXGGETXAPXP-NXXGPXXXGXGGX 498
G P P + G P PPG G GG A P GP G G
Sbjct: 146 SGKGAAAPCEPSTPPPCQPCPAGPPGPPGPDGTPGEPGGPGPAGSPAGPSGPGPAGPPGP 205
Query: 497 EGGPKXXPPPPXXG 456
G P P G
Sbjct: 206 AGPPGNDGQPGQPG 219
Score = 33.9 bits (74), Expect = 0.18
Identities = 35/136 (25%), Positives = 37/136 (27%), Gaps = 1/136 (0%)
Frame = -1
Query: 860 GXXGFXGXGQKGXXXGXEAGGGVPXGXEXGXXXXARPGGRPPXXXXGXFXXXXRGGGGRR 681
G G G K G G P G P PP G G
Sbjct: 120 GPPGPGGRPGKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPPCQPCPAGPPGPPGPDGTP 179
Query: 680 XKXXKXGPVXX-GGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXXGPXXXGXG 504
+ GP GP G P A PPG G P G + P G
Sbjct: 180 GEPGGPGPAGSPAGPSGPGP-------AGPPGPAG---PPGNDGQPGQPGGPGQDGASSA 229
Query: 503 GXEGGPKXXPPPPXXG 456
G E GP PP G
Sbjct: 230 GGEAGPGPAGPPGPAG 245
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 4/51 (7%)
Frame = +1
Query: 523 GPXXFGXGAXVSPPXGGXXPXXPGG----GAPQKXXF*GLAPXGPPXXTGP 663
GP G PP P PGG GA G P GPP GP
Sbjct: 196 GPGPAGPPGPAGPPGNDGQPGQPGGPGQDGASSAGGEAGPGPAGPPGPAGP 246
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 36.7 bits (81), Expect = 0.025
Identities = 36/133 (27%), Positives = 42/133 (31%), Gaps = 1/133 (0%)
Frame = -1
Query: 884 PPPXRGXRGXXGFXGXGQKGXXXGXEAGGGVPXGXEXGXXXXARPGGRPPXXXXGXFXXX 705
PP RG +G G G + G G P G PG + G
Sbjct: 148 PPGTRGPQGEVGRPGQTGESGHPGLPGRPGKP-GRVGDAGPQGEPGEQGEPGIKGPPGDD 206
Query: 704 XRGGGGRRXKXXKXGPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXXG 525
GG G + GP GP G+ G PPG G+ P G P G
Sbjct: 207 SIGGTGIKGPPGPPGPRGPKGPPGSNGLPSQNSG--PPGPIGEMGPPGPPGPRGEPGPPG 264
Query: 524 P-XXXGXGGXEGG 489
P G G GG
Sbjct: 265 PFGPPGDSGEPGG 277
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
Frame = -1
Query: 596 PPGXXGKXPPXG--GETXAPXPNXXGPXXXGXGGXEG--GPKXXPPPP 465
PPG G P G G P N P G G G GP+ P PP
Sbjct: 216 PPGPPGPRGPKGPPGSNGLPSQNSGPPGPIGEMGPPGPPGPRGEPGPP 263
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 36.7 bits (81), Expect = 0.025
Identities = 36/133 (27%), Positives = 42/133 (31%), Gaps = 1/133 (0%)
Frame = -1
Query: 884 PPPXRGXRGXXGFXGXGQKGXXXGXEAGGGVPXGXEXGXXXXARPGGRPPXXXXGXFXXX 705
PP RG +G G G + G G P G PG + G
Sbjct: 148 PPGTRGPQGEVGRPGQTGESGHPGLPGRPGKP-GRVGDAGPQGEPGEQGEPGIKGPPGDD 206
Query: 704 XRGGGGRRXKXXKXGPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXXG 525
GG G + GP GP G+ G PPG G+ P G P G
Sbjct: 207 SIGGTGIKGPPGPPGPRGPKGPPGSNGLPSQNSG--PPGPIGEMGPPGPPGPRGEPGPPG 264
Query: 524 P-XXXGXGGXEGG 489
P G G GG
Sbjct: 265 PFGPPGDSGEPGG 277
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
Frame = -1
Query: 596 PPGXXGKXPPXG--GETXAPXPNXXGPXXXGXGGXEG--GPKXXPPPP 465
PPG G P G G P N P G G G GP+ P PP
Sbjct: 216 PPGPPGPRGPKGPPGSNGLPSQNSGPPGPIGEMGPPGPPGPRGEPGPP 263
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 36.7 bits (81), Expect = 0.025
Identities = 29/91 (31%), Positives = 34/91 (37%)
Frame = +1
Query: 589 PGGGAPQKXXF*GLAPXGPPXXTGPXFXXFXLRPPPPRXXNXKXPXXLXGGRPPGRAXXX 768
P GAPQ+ G P GPP GP F PPP+ + P G PP +
Sbjct: 322 PPQGAPQQGF--GAPPQGPPQG-GPPQGSFGA--PPPQQFHAPSPQSFGGPPPPVSSAPG 376
Query: 769 SPXSXPXGTPPPASXPXXXPFWPXPXXPXXP 861
+ P PP A P F P P P
Sbjct: 377 NFAPPPQSGPPGAFAPPPSAF-GAPQGPGGP 406
Score = 34.7 bits (76), Expect = 0.10
Identities = 19/50 (38%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = -1
Query: 602 APPPGXXGKXPPXGGETXAPXPNXXGPXXXG-XGGXEGGPKXXPPPPXXG 456
APPP G GG P GP G G +GGP PPP G
Sbjct: 391 APPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGG 440
Score = 33.9 bits (74), Expect = 0.18
Identities = 43/152 (28%), Positives = 47/152 (30%), Gaps = 10/152 (6%)
Frame = -1
Query: 881 PPXRGXRGXXGFXGXGQKGXXXGXEAGG-GVPXGXEXGXXXXARPGGRPPXXXX--GXFX 711
PP +G GF Q G G G P + GG PP G F
Sbjct: 321 PPPQGAP-QQGFGAPPQGPPQGGPPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFA 379
Query: 710 XXXRGG--GGRRXKXXKXG-PVXXGGPXGAXP*KXIFWGAPPPGXXGKX----PPXGGET 552
+ G G G P GGP G +G PPPG G PP GG
Sbjct: 380 PPPQSGPPGAFAPPPSAFGAPQGPGGPGG--------YGPPPPGGPGAPGSYGPPQGGPG 431
Query: 551 XAPXPNXXGPXXXGXGGXEGGPKXXPPPPXXG 456
P GP G P PPP G
Sbjct: 432 GFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAG 463
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/65 (30%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Frame = -1
Query: 662 GPVXXGGPXGAXP*KXIFWGAPP--PGXXGKXPPXGGETXAPXPNXXGPXXXGXGGXEGG 489
GP G P P +G P PG G PP G P P P G G
Sbjct: 405 GPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAGA 464
Query: 488 PKXXP 474
P P
Sbjct: 465 PGGNP 469
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 36.3 bits (80), Expect = 0.033
Identities = 31/104 (29%), Positives = 34/104 (32%), Gaps = 3/104 (2%)
Frame = +1
Query: 559 PPXGGXXPXXPG---GGAPQKXXF*GLAPXGPPXXTGPXFXXFXLRPPPPRXXNXKXPXX 729
PP G P P G P G+ P PP GP PPPP + P
Sbjct: 290 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP---GMRYPGG 346
Query: 730 LXGGRPPGRAXXXSPXSXPXGTPPPASXPXXXPFWPXPXXPXXP 861
+ PP R P P PPP S P P P P
Sbjct: 347 MP-PPPPPRYPSAGPGMYP---PPPPSRPPAPPSGHGMIPPPPP 386
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/79 (26%), Positives = 23/79 (29%)
Frame = +1
Query: 625 GLAPXGPPXXTGPXFXXFXLRPPPPRXXNXKXPXXLXGGRPPGRAXXXSPXSXPXGTPPP 804
G+ P PP P PPPP P + G PP P PPP
Sbjct: 282 GMTPRPPP----PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 337
Query: 805 ASXPXXXPFWPXPXXPXXP 861
P P P P
Sbjct: 338 PPGMRYPGGMPPPPPPRYP 356
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = -1
Query: 608 WGAPPPGXXGKXPPXGGETXAPXPNXXGPXXXGXGGXEGGPKXXPPPP 465
W PPP G+ P G P P P G G G P PPPP
Sbjct: 296 WPPPPPPPPGRTPGPPGMPGMPPP--PPPSRFGPPGMGGMP--PPPPP 339
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 36.3 bits (80), Expect = 0.033
Identities = 31/104 (29%), Positives = 34/104 (32%), Gaps = 3/104 (2%)
Frame = +1
Query: 559 PPXGGXXPXXPG---GGAPQKXXF*GLAPXGPPXXTGPXFXXFXLRPPPPRXXNXKXPXX 729
PP G P P G P G+ P PP GP PPPP + P
Sbjct: 300 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP---GMRYPGG 356
Query: 730 LXGGRPPGRAXXXSPXSXPXGTPPPASXPXXXPFWPXPXXPXXP 861
+ PP R P P PPP S P P P P
Sbjct: 357 MP-PPPPPRYPSAGPGMYP---PPPPSRPPAPPSGHGMIPPPPP 396
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/79 (26%), Positives = 23/79 (29%)
Frame = +1
Query: 625 GLAPXGPPXXTGPXFXXFXLRPPPPRXXNXKXPXXLXGGRPPGRAXXXSPXSXPXGTPPP 804
G+ P PP P PPPP P + G PP P PPP
Sbjct: 292 GMTPRPPP----PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 347
Query: 805 ASXPXXXPFWPXPXXPXXP 861
P P P P
Sbjct: 348 PPGMRYPGGMPPPPPPRYP 366
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = -1
Query: 608 WGAPPPGXXGKXPPXGGETXAPXPNXXGPXXXGXGGXEGGPKXXPPPP 465
W PPP G+ P G P P P G G G P PPPP
Sbjct: 306 WPPPPPPPPGRTPGPPGMPGMPPP--PPPSRFGPPGMGGMP--PPPPP 349
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 35.9 bits (79), Expect = 0.044
Identities = 30/104 (28%), Positives = 33/104 (31%)
Frame = -1
Query: 869 GXRGXXGFXGXGQKGXXXGXEAGGGVPXGXEXGXXXXARPGGRPPXXXXGXFXXXXRGGG 690
G G G+ G G G G GGG+ G G GG G + GGG
Sbjct: 145 GGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGY-GGGMGGG 203
Query: 689 GRRXKXXKXGPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGG 558
G G GG G P G P G G GG
Sbjct: 204 GYGGGGMGGGGYGGGGDGGYGPSGGYGGGYGPGGGYGMGGGGGG 247
Score = 30.7 bits (66), Expect = 1.6
Identities = 35/124 (28%), Positives = 38/124 (30%)
Frame = -1
Query: 860 GXXGFXGXGQKGXXXGXEAGGGVPXGXEXGXXXXARPGGRPPXXXXGXFXXXXRGGGGRR 681
G G G G G G GGG G G GG G + GGGG
Sbjct: 135 GGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGG-- 192
Query: 680 XKXXKXGPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXXGPXXXGXGG 501
G + GG G + G G G P GG P G G GG
Sbjct: 193 -MGGYGGGMGGGGYGGG----GMGGGGYGGGGDGGYGPSGGYGGGYGPG--GGYGMGGGG 245
Query: 500 XEGG 489
GG
Sbjct: 246 GGGG 249
>Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical
protein F15A2.1 protein.
