Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_B10
         (886 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch...    69   7e-13
SPAC1296.03c |sxa2||serine carboxypeptidase Sxa2|Schizosaccharom...    55   2e-08
SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces pomb...    54   3e-08
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo...    29   0.67 
SPAC4F10.04 |||protein phosphatase type 2A, intrinsic regulator ...    28   1.5  
SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces pomb...    27   3.6  
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual        26   6.2  
SPCC417.05c |chr2|cfh2|chitin synthase regulatory factor |Schizo...    26   8.2  

>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
           Y|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1002

 Score = 69.3 bits (162), Expect = 7e-13
 Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
 Frame = +2

Query: 278 IKSYAGYFTVNKTYDSNQFFWYFPAMVPNSKNAPVIVWLQGGPGATSLYGLFTENGP--L 451
           +K Y GY  V    D + FFW+F +   + +N PV++WL GGPG +SL GLF E GP  +
Sbjct: 586 VKQYTGYLDVED--DRHLFFWFFESR-NDPENDPVVLWLNGGPGCSSLTGLFMELGPSSI 642

Query: 452 RVRNKKFERRKYNWALSHHIIYIDNP 529
            +   K E   ++W  +  +I++D P
Sbjct: 643 NIETLKPEYNPHSWNSNASVIFLDQP 668



 Score = 52.8 bits (121), Expect = 6e-08
 Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
 Frame = +3

Query: 576 VDETQVGEQLYSTLIQFFQLFPELQTNKFFVTGESYGGKYVPALAYTIHKKNPTAQI--- 746
           +D    G+ +Y+ L  FF  FP+     F + GESY G Y+P  A  I + N  A     
Sbjct: 681 LDTVTAGKDVYAFLNLFFAKFPQYAHLDFHIAGESYAGHYIPQFAKEIMEHNQGANFFVA 740

Query: 747 --------KINMKGIAIGNGLSDP 794
                    IN+K + IGNGL+DP
Sbjct: 741 SGYEMEKQYINLKSVLIGNGLTDP 764


>SPAC1296.03c |sxa2||serine carboxypeptidase
           Sxa2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 507

 Score = 54.8 bits (126), Expect = 2e-08
 Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
 Frame = +2

Query: 242 RLARVPFTESLRIKSYAGYFTVNKTYDSNQFFWYFPAMVPNSKNAPVIVWLQGGPGATSL 421
           R+  +P  +    + Y+GY   N   D + F+ Y PA+V +      IVWLQGGPG    
Sbjct: 60  RIKSLPEFKGSLPELYSGYLEANS--DKSLFYTYAPAVVDSET---FIVWLQGGPGCAGT 114

Query: 422 YGLFTENGPLRV--RNKKFERRKYNWALSHHIIYIDNP 529
            G F+ENGP+ +   +        +W    +++++D P
Sbjct: 115 LGFFSENGPIEISQSSPSPSLNPESWTNFANMLWLDQP 152



 Score = 37.1 bits (82), Expect = 0.003
 Identities = 20/73 (27%), Positives = 32/73 (43%)
 Frame = +3

Query: 570 YCVDETQVGEQLYSTLIQFFQLFPELQTNKFFVTGESYGGKYVPALAYTIHKKNPTAQIK 749
           Y     +      + L  F+Q FP L   K ++ GESYG  +    A  +  +     + 
Sbjct: 164 YTTTIEEASSDFVNALKSFYQKFPHLMKKKLYLVGESYGSIWSANFAEALLSE---PSLN 220

Query: 750 INMKGIAIGNGLS 788
           IN  G+ I +GL+
Sbjct: 221 INFMGVGIVSGLT 233


>SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 510

 Score = 54.0 bits (124), Expect = 3e-08
 Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
 Frame = +2

Query: 281 KSYAGYFTVNKTYDSNQFFWYFPAMVPNSKNAPVIVWLQGGPGATSLYGLFTENGPLRV- 457
           + +AG+       D + FFW F ++ P  ++  ++ WL GGPG +S  G   E GP R+ 
Sbjct: 44  RMHAGHLNQTDQLDGDLFFWMFESVKPEYEHRSIL-WLNGGPGCSSEDGSLMEVGPFRLD 102

Query: 458 RNKKFERRKYNWALSHHIIYIDNP 529
            N  F+     W    +++++D P
Sbjct: 103 DNNTFQLNPGRWDELGNLLFVDQP 126



 Score = 50.4 bits (115), Expect = 3e-07
 Identities = 22/58 (37%), Positives = 38/58 (65%)
 Frame = +3

Query: 621 QFFQLFPELQTNKFFVTGESYGGKYVPALAYTIHKKNPTAQIKINMKGIAIGNGLSDP 794
           +F + FPE   +++F+ GES+ G+Y+P +A  + +KN      +N+ G+AIGNG  +P
Sbjct: 156 KFLEEFPERANDEWFIAGESFAGQYIPHIAAKLKEKN-----LVNLGGLAIGNGWINP 208


>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
           Wis4|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1401

 Score = 29.5 bits (63), Expect = 0.67
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = +3

Query: 252 EYHLLKACALK--VMQATSR*IRLTTPTSSSGTFL 350
           E+H + +  LK  VMQ   R +RLT P   SGT++
Sbjct: 240 EWHSMLSSVLKGDVMQTEKRRLRLTEPDGHSGTYI 274


>SPAC4F10.04 |||protein phosphatase type 2A, intrinsic regulator
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 325

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
 Frame = -2

Query: 495 AQLYFRLSNFLLRTLKGPFSVKSP-YRDVAPGPPWSQTITGAFLLFGT-IAGKY 340
           + LYF    F+    KGPF   SP   D+   P WS+   G   ++   +  KY
Sbjct: 252 SNLYFSAIKFINVMKKGPFYEHSPILYDITAVPIWSKVNQGLIKMYDVEVLSKY 305


>SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1328

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = +2

Query: 311  KTYDSNQFFWYFPAMVPNSKNAPVIVWLQGGPGATSLYG 427
            K +   ++ +  PA +   K+  +I+WL   PG  + +G
Sbjct: 905  KAFHLGEYNYGRPAQITGCKDNKLIIWLSTAPGLDAQWG 943


>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 4717

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = +3

Query: 261  LLKACALKVMQATSR*IRLTTPTSSSGTFLLWFRTAKTHRLSSGSKEAPALHLCMDSSQK 440
            LL   A +++  T    RL   TS+S T+LL   +A  H +SS     P+L   ++   K
Sbjct: 2264 LLFVSAHEILDLTEEVNRLAVSTSNS-TYLLKSASAVYHNVSSFKGSTPSLWNLLNQFSK 2322

Query: 441  TVL 449
             ++
Sbjct: 2323 FLI 2325


>SPCC417.05c |chr2|cfh2|chitin synthase regulatory factor
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 512

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 726 SCELCRPELVHTFLHMILQSQK 661
           S E+C PE   +FL + LQ++K
Sbjct: 168 SAEMCEPETRLSFLQLALQAEK 189


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,602,531
Number of Sequences: 5004
Number of extensions: 74432
Number of successful extensions: 154
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 444486180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)