Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_B07
         (903 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0214 + 12713865-12713973,12715780-12716011,12716556-127166...    34   0.18 
12_01_0797 + 7300370-7300506,7300682-7300798,7301903-7302443,730...    29   5.1  
03_01_0185 - 1485023-1485733                                           29   6.7  

>04_03_0214 +
           12713865-12713973,12715780-12716011,12716556-12716635,
           12716930-12717083,12717213-12717291,12717654-12717738,
           12718420-12718466,12720123-12720281
          Length = 314

 Score = 33.9 bits (74), Expect = 0.18
 Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
 Frame = +1

Query: 394 RDGTISVLTHCT-TIIYP*GSVSLETLXEKLPTQQALQAVQDFLACGVENNLLTEDYHVV 570
           ++G + ++   + ++ YP G +  + + ++    + L   Q  LA  + +NLL+      
Sbjct: 162 KEGRVVIVASVSYSLSYP-GGICFDKINDESGYNRFLAYGQSKLANILHSNLLSSHLKEQ 220

Query: 571 GHQQLINTLSPGAVLQSEIESWAPL 645
             + ++N+L PGAV  + +  W PL
Sbjct: 221 DAKVIVNSLHPGAVATNILHHWCPL 245


>12_01_0797 +
           7300370-7300506,7300682-7300798,7301903-7302443,
           7302885-7304042,7304133-7304291,7304397-7304504,
           7305045-7305304,7305936-7306101,7307025-7307050,
           7307318-7307402,7307486-7307695,7308815-7308872,
           7308964-7309037,7309323-7309373,7309576-7309664,
           7310027-7310104,7310164-7310269
          Length = 1140

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = -2

Query: 722 RIKXKXDLFRGVNKILTPVLFEHYQANGAQLSISDCSTA 606
           RIK +  +    +K+ TP++FE +QA   + S+  C+TA
Sbjct: 407 RIKMRTPMLIQASKLYTPIIFEAFQAE-YERSMVACTTA 444


>03_01_0185 - 1485023-1485733
          Length = 236

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 291 LSVNSLRQHHMLLAGFKDLGYSFVAG 368
           LS+NS R HH++L  F D+     AG
Sbjct: 187 LSLNSSRHHHLILRAFADVCEELFAG 212


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,116,391
Number of Sequences: 37544
Number of extensions: 430806
Number of successful extensions: 1106
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)