Length = 291
Score = 34.3 bits (75), Expect = 0.13
Identities = 36/114 (31%), Positives = 37/114 (32%), Gaps = 4/114 (3%)
Frame = -1
Query: 815 GXEAGGGVPXGXEXGXXXXARPGGRPPXXXXGXFXXXXRGGGGRRXKXXKXGPVXXGGPX 636
G EAG P G E G P G PP G G K GPV GP
Sbjct: 148 GGEAGPPGPDG-EPGVRG---PNG-PPGPNGHPGQPGRPGPAGPAGPEGKDGPVGPHGPA 202
Query: 635 GAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXXG----PXXXGXGGXEGGP 486
G + A PG G P G E P G P G GG G P
Sbjct: 203 GPAGPRGTRHSAGVPGKPGDVGPCGPEGPKGAPGTPGKNGAPGDRGFGGQPGVP 256
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 34.3 bits (75), Expect = 0.13
Identities = 36/119 (30%), Positives = 41/119 (34%), Gaps = 19/119 (15%)
Frame = +1
Query: 511 PXXXGPXXFGXGAXVSPPXGGXXPXXPG----GGAPQKXXF*GLAPX----------GPP 648
P GP F G P G P G GG PQ+ G+ P GPP
Sbjct: 1497 PMRGGPPMF-RGGPPGPGRGMPSPMMRGSSMRGGFPQRGGGPGMGPSQYYHDSPQNRGPP 1555
Query: 649 XXTGPX----FXXFXLRPPPPRXXNX-KXPXXLXGGRPPGRAXXXSPXSXPXGTPPPAS 810
P + PPPPR + + P L GG PP P G PPP S
Sbjct: 1556 MGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGGPPPPS 1614
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 33.9 bits (74), Expect = 0.18
Identities = 31/108 (28%), Positives = 33/108 (30%), Gaps = 1/108 (0%)
Frame = +2
Query: 377 PPXXXSFXFSPVRGGGXGXFFXXXXPAPXXGGGXFXLGPLPXPLSXXPXAXXXLGXGLXF 556
PP + +P GG G F AP GG P P S P
Sbjct: 451 PPGPFNPSGAPPSGGPPGPF--NPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGA--- 505
Query: 557 PPXXGXVXXXPPXGGPPKKXXFRXLPXXXPPPXPXP-FFXXFXSAPXP 697
PP G P G PP LP P P P FF P P
Sbjct: 506 PPSGGPPGPFDPSGAPPSGMPPVPLPTDLPIPSESPSFFQWIFGRPKP 553
Score = 32.7 bits (71), Expect = 0.41
Identities = 28/98 (28%), Positives = 30/98 (30%), Gaps = 2/98 (2%)
Frame = +2
Query: 377 PPXXXSFXFSPVRGGGXGXFFXXXXPAPXXGGGXFXLGPLPXPLSXXPXAXXXLGXGLXF 556
PP + +P GG G F AP GG P P S P
Sbjct: 436 PPGPFNPSGAPPSGGPPGPF--NPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPS 493
Query: 557 --PPXXGXVXXXPPXGGPPKKXXFRXLPXXXPPPXPXP 664
PP PP GGPP P PP P P
Sbjct: 494 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGMPPVPLP 531
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/67 (32%), Positives = 24/67 (35%), Gaps = 2/67 (2%)
Frame = -1
Query: 662 GPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXXGPXXXGXG--GXEGG 489
GP GP GA P G P P + PP GG T P+ P G G
Sbjct: 180 GPPGPFGPSGAPP----SGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGA 235
Query: 488 PKXXPPP 468
P PP
Sbjct: 236 PPSGGPP 242
Score = 30.3 bits (65), Expect = 2.2
Identities = 27/96 (28%), Positives = 28/96 (29%), Gaps = 2/96 (2%)
Frame = +2
Query: 377 PPXXXSFXFSPVRGGGXGXFFXXXXPAPXXGGGXFXLGPLPXPLSXXPXAXXXLGXGLXF 556
PP +P GG G F AP GG P P S P
Sbjct: 166 PPGLFDPSGAPPSGGPPGPF--GPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPS 223
Query: 557 --PPXXGXVXXXPPXGGPPKKXXFRXLPXXXPPPXP 658
PP PP GGPP P PP P
Sbjct: 224 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGP 259
Score = 30.3 bits (65), Expect = 2.2
Identities = 27/96 (28%), Positives = 29/96 (30%), Gaps = 2/96 (2%)
Frame = +2
Query: 377 PPXXXSFXFSPVRGGGXGXFFXXXXPAPXXGGGXFXLGPLPXPLSXXPXAXXXLGXGLXF 556
PP + +P GG G F AP GG P P S P
Sbjct: 196 PPGPFNPSEAPPSGGPTGPF--DPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPS 253
Query: 557 --PPXXGXVXXXPPXGGPPKKXXFRXLPXXXPPPXP 658
PP PP GGPP P PP P
Sbjct: 254 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGP 289
Score = 30.3 bits (65), Expect = 2.2
Identities = 27/96 (28%), Positives = 29/96 (30%), Gaps = 2/96 (2%)
Frame = +2
Query: 377 PPXXXSFXFSPVRGGGXGXFFXXXXPAPXXGGGXFXLGPLPXPLSXXPXAXXXLGXGLXF 556
PP + +P GG G F AP GG P P S P
Sbjct: 256 PPGPFNPSGAPPSGGPPGPF--DPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPS 313
Query: 557 --PPXXGXVXXXPPXGGPPKKXXFRXLPXXXPPPXP 658
PP PP GGPP P PP P
Sbjct: 314 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGP 349
Score = 30.3 bits (65), Expect = 2.2
Identities = 27/96 (28%), Positives = 29/96 (30%), Gaps = 2/96 (2%)
Frame = +2
Query: 377 PPXXXSFXFSPVRGGGXGXFFXXXXPAPXXGGGXFXLGPLPXPLSXXPXAXXXLGXGLXF 556
PP + +P GG G F AP GG P P S P
Sbjct: 316 PPGPFNPSGAPPSGGPPGPF--DPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPS 373
Query: 557 --PPXXGXVXXXPPXGGPPKKXXFRXLPXXXPPPXP 658
PP PP GGPP P PP P
Sbjct: 374 GGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGP 409
Score = 29.9 bits (64), Expect = 2.9
Identities = 27/96 (28%), Positives = 28/96 (29%), Gaps = 2/96 (2%)
Frame = +2
Query: 377 PPXXXSFXFSPVRGGGXGXFFXXXXPAPXXGGGXFXLGPLPXPLSXXPXAXXXLGXGLXF 556
PP +P GG G F AP GG P P S P
Sbjct: 181 PPGPFGPSGAPPSGGPPGPF--NPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPS 238
Query: 557 --PPXXGXVXXXPPXGGPPKKXXFRXLPXXXPPPXP 658
PP PP GGPP P PP P
Sbjct: 239 GGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGP 274
Score = 29.9 bits (64), Expect = 2.9
Identities = 27/96 (28%), Positives = 29/96 (30%), Gaps = 2/96 (2%)
Frame = +2
Query: 377 PPXXXSFXFSPVRGGGXGXFFXXXXPAPXXGGGXFXLGPLPXPLSXXPXAXXXLGXGLXF 556
PP + +P GG G F AP GG P P S P
Sbjct: 346 PPGPFNPSGAPPSGGPPGPF--DPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPS 403
Query: 557 --PPXXGXVXXXPPXGGPPKKXXFRXLPXXXPPPXP 658
PP PP GGPP P PP P
Sbjct: 404 GGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGP 439
Score = 29.5 bits (63), Expect = 3.8
Identities = 27/96 (28%), Positives = 28/96 (29%), Gaps = 2/96 (2%)
Frame = +2
Query: 377 PPXXXSFXFSPVRGGGXGXFFXXXXPAPXXGGGXFXLGPLPXPLSXXPXAXXXLGXGLXF 556
PP +P GG G F AP GG P P S P
Sbjct: 331 PPGPFDPSGAPPSGGPPGPF--NPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPS 388
Query: 557 --PPXXGXVXXXPPXGGPPKKXXFRXLPXXXPPPXP 658
PP PP GGPP P PP P
Sbjct: 389 GGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGP 424
Score = 29.5 bits (63), Expect = 3.8
Identities = 27/96 (28%), Positives = 28/96 (29%), Gaps = 2/96 (2%)
