Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_B08
         (904 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    24   2.2  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   6.7  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   8.8  

>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -2

Query: 84  MRSNNSHKYTQHQNLKEFHY 25
           + +NN++KY  + N K+ +Y
Sbjct: 90  IHNNNNYKYNYNNNCKKLYY 109


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 10/39 (25%), Positives = 17/39 (43%)
 Frame = -2

Query: 306 TSTTAPSSCRPSVAFRWQGWTKANVCPTCFPERKELNGV 190
           T    PS C  +      G T + +CPT      +++G+
Sbjct: 357 TLERTPSKCSQTSVHYSNGQTHSQLCPTPRSTHLKVSGI 395


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 312 WGTSTTAPSSCRP 274
           WG     PS+CRP
Sbjct: 512 WGILVYEPSACRP 524


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,176
Number of Sequences: 438
Number of extensions: 4200
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29267238
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)