Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_B13
         (853 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0684 - 18670697-18670933,18671003-18671102,18671214-186712...    29   4.7  
12_02_0944 - 24666114-24666200,24666287-24666352,24666450-246665...    28   8.2  

>04_03_0684 -
           18670697-18670933,18671003-18671102,18671214-18671266,
           18671664-18671810,18671901-18672031,18673064-18673088,
           18673201-18673305,18673941-18674054,18674900-18674992,
           18675101-18675193,18675951-18676057,18676442-18676490,
           18677140-18677253,18677728-18677787,18677887-18677955,
           18679154-18679255,18679338-18679366,18679450-18679732,
           18680399-18680752
          Length = 754

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = +2

Query: 617 LKKYSSDYYQITTDYL--VTKVXVGDWAPEVLQNKTQSALNXTKVPSFIILCMVPATGSH 790
           LK +S +   IT   L  +T+V VGD   ++        +   K PS IIL + PA    
Sbjct: 138 LKIFSPNVLDITLVDLPGITRVPVGDQPSDIESRIRSMIMQYIKHPSCIILAVTPANADL 197

Query: 791 ILRETLNL 814
              + L L
Sbjct: 198 ANSDALQL 205


>12_02_0944 -
           24666114-24666200,24666287-24666352,24666450-24666515,
           24666607-24666825,24666927-24667403
          Length = 304

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -3

Query: 371 EQRWTVFFLPSPVDYAQECPNL*TAFPLY 285
           +  WTVF LPS  D ++    L +AFP++
Sbjct: 9   DMSWTVFDLPSHSDESEMMAQLFSAFPIH 37


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,115,651
Number of Sequences: 37544
Number of extensions: 452429
Number of successful extensions: 1110
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)