Frame = +2
Query: 377 PPXXXSFXFSPVRGGGXGXFFXXXXPAPXXGGGXFXLGPLPXPLSXXPXAXXXLGXGLXF 556
PP +P GG G F AP GG P P S P
Sbjct: 361 PPGPFDPSGAPPSGGPPGPF--DPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPS 418
Query: 557 --PPXXGXVXXXPPXGGPPKKXXFRXLPXXXPPPXP 658
PP PP GGPP P PP P
Sbjct: 419 GGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGP 454
Score = 28.3 bits (60), Expect = 8.7
Identities = 25/87 (28%), Positives = 26/87 (29%), Gaps = 2/87 (2%)
Frame = +2
Query: 404 SPVRGGGXGXFFXXXXPAPXXGGGXFXLGPLPXPLSXXPXAXXXLGXGLXF--PPXXGXV 577
+P GG G F AP GG P P S P PP
Sbjct: 220 APPSGGPPGPF--NPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDP 277
Query: 578 XXXPPXGGPPKKXXFRXLPXXXPPPXP 658
PP GGPP P PP P
Sbjct: 278 SGAPPSGGPPGPFDPSGAPPSGGPPGP 304
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 33.5 bits (73), Expect = 0.23
Identities = 19/64 (29%), Positives = 21/64 (32%), Gaps = 3/64 (4%)
Frame = +1
Query: 688 PPPPRXXNXKXPXXLXGGR---PPGRAXXXSPXSXPXGTPPPASXPXXXPFWPXPXXPXX 858
PPPP P + G PP P G PPP P P P P
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRPKT 134
Query: 859 PLFP 870
P+ P
Sbjct: 135 PVNP 138
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = +1
Query: 580 PXXPGGGAPQKXXF*GLAPXGPPXXTG--PXFXXFXLRPPPP 699
P PGG P F G P PP G P F PPPP
Sbjct: 77 PPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPP 118
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 33.5 bits (73), Expect = 0.23
Identities = 36/133 (27%), Positives = 37/133 (27%), Gaps = 2/133 (1%)
Frame = -1
Query: 884 PPPXRGXRGXXGFXGX-GQKGXXXGXEAGGGVPXGXEXGXXXXARPGGRPPXXXXGXFXX 708
PP G G G G G G G G P G G G
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPG--PAGPPGPAGPAGNDGAPGAPGGPGEPGA 211
Query: 707 XXRGGGGRRXKXXKXGPVXXGGPXGAXP*KXIFWGAPPPGXXG-KXPPXGGETXAPXPNX 531
+GG G GP G GA G PG G K PP N
Sbjct: 212 SEQGGPGEPGPAGPPGPAGPAGNDGAP-------GTGGPGPAGPKGPPGAAGAPGADGNP 264
Query: 530 XGPXXXGXGGXEG 492
GP G G EG
Sbjct: 265 GGPGTAGKPGGEG 277
Score = 29.1 bits (62), Expect = 5.0
Identities = 28/111 (25%), Positives = 31/111 (27%), Gaps = 2/111 (1%)
Frame = +1
Query: 544 GAXVSPPXGGXXPXXPGGGAPQKXXF*GLAPXGPPXXTGPXFXXFXLRPP--PPRXXNXK 717
GA +P G P P P + P GPP GP P P
Sbjct: 126 GAPGNPGKGASAPCEPVTQPPCQP-----CPGGPPGPAGPAGPPGPPGPDGNPGSPAGPS 180
Query: 718 XPXXLXGGRPPGRAXXXSPXSXPXGTPPPASXPXXXPFWPXPXXPXXPLFP 870
P P G A P G P + P P P P P P
Sbjct: 181 GPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAGP 231
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 33.5 bits (73), Expect = 0.23
Identities = 36/133 (27%), Positives = 37/133 (27%), Gaps = 2/133 (1%)
Frame = -1
Query: 884 PPPXRGXRGXXGFXGX-GQKGXXXGXEAGGGVPXGXEXGXXXXARPGGRPPXXXXGXFXX 708
PP G G G G G G G G P G G G
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPG--PAGPPGPAGPAGNDGAPGAPGGPGEPGA 211
Query: 707 XXRGGGGRRXKXXKXGPVXXGGPXGAXP*KXIFWGAPPPGXXG-KXPPXGGETXAPXPNX 531
+GG G GP G GA G PG G K PP N
Sbjct: 212 SEQGGPGEPGPAGPPGPAGPAGNDGAP-------GTGGPGPAGPKGPPGAAGAPGADGNP 264
Query: 530 XGPXXXGXGGXEG 492
GP G G EG
Sbjct: 265 GGPGTAGKPGGEG 277
Score = 29.1 bits (62), Expect = 5.0
Identities = 28/111 (25%), Positives = 31/111 (27%), Gaps = 2/111 (1%)
Frame = +1
Query: 544 GAXVSPPXGGXXPXXPGGGAPQKXXF*GLAPXGPPXXTGPXFXXFXLRPP--PPRXXNXK 717
GA +P G P P P + P GPP GP P P
Sbjct: 126 GAPGNPGKGASAPCEPVTQPPCQP-----CPGGPPGPAGPAGPPGPPGPDGNPGSPAGPS 180
Query: 718 XPXXLXGGRPPGRAXXXSPXSXPXGTPPPASXPXXXPFWPXPXXPXXPLFP 870
P P G A P G P + P P P P P P
Sbjct: 181 GPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAGP 231
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 33.5 bits (73), Expect = 0.23
Identities = 36/133 (27%), Positives = 37/133 (27%), Gaps = 2/133 (1%)
Frame = -1
Query: 884 PPPXRGXRGXXGFXGX-GQKGXXXGXEAGGGVPXGXEXGXXXXARPGGRPPXXXXGXFXX 708
PP G G G G G G G G P G G G
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPG--PAGPPGPAGPAGNDGAPGAPGGPGEPGA 211
Query: 707 XXRGGGGRRXKXXKXGPVXXGGPXGAXP*KXIFWGAPPPGXXG-KXPPXGGETXAPXPNX 531
+GG G GP G GA G PG G K PP N
Sbjct: 212 SEQGGPGEPGPAGPPGPAGPAGNDGAP-------GTGGPGPAGPKGPPGAAGAPGADGNP 264
Query: 530 XGPXXXGXGGXEG 492
GP G G EG
Sbjct: 265 GGPGTAGKPGGEG 277
Score = 29.1 bits (62), Expect = 5.0
Identities = 28/111 (25%), Positives = 31/111 (27%), Gaps = 2/111 (1%)
Frame = +1
Query: 544 GAXVSPPXGGXXPXXPGGGAPQKXXF*GLAPXGPPXXTGPXFXXFXLRPP--PPRXXNXK 717
GA +P G P P P + P GPP GP P P
Sbjct: 126 GAPGNPGKGASAPCEPVTQPPCQP-----CPGGPPGPAGPAGPPGPPGPDGNPGSPAGPS 180
Query: 718 XPXXLXGGRPPGRAXXXSPXSXPXGTPPPASXPXXXPFWPXPXXPXXPLFP 870
P P G A P G P + P P P P P P
Sbjct: 181 GPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAGP 231
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 33.5 bits (73), Expect = 0.23
Identities = 36/133 (27%), Positives = 37/133 (27%), Gaps = 2/133 (1%)
Frame = -1
Query: 884 PPPXRGXRGXXGFXGX-GQKGXXXGXEAGGGVPXGXEXGXXXXARPGGRPPXXXXGXFXX 708
PP G G G G G G G G P G G G
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPG--PAGPPGPAGPAGNDGAPGAPGGPGEPGA 211
Query: 707 XXRGGGGRRXKXXKXGPVXXGGPXGAXP*KXIFWGAPPPGXXG-KXPPXGGETXAPXPNX 531
+GG G GP G GA G PG G K PP N
Sbjct: 212 SEQGGPGEPGPAGPPGPAGPAGNDGAP-------GTGGPGPAGPKGPPGAAGAPGADGNP 264
Query: 530 XGPXXXGXGGXEG 492
GP G G EG
Sbjct: 265 GGPGTAGKPGGEG 277
Score = 29.1 bits (62), Expect = 5.0
Identities = 28/111 (25%), Positives = 31/111 (27%), Gaps = 2/111 (1%)
Frame = +1
Query: 544 GAXVSPPXGGXXPXXPGGGAPQKXXF*GLAPXGPPXXTGPXFXXFXLRPP--PPRXXNXK 717
GA +P G P P P + P GPP GP P P
Sbjct: 126 GAPGNPGKGASAPCEPVTQPPCQP-----CPGGPPGPAGPAGPPGPPGPDGNPGSPAGPS 180
Query: 718 XPXXLXGGRPPGRAXXXSPXSXPXGTPPPASXPXXXPFWPXPXXPXXPLFP 870
P P G A P G P + P P P P P P
Sbjct: 181 GPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAGP 231
>AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen protein
45 protein.
