Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_B07
         (903 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease pr...    27   1.0  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    25   4.2  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   9.6  

>AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease
           protein.
          Length = 364

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 12/45 (26%), Positives = 19/45 (42%)
 Frame = +3

Query: 174 ITEWSGTESRRKQPLKSPIDLVVIQHTVSNDCFTDEECLLSVNSL 308
           +T W  TE RR    +  ++L  ++H   N  +      LS   L
Sbjct: 251 VTGWGETEDRRPSDTQKHVELPGLEHEACNSVYAVANVTLSDKQL 295


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2

Query: 704 DLFRGVNKILTPV 666
           DLFRG NK++ PV
Sbjct: 33  DLFRGYNKLIRPV 45


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 267  CFTDEECLLSVNSLRQHHML 326
            C    ECL+ + +LR H+ +
Sbjct: 1664 CIFSSECLMKIFALRYHYFI 1683


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 797,662
Number of Sequences: 2352
Number of extensions: 15683
Number of successful extensions: 90
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 90
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97574436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)