Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_B05
         (996 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0405 - 17767303-17767665,17767815-17768039,17768115-177683...    40   0.004
07_03_0952 + 22856077-22856185,22856639-22856817                       29   7.6  

>07_03_0405 -
           17767303-17767665,17767815-17768039,17768115-17768342,
           17768607-17768621,17768622-17768810,17769106-17769213,
           17769917-17770045
          Length = 418

 Score = 39.5 bits (88), Expect = 0.004
 Identities = 23/46 (50%), Positives = 27/46 (58%)
 Frame = +3

Query: 126 GLFYGVELLLRPCTALGAPALSRTRDGLLIXXVDLNQNRQIXDRRG 263
           G FYG      P  A   P+LSR RDGL+I  +DLN  RQI D+ G
Sbjct: 338 GHFYGSSHFSAP-DASCTPSLSRYRDGLMISDMDLNLCRQIKDKWG 382


>07_03_0952 + 22856077-22856185,22856639-22856817
          Length = 95

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +1

Query: 28  AYSGTPLRIELTEFPGTRFTSADAETWLHKRLWAC 132
           A SG+P R     F G R++  + + WL +  W+C
Sbjct: 26  ARSGSPARSGRAGFLGVRWSLVELQGWLLRWSWSC 60


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,984,747
Number of Sequences: 37544
Number of extensions: 206180
Number of successful extensions: 307
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 307
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2916970260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)