Length = 327
Score = 33.5 bits (73), Expect = 0.23
Identities = 37/143 (25%), Positives = 43/143 (30%), Gaps = 4/143 (2%)
Frame = -1
Query: 884 PPPXRGXRGXXGFXGXGQKGXXXGXEAGGGVPXGXEXGXXXXARPG--GRPPXXXXGXFX 711
PP G G G G + G G P G PG GRP
Sbjct: 187 PPGPTGAPGDKGSRGYPGESGEPGTPGSAG-PKGNAGPAGPPGPPGYPGRPGETGDHGKT 245
Query: 710 XXXRGGGGRRXKXXKXGPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXG--GETXAPXP 537
G + + GP GP G PG G P G G+ AP P
Sbjct: 246 IAGEAPPGPPGRQGEMGPQGPPGPPGPRGKDGAGGEKGAPGDQGNPGPYGKPGQPGAPGP 305
Query: 536 NXXGPXXXGXGGXEGGPKXXPPP 468
+ G G +GG PPP
Sbjct: 306 D-------GSAGEKGGCDHCPPP 321
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = +1
Query: 511 PXXXGPXXFGXGAXVSPPXGGXXPXXPGGGAPQKXXF*GLAPXGPPXXTGPXFXXFXLRP 690
P GP G PP P PG G AP GPP G P
Sbjct: 212 PGSAGPK--GNAGPAGPPGPPGYPGRPGETGDHGKTIAGEAPPGPPGRQGEMGPQGPPGP 269
Query: 691 PPPR 702
P PR
Sbjct: 270 PGPR 273
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 32.7 bits (71), Expect = 0.41
Identities = 35/121 (28%), Positives = 38/121 (31%), Gaps = 4/121 (3%)
Frame = -1
Query: 791 PXGXEXGXXXXARPGGR--PPXXXXGXFXXXXRGGGGRRXKXXKXGPVXXGGPXGAXP*K 618
P G E G + GR PP G G GGR + GP G G K
Sbjct: 155 PPG-EVGPAGPSGDNGRKGPPGPPGGPGGPGEGGDGGRPGNPGRPGPAGPRGEPGTEY-K 212
Query: 617 XIFWGAP-PPGXXGKXPPXGGETXAPXPNXXG-PXXXGXGGXEGGPKXXPPPPXXGRXXX 444
G P PPG G+ P G G P G G G P P G
Sbjct: 213 PGQPGRPGPPGPRGEAGPAGQPGSPGNDGESGKPGNAGRPGPPGAPGKNGTPGVRGEDAA 272
Query: 443 P 441
P
Sbjct: 273 P 273
Score = 31.9 bits (69), Expect = 0.71
Identities = 38/133 (28%), Positives = 41/133 (30%)
Frame = -1
Query: 884 PPPXRGXRGXXGFXGXGQKGXXXGXEAGGGVPXGXEXGXXXXARPGGRPPXXXXGXFXXX 705
PP G RG G G G + G P G G GGRP
Sbjct: 146 PPGRPGPRGPPGEVGPAGPSGDNGRKGPPGPPGG--PGGPGEGGDGGRPGNPGRPG-PAG 202
Query: 704 XRGGGGRRXKXXKXGPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXXG 525
RG G K + G GP G A P G G P GE+ P N
Sbjct: 203 PRGEPGTEYKPGQPGRPGPPGPRGE---------AGPAGQPGS-PGNDGESGKPG-NAGR 251
Query: 524 PXXXGXGGXEGGP 486
P G G G P
Sbjct: 252 PGPPGAPGKNGTP 264
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 32.7 bits (71), Expect = 0.41
Identities = 33/126 (26%), Positives = 36/126 (28%)
Frame = -1
Query: 842 GXGQKGXXXGXEAGGGVPXGXEXGXXXXARPGGRPPXXXXGXFXXXXRGGGGRRXKXXKX 663
G G G GGG G P G PP G G+ + +
Sbjct: 105 GGGYAAGGGGGGGGGGGGGGCHCAAQASGCPAG-PPGPPGEAGTDGEPGQAGQDGQPGQA 163
Query: 662 GPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXXGPXXXGXGGXEGGPK 483
G G A I A PPG G P G A P GP GP
Sbjct: 164 GQADSGSSGQAC----ITCPAGPPGPPG---PDGNAGPAGAPGVPGPDGDAGSPPPPGPP 216
Query: 482 XXPPPP 465
P PP
Sbjct: 217 GPPGPP 222
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 32.3 bits (70), Expect = 0.54
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -1
Query: 602 APPPGXXGKXPPXGGETXAPXPNXXGPXXXGXGGXEGGPKXXPPPPXXG 456
APP G PP GG P P P GG P P P G
Sbjct: 772 APPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPG 820
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 32.3 bits (70), Expect = 0.54
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -1
Query: 602 APPPGXXGKXPPXGGETXAPXPNXXGPXXXGXGGXEGGPKXXPPPPXXG 456
APP G PP GG P P P GG P P P G
Sbjct: 772 APPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPG 820
>Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical
protein W03G11.1b protein.
Length = 279
Score = 31.9 bits (69), Expect = 0.71
Identities = 39/151 (25%), Positives = 46/151 (30%), Gaps = 3/151 (1%)
Frame = -1
Query: 884 PPPXRGXRGXXGFXGXGQKGXXXGXEAGGG--VPXGXEXGXXXXARPGGRPPXXXXGXFX 711
PP G G G G + G +A G P + P G PP
Sbjct: 93 PPGPPGFDGSAGKDGSNGRPGNPGEDADGDDYKPDASQFCFDCPEAPAG-PPGRPGPDGE 151
Query: 710 XXXRGGGGRRXKXXKXGPVXXGGPXGAXP*KXIFWGAP-PPGXXGKXPPXGGETXAPXPN 534
G GR + G GP G G P G G+ P GG AP P
Sbjct: 152 NGGAGEPGRDGLAGRPGARGSPGPRGPS-------GNPGADGPAGQLGPQGGSNVAPSP- 203
Query: 533 XXGPXXXGXGGXEGGPKXXPPPPXXGRXXXP 441
P G G +G P P G+ P
Sbjct: 204 AGEPGAPGAQGPKGPPGAAGRPGRDGQPGAP 234
>Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical
protein W03G11.1a protein.
Length = 332
Score = 31.9 bits (69), Expect = 0.71
Identities = 39/151 (25%), Positives = 46/151 (30%), Gaps = 3/151 (1%)
Frame = -1
Query: 884 PPPXRGXRGXXGFXGXGQKGXXXGXEAGGG--VPXGXEXGXXXXARPGGRPPXXXXGXFX 711
PP G G G G + G +A G P + P G PP
Sbjct: 146 PPGPPGFDGSAGKDGSNGRPGNPGEDADGDDYKPDASQFCFDCPEAPAG-PPGRPGPDGE 204
Query: 710 XXXRGGGGRRXKXXKXGPVXXGGPXGAXP*KXIFWGAP-PPGXXGKXPPXGGETXAPXPN 534
G GR + G GP G G P G G+ P GG AP P
Sbjct: 205 NGGAGEPGRDGLAGRPGARGSPGPRGPS-------GNPGADGPAGQLGPQGGSNVAPSP- 256
Query: 533 XXGPXXXGXGGXEGGPKXXPPPPXXGRXXXP 441
P G G +G P P G+ P
Sbjct: 257 AGEPGAPGAQGPKGPPGAAGRPGRDGQPGAP 287
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 31.5 bits (68), Expect = 0.94
Identities = 20/69 (28%), Positives = 21/69 (30%)
Frame = -1
Query: 662 GPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXXGPXXXGXGGXEGGPK 483
GP GP G PPG G P G + A P GP GP
Sbjct: 167 GPAGPAGPDGEAGSPAAPSPPGPPGPPGPAGPAGNDGAAGTPGPDGPAGESTYPEPAGPG 226
Query: 482 XXPPPPXXG 456
PP G
Sbjct: 227 PAGPPGPAG 235
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 31.5 bits (68), Expect = 0.94
Identities = 20/74 (27%), Positives = 24/74 (32%), Gaps = 3/74 (4%)
Frame = +1
Query: 640 GPPXXTGPXFXXFXLRPPPPRXXNXKXPXXLXGGRPPGRAXXXSPXSXPXGTPPPASXPX 819
GPP T F P P + P + G PP + P P PPP P
Sbjct: 108 GPPMPTPMPFPQHFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPP 167
Query: 820 XXP---FWPXPXXP 852
+ P P P
Sbjct: 168 APAPGVYMPPPGMP 181
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 31.5 bits (68), Expect = 0.94
Identities = 20/74 (27%), Positives = 24/74 (32%), Gaps = 3/74 (4%)
Frame = +1
Query: 640 GPPXXTGPXFXXFXLRPPPPRXXNXKXPXXLXGGRPPGRAXXXSPXSXPXGTPPPASXPX 819
GPP T F P P + P + G PP + P P PPP P
Sbjct: 108 GPPMPTPMPFPQHFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPP 167
Query: 820 XXP---FWPXPXXP 852
+ P P P
Sbjct: 168 APAPGVYMPPPGMP 181
>Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical
protein M18.1 protein.
