Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_B07
         (903 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41528-5|AAM51514.2|  389|Caenorhabditis elegans Hypothetical pr...    32   0.49 
DQ139948-1|ABA29469.1|  381|Caenorhabditis elegans putative prot...    32   0.49 
Z81500-6|CAB04099.1|  221|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z71264-1|CAA95828.1|  998|Caenorhabditis elegans Hypothetical pr...    29   6.0  

>U41528-5|AAM51514.2|  389|Caenorhabditis elegans Hypothetical
           protein C15C7.7 protein.
          Length = 389

 Score = 32.3 bits (70), Expect = 0.49
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -2

Query: 527 QAKKSWTACSACWVGSFSXKVSNETDPYGYIIVVQCV 417
           +  K  T  S   V S+S   SNETDP GYI+   C+
Sbjct: 2   RVSKVLTLASFISVCSYSEAKSNETDPNGYIVFCPCM 38


>DQ139948-1|ABA29469.1|  381|Caenorhabditis elegans putative protein
           O-fucosyltransferase1 protein.
          Length = 381

 Score = 32.3 bits (70), Expect = 0.49
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -2

Query: 527 QAKKSWTACSACWVGSFSXKVSNETDPYGYIIVVQCV 417
           +  K  T  S   V S+S   SNETDP GYI+   C+
Sbjct: 2   RVSKVLTLASFISVCSYSEAKSNETDPNGYIVFCPCM 38


>Z81500-6|CAB04099.1|  221|Caenorhabditis elegans Hypothetical
           protein F11D11.8 protein.
          Length = 221

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 12/118 (10%)
 Frame = +3

Query: 90  WLHRLYYFLVFLVSFGTLNAASECGEIPITEWSGTESRRKQPLKSPIDLVVIQHTVSNDC 269
           +L   +YF VFL+ F + +         +TE   TE +    +K  ID          +C
Sbjct: 3   FLSSFFYFSVFLLPFTSCDVKMIKIFGKVTET--TEPQAFDAVKDCID----------EC 50

Query: 270 FTDEECLLS-VNSLRQHH-------MLLAGFKDLGYSFVAGGNGKIYE----GAGWNH 407
           F D ECLL+  NS   H+          A +KD+ YS V   +G IY      AGW++
Sbjct: 51  FEDSECLLAFFNSACFHYYTELPDATCPASYKDIKYS-VTSDSGDIYSWKKTDAGWSY 107


>Z71264-1|CAA95828.1|  998|Caenorhabditis elegans Hypothetical
           protein K07G5.1 protein.
          Length = 998

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = -2

Query: 743 IXGKXKXRIKXKXDLFRGVNKILTPVLFEHYQANGA--QLSISDCSTAPGLSVFINCW*P 570
           I G    ++K        +NK+L  V+ + Y   G   +L++SDC     LSV IN    
Sbjct: 518 IGGSNMNQLKKNNKQVHVINKVLLDVV-KLYSEEGCLEELNLSDCRLGAYLSVLINTLAA 576

Query: 569 TT 564
           TT
Sbjct: 577 TT 578


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,430,236
Number of Sequences: 27780
Number of extensions: 357729
Number of successful extensions: 880
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)