Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_B07
         (903 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    25   1.2  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   2.9  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    23   5.0  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   5.0  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   5.0  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   5.0  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   6.7  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              22   8.8  

>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2

Query: 704 DLFRGVNKILTPV 666
           DLFRG NK++ PV
Sbjct: 33  DLFRGYNKLIRPV 45


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = -2

Query: 599 LSVFINCW*PTTW*SSVNKLFSTPQAKKSWTACSACWVG 483
           +S FI CW P    + V      P A  ++ +    W+G
Sbjct: 378 MSAFIVCWLPFFVLALVRPFLKNPDAIPAFLSSLFLWLG 416


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = -2

Query: 398 SRSFINFSVASSHE*IAQVLE 336
           +RSF+ FS+  S + +A+V++
Sbjct: 295 ARSFVPFSIERSSQSVAEVMD 315


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 82  KDVGCTVSIIFWCSW 126
           ++ G T  II WC+W
Sbjct: 377 RNSGATDKIIRWCTW 391


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 82  KDVGCTVSIIFWCSW 126
           ++ G T  II WC+W
Sbjct: 377 RNSGATDKIIRWCTW 391


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 82  KDVGCTVSIIFWCSW 126
           ++ G T  II WC+W
Sbjct: 377 RNSGATDKIIRWCTW 391


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +2

Query: 62  QSLKQVAKMLVAPSLLFF 115
           QS K V KML A  +LFF
Sbjct: 263 QSRKSVIKMLSAVVILFF 280


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = -2

Query: 158 FGRCI-QGSETHQEHQKIIETVQP 90
           F  C+  G+ TH+E +  I+T+QP
Sbjct: 8   FAICVCVGAMTHEELKTGIQTLQP 31


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,123
Number of Sequences: 438
Number of extensions: 4532
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29267238
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)