Length = 337
Score = 31.5 bits (68), Expect = 0.94
Identities = 37/148 (25%), Positives = 44/148 (29%)
Frame = -1
Query: 884 PPPXRGXRGXXGFXGXGQKGXXXGXEAGGGVPXGXEXGXXXXARPGGRPPXXXXGXFXXX 705
PP G G G G + G + GVP A P G PP
Sbjct: 101 PPGPPGAPGEDGDHGLVGEDGTPGADGNLGVPLSANGCIVCPAGPPG-PPGQP------- 152
Query: 704 XRGGGGRRXKXXKXGPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXXG 525
G G+R + G GG GA + P G G+ G + P G
Sbjct: 153 --GQNGQRGSDGQPGQDAMGGGQGAPGPQG------PAGDNGQPGRPGNDGRPGAPGAPG 204
Query: 524 PXXXGXGGXEGGPKXXPPPPXXGRXXXP 441
G G G P PP G P
Sbjct: 205 TRSVGRPGTAGSPGPQGPPGQNGNDGQP 232
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 31.5 bits (68), Expect = 0.94
Identities = 25/87 (28%), Positives = 27/87 (31%), Gaps = 1/87 (1%)
Frame = -3
Query: 747 GAPPXQXXGXFXIXXXGGXGAEXKXXKXGXGX-GGGXXXGKXLKXXFLGGPPXGGXXXTX 571
GAPP + GG GA G G GGG + GGP GG
Sbjct: 279 GAPPPPSGSA--MGGGGGGGATSAYFGVGSGAMGGGGAGAQSAYFGVGGGPVGGGGGGAK 336
Query: 570 PXXGGNXSPXPKXXXAXGXXXRGXGRG 490
GG P G G G G
Sbjct: 337 SGGGGGGIPGQSVYMGAGGGGGGGGGG 363
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 31.5 bits (68), Expect = 0.94
Identities = 35/131 (26%), Positives = 37/131 (28%), Gaps = 2/131 (1%)
Frame = -1
Query: 842 GXGQKGXXXGXE-AGGGVPXGX-EXGXXXXARPGGRPPXXXXGXFXXXXRGGGGRRXKXX 669
G G+ G G GGG P G G R GGR G + GGG
Sbjct: 28 GPGRWGGWGGNRWGGGGGPGGWGNNGGGGWGRGGGR----GGGDWGGNNGGGGNWGGNGG 83
Query: 668 KXGPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXXGPXXXGXGGXEGG 489
G G G WG G G G N G GG GG
Sbjct: 84 GRGDWGGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGG 143
Query: 488 PKXXPPPPXXG 456
PP G
Sbjct: 144 DGRGPPGSNGG 154
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Frame = -1
Query: 602 APPPGXXGKXPPXGGETXAPXPNXXGPXXXGXGGXEGGPKXXP---PPPXXGRXXXP 441
APP G PP GG P P P GG P P P P G P
Sbjct: 772 APPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRVPTPSNGAPEIP 828
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 31.1 bits (67), Expect = 1.2
Identities = 30/127 (23%), Positives = 33/127 (25%)
Frame = -1
Query: 869 GXRGXXGFXGXGQKGXXXGXEAGGGVPXGXEXGXXXXARPGGRPPXXXXGXFXXXXRGGG 690
G G G G G GG G G GG G + GG
Sbjct: 131 GQGGWGGQQGGNSNAGGWGGSQGGQNGGGGRGGSGGQGGWGGSQDGGSQGGWGGQNGGGQ 190
Query: 689 GRRXKXXKXGPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXXGPXXXG 510
G GG G + G G G GG+ GP G
Sbjct: 191 GGNQGGGGGRGGNQGGEQGGWGGQGGSQGGSQGGSQGGWGNQGGQQGGGRGGQQGPGGWG 250
Query: 509 XGGXEGG 489
GG GG
Sbjct: 251 GGGRGGG 257
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/70 (32%), Positives = 24/70 (34%)
Frame = -1
Query: 698 GGGGRRXKXXKXGPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXXGPX 519
GGGG + P GGP G G PP PP G P P GP
Sbjct: 159 GGGG----DPRGPPGGMGGPPGHGG-----MGGPPGHGGQGGPPGHGGMGGPPPGQGGPG 209
Query: 518 XXGXGGXEGG 489
G G GG
Sbjct: 210 GPGGPGGPGG 219
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/70 (32%), Positives = 24/70 (34%)
Frame = -1
Query: 698 GGGGRRXKXXKXGPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXXGPX 519
GGGG + P GGP G G PP PP G P P GP
Sbjct: 439 GGGG----DPRGPPGGMGGPPGHGG-----MGGPPGHGGQGGPPGHGGMGGPPPGQGGPG 489
Query: 518 XXGXGGXEGG 489
G G GG
Sbjct: 490 GPGGPGGPGG 499
>U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protein
36 protein.
Length = 307
Score = 31.1 bits (67), Expect = 1.2
Identities = 38/137 (27%), Positives = 45/137 (32%), Gaps = 2/137 (1%)
Frame = -1
Query: 872 RGXRGXXGFXGXGQKGXXXGXEAGGGV--PXGXEXGXXXXARPGGRPPXXXXGXFXXXXR 699
+G +G G G Q+ G G+ P G G PG P G
Sbjct: 175 QGPKGPPGPKGKSQERAADGKNGEPGMIGPPGPPGGVGEPGPPG---PAGQPGRVIQVNG 231
Query: 698 GGGGRRXKXXKXGPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXXGPX 519
G + K P G P A + G PPG G P GG+ P P GP
Sbjct: 232 AAGPAGPRGVKGPPGPKGLPGIAGLTE--IGGQGPPGDAGGPGPVGGQ--GP-PGPQGP- 285
Query: 518 XXGXGGXEGGPKXXPPP 468
G G EG P P
Sbjct: 286 -QGPPGDEGSCDHCPEP 301
>L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen
protein.
Length = 307
Score = 31.1 bits (67), Expect = 1.2
Identities = 38/137 (27%), Positives = 45/137 (32%), Gaps = 2/137 (1%)
Frame = -1
Query: 872 RGXRGXXGFXGXGQKGXXXGXEAGGGV--PXGXEXGXXXXARPGGRPPXXXXGXFXXXXR 699
+G +G G G Q+ G G+ P G G PG P G
Sbjct: 175 QGPKGPPGPKGKSQERAADGKNGEPGMIGPPGPPGGVGEPGPPG---PAGQPGRVIQVNG 231
Query: 698 GGGGRRXKXXKXGPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXXGPX 519
G + K P G P A + G PPG G P GG+ P P GP
Sbjct: 232 AAGPAGPRGVKGPPGPKGLPGIAGLTE--IGGQGPPGDAGGPGPVGGQ--GP-PGPQGP- 285
Query: 518 XXGXGGXEGGPKXXPPP 468
G G EG P P
Sbjct: 286 -QGPPGDEGSCDHCPEP 301
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/87 (25%), Positives = 28/87 (32%), Gaps = 1/87 (1%)
Frame = -1
Query: 698 GGGGRRXKXXKXGPVXXGGPXGAXP*KXIFWGAPPP-GXXGKXPPXGGETXAPXPNXXGP 522
G G+ + + G G G P + PPP + PP + P N P
Sbjct: 119 GAPGKPGRPGRPGAGGLPGNPGRPPAQPCHPITPPPCRPCPQGPPGAPGSPGPQGNAGAP 178
Query: 521 XXXGXGGXEGGPKXXPPPPXXGRXXXP 441
G GG G P P G P
Sbjct: 179 GQPGHGGGSGAPGPAGPKGQRGAPGHP 205
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Frame = -1
Query: 602 APPPGXXGKXPPXGGETXAPXPNXXGPXXXGXGGXEGGPKXXP---PPPXXGRXXXP 441
APP G PP GG P P P GG P P P P G P
Sbjct: 772 APPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRVPTPSNGAPEIP 828
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = -1
Query: 605 GAPPPGXXGKXPPXGGETXAPXPNXXGPXXXGXGGXEGGPKXXPPP 468
G P PG G G++ P P P GG GGP P P
Sbjct: 46 GQPTPGDAGNPNSQAGDSGKPNPPAGDPTKLKPGG--GGPAGKPGP 89
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 30.3 bits (65), Expect = 2.2
Identities = 35/140 (25%), Positives = 37/140 (26%)
Frame = -1
Query: 860 GXXGFXGXGQKGXXXGXEAGGGVPXGXEXGXXXXARPGGRPPXXXXGXFXXXXRGGGGRR 681
G G G K G G+P G P P G GR
