Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_B06
         (897 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1339 + 32760424-32760584,32762428-32764462                       30   2.2  
04_04_1647 + 35032328-35033803                                         28   8.8  

>04_04_1339 + 32760424-32760584,32762428-32764462
          Length = 731

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +3

Query: 630 RKKVSK*TSSSCAERK*VLRRKICCGEDSKSELHPYTNSLETQETPGSSLYVNCLGLT 803
           ++ +S  T+S  AER  +++ K  CG    S+L    N L+T      S Y N  G T
Sbjct: 429 KRLLSGKTTSDEAERSMLVKLKTECGYQFTSKLEGMFNDLKTSHDTMQSFYANLSGDT 486


>04_04_1647 + 35032328-35033803
          Length = 491

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -3

Query: 784 TYNELPGVSCVSSELV*GCSSLFESSPQHIF 692
           T + L  V C SS     CSSL  +SP H+F
Sbjct: 108 TGSHLSWVPCTSSYQCRNCSSLSAASPLHVF 138


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,023,575
Number of Sequences: 37544
Number of extensions: 336459
Number of successful extensions: 768
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)