Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_B11
         (894 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC094832-1|AAH94832.1|  321|Homo sapiens atonal homolog 8 (Droso...    31   5.6  
BC021207-1|AAH21207.1|  321|Homo sapiens atonal homolog 8 (Droso...    31   5.6  
AK074681-1|BAC11135.1|  321|Homo sapiens protein ( Homo sapiens ...    31   5.6  
AK027614-1|BAB55233.1|  321|Homo sapiens protein ( Homo sapiens ...    31   5.6  
AF529205-1|AAO85773.1|  321|Homo sapiens basic helix-loop-helix ...    31   5.6  

>BC094832-1|AAH94832.1|  321|Homo sapiens atonal homolog 8
           (Drosophila) protein.
          Length = 321

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 16/43 (37%), Positives = 16/43 (37%)
 Frame = -3

Query: 595 PNDRXQRVSERGXGRAPXTXTAXPRXLAXXFXXXKPPTPPPXP 467
           P        ERG  RAP    A  R  A        PTPPP P
Sbjct: 86  PRGGTDTAGERGGSRAPEVSDARKRCFALGAVGPGLPTPPPPP 128


>BC021207-1|AAH21207.1|  321|Homo sapiens atonal homolog 8
           (Drosophila) protein.
          Length = 321

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 16/43 (37%), Positives = 16/43 (37%)
 Frame = -3

Query: 595 PNDRXQRVSERGXGRAPXTXTAXPRXLAXXFXXXKPPTPPPXP 467
           P        ERG  RAP    A  R  A        PTPPP P
Sbjct: 86  PRGGTDTAGERGGSRAPEVSDARKRCFALGAVGPGLPTPPPPP 128


>AK074681-1|BAC11135.1|  321|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90200 fis, clone MAMMA1001615, weakly similar to
           NEUROGENIC DIFFERENTIATION FACTOR 1. ).
          Length = 321

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 16/43 (37%), Positives = 16/43 (37%)
 Frame = -3

Query: 595 PNDRXQRVSERGXGRAPXTXTAXPRXLAXXFXXXKPPTPPPXP 467
           P        ERG  RAP    A  R  A        PTPPP P
Sbjct: 86  PRGGTDTAGERGGSRAPEVSDARKRCFALGAVGPGLPTPPPPP 128


>AK027614-1|BAB55233.1|  321|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14708 fis, clone NT2RP3000603, weakly similar to
           NEUROGENIC DIFFERENTIATION FACTOR 1. ).
          Length = 321

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 16/43 (37%), Positives = 16/43 (37%)
 Frame = -3

Query: 595 PNDRXQRVSERGXGRAPXTXTAXPRXLAXXFXXXKPPTPPPXP 467
           P        ERG  RAP    A  R  A        PTPPP P
Sbjct: 86  PRGGTDTAGERGGSRAPEVSDARKRCFALGAVGPGLPTPPPPP 128


>AF529205-1|AAO85773.1|  321|Homo sapiens basic helix-loop-helix
           transcription factor protein.
          Length = 321

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 16/43 (37%), Positives = 16/43 (37%)
 Frame = -3

Query: 595 PNDRXQRVSERGXGRAPXTXTAXPRXLAXXFXXXKPPTPPPXP 467
           P        ERG  RAP    A  R  A        PTPPP P
Sbjct: 86  PRGGTDTAGERGGSRAPEVSDARKRCFALGAVGPGLPTPPPPP 128


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,257,578
Number of Sequences: 237096
Number of extensions: 1211085
Number of successful extensions: 2208
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2203
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)