Sbjct: 107 GPPGAGGTPGKPGRPGAPGAWGMPGNPGKGGSGPCHPVVPTPCKPCPGGRPGPPGPPGRP 166
Query: 680 XKXXKXGPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXXGPXXXGXGG 501
+ G GG GA P PPG G G A P G G GG
Sbjct: 167 GSDGQPGRPATGG--GAAP------RPGPPGPKGPRGAPGNSGRAGAPGQPGNDAHGYGG 218
Query: 500 XEGGPKXXPPPPXXGRXXXP 441
G P P G P
Sbjct: 219 GVGAPGPAGPRGAPGPAGHP 238
Score = 29.5 bits (63), Expect = 3.8
Identities = 25/78 (32%), Positives = 28/78 (35%), Gaps = 7/78 (8%)
Frame = -1
Query: 698 GGGGRRXKXXKXGPVXXGGPXG--AXP*KXIFWGAP-PPGXXGKXP--PXGGETXAPXP- 537
GGGG+ + GP GG G P WG P PG G P P P P
Sbjct: 95 GGGGQCSTCCRPGPPGAGGTPGKPGRPGAPGAWGMPGNPGKGGSGPCHPVVPTPCKPCPG 154
Query: 536 -NXXGPXXXGXGGXEGGP 486
P G G +G P
Sbjct: 155 GRPGPPGPPGRPGSDGQP 172
Score = 28.3 bits (60), Expect = 8.7
Identities = 41/163 (25%), Positives = 43/163 (26%), Gaps = 15/163 (9%)
Frame = -1
Query: 884 PPPXRGXRGXXGFXGX-GQKGXXXGXEAGGGVPXGXEXGXXXXARPGGRP----PXXXXG 720
PP G G G G G G GG P PGGRP P G
Sbjct: 108 PPGAGGTPGKPGRPGAPGAWGMPGNPGKGGSGPCHPVVPTPCKPCPGGRPGPPGPPGRPG 167
Query: 719 XFXXXXRG--GGGRRXKXXKXGPVXXGGPXG--------AXP*KXIFWGAPPPGXXGKXP 570
R GGG + GP G G P G G
Sbjct: 168 SDGQPGRPATGGGAAPRPGPPGPKGPRGAPGNSGRAGAPGQPGNDAHGYGGGVGAPGPAG 227
Query: 569 PXGGETXAPXPNXXGPXXXGXGGXEGGPKXXPPPPXXGRXXXP 441
P G A P G G G +G P P G P
Sbjct: 228 PRGAPGPAGHPGSSGGGRPGPAGPKGAPGQPGRPGPDGHPGQP 270
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 30.3 bits (65), Expect = 2.2
Identities = 28/111 (25%), Positives = 32/111 (28%), Gaps = 3/111 (2%)
Frame = -1
Query: 659 PVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXXGP-XXXGXGGXEG--G 489
P GP GA PPG G P GG P GP G G +G G
Sbjct: 147 PACPPGPPGAPGAPGKPGSEGPPGPPGHDGPNGGPGQPGQPGPHGPNGHPGKPGSQGPPG 206
Query: 488 PKXXPPPPXXGRXXXP*KXXXXXXXXXXXXXXXXNXGGXPXXXXPX*GXGK 336
P P G+ P + G P P G G+
Sbjct: 207 PPGHSDEPKPGQPGQPGRAGPRGPRGVAGIKGKDGAPGSPGQPGPRGGPGE 257
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 30.3 bits (65), Expect = 2.2
Identities = 24/80 (30%), Positives = 25/80 (31%), Gaps = 1/80 (1%)
Frame = -1
Query: 677 KXXKXGPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXXG-PXXXGXGG 501
K GP GP G K PPG G G + A P G P G G
Sbjct: 136 KPCPEGPPGPAGPPGPQGNKGPLGPPGPPGPEGPNGTAGNKGPAGPPGPGGKPGPAGPPG 195
Query: 500 XEGGPKXXPPPPXXGRXXXP 441
E G P P G P
Sbjct: 196 -ENGRNGEPQPGSPGEPGRP 214
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = +1
Query: 691 PPPRXXNXKXPXXLX-GGRPPGRAXXXSPXSXPXGTPPPASXPXXXPFWPXPXXPXXP 861
PPP + + P RPPG A P P G PP P P +P P P
Sbjct: 78 PPPGQHHPQHPGMPPMEWRPPG-AEYQMPPGYPAGYPPYGMPPRHHPGYPHPAYGYPP 134
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 30.3 bits (65), Expect = 2.2
Identities = 25/105 (23%), Positives = 32/105 (30%)
Frame = +1
Query: 538 GXGAXVSPPXGGXXPXXPGGGAPQKXXF*GLAPXGPPXXTGPXFXXFXLRPPPPRXXNXK 717
G G P G P P P G + P +GP +P P +
Sbjct: 941 GPGPGPPSPNGPSDPNKPSPNGPSPNGPNGPSDPNKPGPSGPNGPSDPNKPSPNGPSDPV 1000
Query: 718 XPXXLXGGRPPGRAXXXSPXSXPXGTPPPASXPXXXPFWPXPXXP 852
P G P G + + P P + P P WP P P
Sbjct: 1001 KPSP-SGPSPNGPSPNGPSPNGPSPNGPSPNGP--TPNWPSPNGP 1042
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 30.3 bits (65), Expect = 2.2
Identities = 24/80 (30%), Positives = 25/80 (31%), Gaps = 1/80 (1%)
Frame = -1
Query: 677 KXXKXGPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXXG-PXXXGXGG 501
K GP GP G K PPG G G + A P G P G G
Sbjct: 138 KPCPEGPPGPAGPPGPDGNKGPLGPPGPPGPEGPNGEPGNKGPAGPPGPGGKPGPAGPPG 197
Query: 500 XEGGPKXXPPPPXXGRXXXP 441
E G P P G P
Sbjct: 198 -ENGNNGEPQPGAPGEPGQP 216
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 30.3 bits (65), Expect = 2.2
Identities = 43/154 (27%), Positives = 47/154 (30%), Gaps = 10/154 (6%)
Frame = -1
Query: 884 PPPXRGXRGXXGFXGX-GQKGXXXGXEAGGGVPX---GXEXGXXXXARPGGRP-PXXXXG 720
PP G G G G GQ G G P G A P G P P G
Sbjct: 96 PPGQPGAPGEQGHPGLAGQPGSGARINPATGRPGFCITCPAGAPGPAGPPGAPGPKGNNG 155
Query: 719 XFXXXXRGGGGRRXKXXKXGPVXXGGPXGAXP*KXIFWGAPP-PGXXGKX----PPXGGE 555
+ GG R GP G G G+P PG G+ P G
Sbjct: 156 QPGAPAQSGG--RGPPGPRGPAGDAGSPGQPGHP----GSPGNPGRGGQRSRGLPGPSGR 209
Query: 554 TXAPXPNXXGPXXXGXGGXEGGPKXXPPPPXXGR 453
P P GP G G G P PP G+
Sbjct: 210 PGPPGP-AGGPGQPGHSGGAGSPGPQGPPGPSGQ 242
>Z73425-5|CAA97787.1| 427|Caenorhabditis elegans Hypothetical
protein F12F6.9 protein.
Length = 427
Score = 29.9 bits (64), Expect = 2.9
Identities = 36/141 (25%), Positives = 45/141 (31%), Gaps = 6/141 (4%)
Frame = -1
Query: 872 RGXRGXXGFXGXGQKGXXXGXEAGGGVPX----GXEXGXXXXARPGGRPPXXXX-GXFXX 708
+G RG G G + G + G+P E G P G P G
Sbjct: 122 QGERGPTGAPGDRGETGDKGDKGVAGIPGQDGLDGEQGEEGPVGPSGPPGRRGRKGADGK 181
Query: 707 XXRGGGGRRXKXXKXGPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXX 528
GG G G G G + +G PPG G+ P G + + P
Sbjct: 182 SAMGGFGSPGPKGVPGAKGGSGLQGPRGKRNYIYG--PPGPMGQPGPSGLDGVSGNPGER 239
Query: 527 GPXXXGXGGXEGGP-KXXPPP 468
GP G G G K P P
Sbjct: 240 GP--KGPPGDRGADIKFCPCP 258
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 29.9 bits (64), Expect = 2.9
Identities = 24/85 (28%), Positives = 26/85 (30%), Gaps = 1/85 (1%)
Frame = -3
Query: 747 GAPPXQXXGXFXIXXXGGXGAEXKXXKXGXGX-GGGXXXGKXLKXXFLGGPPXGGXXXTX 571
GAPP + GG GA G G GGG + GGP GG
Sbjct: 173 GAPPPPSGSA--MGGGGGGGATSAYFGVGSGAMGGGGAGAQSAYFGVGGGPVGGGGGGAK 230
Query: 570 PXXGGNXSPXPKXXXAXGXXXRGXG 496
GG P G G G
Sbjct: 231 SGGGGGGIPGQSVYMGAGGGGGGGG 255
>U00066-9|AAA50743.3| 780|Caenorhabditis elegans Mediator protein
15, isoform a protein.
Length = 780
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -1
Query: 581 GKXPPXGGETXAPXPNXXGPXXXGXGGXEGGPKXXPPPPXXG 456
G P GG T P PN P G GGP PPP G
Sbjct: 181 GSQAPGGGPT--PAPNV--PFPNGSSQMNGGPAMGQPPPQMG 218
>U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protein
15, isoform b protein.
Length = 777
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -1
Query: 581 GKXPPXGGETXAPXPNXXGPXXXGXGGXEGGPKXXPPPPXXG 456
G P GG T P PN P G GGP PPP G
Sbjct: 178 GSQAPGGGPT--PAPNV--PFPNGSSQMNGGPAMGQPPPQMG 215
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 29.9 bits (64), Expect = 2.9
Identities = 23/78 (29%), Positives = 23/78 (29%)
Frame = -1
Query: 698 GGGGRRXKXXKXGPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXXGPX 519
G G K G A P F PPG G P GG A P G
Sbjct: 142 GAPGEDGKAGNPGTAGSDAEAAAAPTASDFCFDCPPGPAG---PAGGPGPAGPPGPAGAD 198
Query: 518 XXGXGGXEGGPKXXPPPP 465
G GP P PP
Sbjct: 199 GNTPSGGGEGPAGPPGPP 216
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -1
Query: 605 GAP-PPGXXGKXPPXGGETXAPXPNXXGPXXXGXGGXEGGP 486
G P P G G P GGE A P GP G G +G P
Sbjct: 190 GPPGPAGADGNTPSGGGEGPAGPPGPPGP--AGNPGTDGAP 228
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = -1
Query: 602 APPPGXXGKXPPXGGETXAPXPNXXGPXXXGXGGXEGGPKXXPPPPXXGRXXXP 441
APPP G PP G PN P G G PPP GR P
Sbjct: 718 APPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGA-----PPPPFGRGAGP 766
Score = 29.5 bits (63), Expect = 3.8
Identities = 23/94 (24%), Positives = 26/94 (27%), Gaps = 2/94 (2%)
Frame = +2
Query: 497 PXPLSXXPXAXXXLGXGLXFPPXX-GXVXXXPPXG-GPPKKXXFRXLPXXXPPPXPXPFF 670
P P P PP G PP G GPP + P P F
Sbjct: 689 PRPAGLPPGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQ 748
Query: 671 XXFXSAPXPPXIXIXNXPLXCXGGAPRXGXXXXP 772
F + PP P+ PR G P
Sbjct: 749 QGFNAGAPPPPFGRGAGPMSSFPPPPRGGMHHMP 782
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 29.5 bits (63), Expect = 3.8
Identities = 36/125 (28%), Positives = 38/125 (30%), Gaps = 3/125 (2%)
Frame = -1
Query: 806 AGGGVPXGXEXGXXXXARPGGRPPXXXXGXFXXXXRGGGGRRXKXXKXGPVXXGGPXGAX 627
AG P G G PG P G GG GP G P GA
Sbjct: 177 AGNAGPPGAPGGP---GAPGNTPSGGAAGP-PGPPGPPGGPGNDGQPGGPGNPGAP-GAV 231
Query: 626 P*KXIFWGAP-PPGXXGKXPPXG--GETXAPXPNXXGPXXXGXGGXEGGPKXXPPPPXXG 456
G P PPG G P G G+ P GP G G +G P P G
Sbjct: 232 TEVPGQQGPPGPPGPAGPPGPAGNAGQAGYAQPGPAGP--PGDAGPDGAPGNPGQPGAPG 289
Query: 455 RXXXP 441
P
Sbjct: 290 DAGAP 294
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.5 bits (63), Expect = 3.8
Identities = 34/118 (28%), Positives = 34/118 (28%)
Frame = -1
Query: 842 GXGQKGXXXGXEAGGGVPXGXEXGXXXXARPGGRPPXXXXGXFXXXXRGGGGRRXKXXKX 663
G G G G GGG G G P PP G GGGG
Sbjct: 24 GGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGC------GGGGGGCGGGGG 77
Query: 662 GPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXXGPXXXGXGGXEGG 489
G GG G G G G GG P P G G GG GG
Sbjct: 78 GCGGGGGCGGGGG----GCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGG 131
>U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protein 8
protein.
Length = 282
Score = 29.5 bits (63), Expect = 3.8
Identities = 24/85 (28%), Positives = 26/85 (30%)
Frame = -1
Query: 740 PPXXXXGXFXXXXRGGGGRRXKXXKXGPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXG 561
PP G +G GR + GP G G A PPG G P G
Sbjct: 166 PPGPTGGQGGPGEQGDAGRPGAAGRPGPPGPRGEPGTEYRPGQAGRAGPPGPRGPPGPEG 225
Query: 560 GETXAPXPNXXGPXXXGXGGXEGGP 486
A GP G G G P
Sbjct: 226 NPGGAGEDGNQGP--VGHPGVPGRP 248
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 4/51 (7%)
Frame = -1
Query: 605 GAPPPGXXGKXPPXGGETXAP----XPNXXGPXXXGXGGXEGGPKXXPPPP 465
GAPPP G P G P P P G G P+ P PP
Sbjct: 112 GAPPPAHHGHFGPPGHHFQGPPQHFPPGPPRPHFPGPPGPHRPPEHYPGPP 162
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/71 (28%), Positives = 21/71 (29%)
Frame = -1
Query: 698 GGGGRRXKXXKXGPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXXGPX 519
G GR + GP GP G PPG G P G P P
Sbjct: 161 GNPGRNGEDGAPGPQGPSGPPGPPGQPGQPGQRGPPGEPGALLPGGDAPPGPSGPPGRPG 220
Query: 518 XXGXGGXEGGP 486
G G G P
Sbjct: 221 APGQPGKAGSP 231
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 29.1 bits (62), Expect = 5.0
Identities = 43/158 (27%), Positives = 45/158 (28%), Gaps = 10/158 (6%)
Frame = -1
Query: 884 PPPXRGXRGXXGFXGX-GQKGXXXGXEAGG-GVPXGXEXGXXXXARPGGRPPXXXXGXFX 711
PP G G G G G G AGG G P + AR G P G
Sbjct: 154 PPGFPGSDGQPGRDGEAGAPGQPGRDGAGGYGGPQQNDCQTCAPARQGAPGPPGPAGQPG 213
Query: 710 XXXRGG-GGRRXKXXKXGPVXXGGPXG--AXP*KXIFWGAPP-----PGXXGKXPPXGGE 555
G GP GGP G P GAP PG G P G
Sbjct: 214 QPGEPGHSDTSSTAGPPGPPGPGGPPGQDGHPGDAGAPGAPGQVVAGPGSVGPPGPQGPP 273
Query: 554 TXAPXPNXXGPXXXGXGGXEGGPKXXPPPPXXGRXXXP 441
A G G G +G P P G P
Sbjct: 274 GLAGPDGQPGHGGGGQPGPQGPPGDDGHPGEDGGAGGP 311
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/69 (27%), Positives = 20/69 (28%)
Frame = -1
Query: 662 GPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPNXXGPXXXGXGGXEGGPK 483
GP GP G PPG G P G + A P GP P
Sbjct: 166 GPAGPAGPDGEAGSPAAPSPPGPPGPSGPAGPAGNDGAAGTPGPDGPAGESTYPEPAAPG 225
Query: 482 XXPPPPXXG 456
PP G
Sbjct: 226 PAGPPGPAG 234
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = -1
Query: 881 PPXRGXRGXXGFXGXGQKGXXXGXEAGGGVPXGXEXGXXXXARPGGRPPXXXXGXFXXXX 702
P G G G G G G G GGG G G + GG G
Sbjct: 777 PTLGGPTGSSGGGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGN 836
Query: 701 RGGGG 687
GGG
Sbjct: 837 GNGGG 841
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 29.1 bits (62), Expect = 5.0
Identities = 28/85 (32%), Positives = 30/85 (35%), Gaps = 4/85 (4%)
Frame = -1
Query: 698 GGGGRRXKXXKXGPVXXGGPXG-AXP*KXIFWGAP-PPGXXGKXPPXGGETXAPXPNXXG 525
G G+ GP GP G A P GAP G GK P G P P G
Sbjct: 174 GDAGKDGPPGPPGPDGDSGPNGEAGPNGEP--GAPGKDGEKGKGEP--GPAGPPGPPGPG 229
Query: 524 --PXXXGXGGXEGGPKXXPPPPXXG 456
P G G +G P PP G
Sbjct: 230 GPPGDAGGAGSDGAPGPQGPPGQDG 254
>Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical
protein R07E5.1 protein.
Length = 812
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +2
Query: 80 KKKXKKXXXKKKKEKKKKXXXXKKIXXXKXRKK 178
K KK KK+KEKKKK KK K K+
Sbjct: 759 KNMKKKKKDKKEKEKKKKSKKSKKSKKEKKTKR 791
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.1 bits (62), Expect = 5.0
Identities = 26/85 (30%), Positives = 26/85 (30%), Gaps = 1/85 (1%)
Frame = -1
Query: 884 PPPXRGXR-GXXGFXGXGQKGXXXGXEAGGGVPXGXEXGXXXXARPGGRPPXXXXGXFXX 708
P P G R G G G G G G GG G G GG G
Sbjct: 32 PSPFFGGRSGGWGRPGWGGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGG 91
Query: 707 XXRGGGGRRXKXXKXGPVXXGGPXG 633
RGGGG G GG G
Sbjct: 92 GGRGGGGGGGGGRGGGGGGRGGGGG 116
Score = 29.1 bits (62), Expect = 5.0
Identities = 21/62 (33%), Positives = 21/62 (33%)
Frame = -1
Query: 869 GXRGXXGFXGXGQKGXXXGXEAGGGVPXGXEXGXXXXARPGGRPPXXXXGXFXXXXRGGG 690
G G G G G G GGG G G R GG G RGGG
Sbjct: 73 GNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGG-GGGGRGGG 131
Query: 689 GR 684
GR
Sbjct: 132 GR 133
>U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 326 protein.
Length = 560
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 74 ILKKKXKKXXXKKKKEKKKKXXXXKKIXXXKXRK 175
++KKK KK K+KKEK+K K K K
Sbjct: 268 VMKKKSKKEKKKEKKEKRKNKDKKKDKKKNKKSK 301
>DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein.
Length = 560
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 74 ILKKKXKKXXXKKKKEKKKKXXXXKKIXXXKXRK 175
++KKK KK K+KKEK+K K K K
Sbjct: 268 VMKKKSKKEKKKEKKEKRKNKDKKKDKKKNKKSK 301
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = -1
Query: 869 GXRGXXGFXGXGQKGXXXGXEAGGGVPXGXEXGXXXXARPGGRPP 735
G G G G +G G GGG P G A+P GRPP
Sbjct: 616 GGPGGPGGGGGPPRGPGGG---GGGGPTGPPAPPKPPAKPRGRPP 657
>AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen protein
69 protein.
Length = 394
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -1
Query: 596 PPGXXGKXPPXGGETXAPXPNXXG-PXXXGXGGXEGGP 486
PPG G+ P G P P G P G G +G P
Sbjct: 259 PPGLPGQCGPPGPPGYTPPPGPPGTPGVQGEAGQDGEP 296
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = -1
Query: 869 GXRGXXGFXGXGQKGXXXGXEAGGGVPXGXEXGXXXXARPGGRPP 735
G G G G +G G GGG P G A+P GRPP
Sbjct: 616 GGPGGPGGGGGPPRGPGGG---GGGGPTGPPAPPKPPAKPRGRPP 657
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/63 (26%), Positives = 20/63 (31%)
Frame = +1
Query: 682 LRPPPPRXXNXKXPXXLXGGRPPGRAXXXSPXSXPXGTPPPASXPXXXPFWPXPXXPXXP 861
+ PP P P G PP P P G PPP P + P P
Sbjct: 986 IHPPLPPPRFLAMPMQFSGHPPP--VIMGPPIIRPFGAPPPQFIPIQSNYGRPPQFPPIG 1043
Query: 862 LFP 870
+ P
Sbjct: 1044 VVP 1046
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 28.3 bits (60), Expect = 8.7
Identities = 33/130 (25%), Positives = 36/130 (27%), Gaps = 3/130 (2%)
Frame = -1
Query: 884 PPPXRGXRGXXGFXGXGQKGXXXGXEAGGGVPXGXEXGXXXXARPGG---RPPXXXXGXF 714
PP +G RG G G G P G PGG R P G
Sbjct: 212 PPGPKGPRGTPGPTGPKNFYITSG-------PPGPPGPPGPPGNPGGIGPRGPPGDPGIM 264
Query: 713 XXXXRGGGGRRXKXXKXGPVXXGGPXGAXP*KXIFWGAPPPGXXGKXPPXGGETXAPXPN 534
RG G GP+ GP G + PPG G G P
Sbjct: 265 TQDSRGVEGPSGPSGPPGPMGFPGPKGIDGFSQV-GSMGPPGNRGAPGRVGLNGPRGPPG 323
Query: 533 XXGPXXXGXG 504
GP G
Sbjct: 324 DIGPPGSAGG 333
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/63 (26%), Positives = 20/63 (31%)
Frame = +1
Query: 682 LRPPPPRXXNXKXPXXLXGGRPPGRAXXXSPXSXPXGTPPPASXPXXXPFWPXPXXPXXP 861
+ PP P P G PP P P G PPP P + P P
Sbjct: 986 IHPPLPPPRFLAMPMQFSGHPPP--VIMGPPIIRPFGAPPPQFIPIQSNYGRPPQFPPIG 1043
Query: 862 LFP 870
+ P
Sbjct: 1044 VVP 1046
>Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical
protein K07F5.11 protein.
Length = 290
Score = 28.3 bits (60), Expect = 8.7
Identities = 29/114 (25%), Positives = 31/114 (27%), Gaps = 3/114 (2%)
Frame = -3
Query: 657 GXGGGXXXGKXLKXXFLGGPPXGGXXXTXPXXGGNXSPXPKXXXAXGXXXRGXGRGPKXK 478
G GG G +GG P GG GG +P P G G G G
Sbjct: 7 GVAGGSNTGAQSAYFGVGGGPAGGGGGA-SKVGGAGAPPPGTSVYMGAGAGGGGGGGAQS 65
Query: 477 XPPPXXGA---GXXXXKKXPXPPPRTGEKXKEXXXGGXXXXXXXXXGXGXKPXG 325
GA G PPP G GG G P G
Sbjct: 66 AYFAVGGAPVGGAPAAVPMGAPPPAGGGASTMTALGGAPSGASTMTAVGGAPRG 119
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 8.7
Identities = 32/119 (26%), Positives = 34/119 (28%), Gaps = 2/119 (1%)
Frame = -1
Query: 836 GQKGXXXGXEAGGGVPXGXEXGXXXXARPGGRPPXXXXGXFXXXXRGGGGRRXKXXKXGP 657
G G EA P G G A P P G + GGGG
Sbjct: 558 GYSGSEAAPEAAPAAPSGGYSGSESSA-PAAPEPAPSSGGYS----GGGGDAGSAAGGSN 612
Query: 656 VXXGGPXGAXP*KXIFWGAPPPGXXGKXP--PXGGETXAPXPNXXGPXXXGXGGXEGGP 486
GG APPP GGE+ A P G G GG G P
Sbjct: 613 YSGGGETAP--------AAPPPAPEPAQTYSGAGGESAAAAPAPSGGGYSGSGGAGGAP 663
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 8.7
Identities = 32/119 (26%), Positives = 34/119 (28%), Gaps = 2/119 (1%)
Frame = -1
Query: 836 GQKGXXXGXEAGGGVPXGXEXGXXXXARPGGRPPXXXXGXFXXXXRGGGGRRXKXXKXGP 657
G G EA P G G A P P G + GGGG
Sbjct: 558 GYSGSEAAPEAAPAAPSGGYSGSESSA-PAAPEPAPSSGGYS----GGGGDAGSAAGGSN 612
Query: 656 VXXGGPXGAXP*KXIFWGAPPPGXXGKXP--PXGGETXAPXPNXXGPXXXGXGGXEGGP 486
GG APPP GGE+ A P G G GG G P
Sbjct: 613 YSGGGETAP--------AAPPPAPEPAQTYSGAGGESAAAAPAPSGGGYSGSGGAGGAP 663
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 28.3 bits (60), Expect = 8.7
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = -1
Query: 659 PVXXGGPXGAXP*KXIFWGAP-PPGXXGKXPPXGGETXAPXPNXXGPXXXGXGGXEGG 489
PV GP G K G P PPG G+ P G P GP G G +GG
Sbjct: 145 PVGPAGPAGGPGPK----GPPGPPGGHGEPGPAGRGGPRGPPGPGGP--QGEAGEDGG 196
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 8.7
Identities = 23/85 (27%), Positives = 27/85 (31%), Gaps = 2/85 (2%)
Frame = +1
Query: 556 SPPXGGXXPXXPGGGAPQKXXF*GLAPXGPPXXTGPXFXXFXLRPPPPRXX--NXKXPXX 729
+P G P P+K G +P PP P R PPPR P
Sbjct: 112 APQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPP--PRSPPPRRPPMTPPSPQR 169
Query: 730 LXGGRPPGRAXXXSPXSXPXGTPPP 804
PP P + P PPP
Sbjct: 170 RPPRTPPSPEPRNPPRTPPSPIPPP 194
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/61 (31%), Positives = 21/61 (34%)
Frame = +1
Query: 688 PPPPRXXNXKXPXXLXGGRPPGRAXXXSPXSXPXGTPPPASXPXXXPFWPXPXXPXXPLF 867
PPPPR G PP P + P +PPP P P P P P
Sbjct: 125 PPPPRKSRA------GGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPS-PQRRPPRTPPS 177
Query: 868 P 870
P
Sbjct: 178 P 178
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +2
Query: 77 LKKKXKKXXXKKKKEKKKKXXXXKKI 154
L KK KK K KKEKK++ KKI
Sbjct: 174 LLKKIKKDKKKAKKEKKREKKRAKKI 199
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -1
Query: 749 GGRPPXXXXGXFXXXXRGGGGRRXKXXKXGPVXXGGPXG 633
GGR G + GGGG + GP GGP G
Sbjct: 208 GGRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGG 246
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -1
Query: 749 GGRPPXXXXGXFXXXXRGGGGRRXKXXKXGPVXXGGPXG 633
GGR G + GGGG + GP GGP G
Sbjct: 170 GGRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGG 208
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -1
Query: 749 GGRPPXXXXGXFXXXXRGGGGRRXKXXKXGPVXXGGPXG 633
GGR G + GGGG + GP GGP G
Sbjct: 170 GGRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGG 208
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -1
Query: 749 GGRPPXXXXGXFXXXXRGGGGRRXKXXKXGPVXXGGPXG 633
GGR G + GGGG + GP GGP G
Sbjct: 208 GGRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGG 246
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -1
Query: 749 GGRPPXXXXGXFXXXXRGGGGRRXKXXKXGPVXXGGPXG 633
GGR G + GGGG + GP GGP G
Sbjct: 208 GGRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGG 246
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,577,950
Number of Sequences: 27780
Number of extensions: 371179
Number of successful extensions: 3413
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2600
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2521399358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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