Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_B01
         (924 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0645 - 25814302-25814759,25814853-25815005,25815032-258152...    33   0.24 
11_06_0653 + 25911162-25911272,25911648-25911694,25912877-259133...    30   3.0  
11_06_0656 + 25926192-25926289,25927530-25927659,25928248-259282...    29   5.2  

>11_06_0645 -
           25814302-25814759,25814853-25815005,25815032-25815214,
           25815342-25815531,25815624-25815784,25816136-25816623,
           25817035-25817075
          Length = 557

 Score = 33.5 bits (73), Expect = 0.24
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -3

Query: 394 LLAGKIFLALLNSSGYIEKTTCVDDSSFLXETSYKARVQTA 272
           LL+GK++  L N  GY+      D+SSF+    +K  V  A
Sbjct: 112 LLSGKLYFRLQNGVGYLNSAKFQDNSSFVPSRKFKLGVMAA 152


>11_06_0653 +
           25911162-25911272,25911648-25911694,25912877-25913355,
           25914089-25914249,25914324-25914519,25914745-25914807,
           25914898-25915047,25915148-25915494
          Length = 517

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -3

Query: 406 GFQVLLAGKIFLALLNSSGYIEKTTCVDDSSFLXETSYKARVQTA 272
           G + LL+GK++  L    GY+      D+SSF+     K  V  A
Sbjct: 144 GKEHLLSGKLYFRLQGGVGYLNSAKFQDNSSFVPSKRLKLGVMAA 188


>11_06_0656 +
           25926192-25926289,25927530-25927659,25928248-25928294,
           25929274-25929388,25929504-25929753,25930079-25930239,
           25930372-25930567,25930672-25930836,25930918-25931070,
           25931160-25931248,25931385-25931423,25931460-25931681,
           25933503-25934165
          Length = 775

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -3

Query: 394 LLAGKIFLALLNSSGYIEKTTCVDDSSFLXETSYKARVQTA 272
           LL+GK++  L N  GY+      D+SSF+    +K  V  A
Sbjct: 150 LLSGKLYFRLQNGVGYL-NAKFQDNSSFVPSKKFKLGVMAA 189


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,986,937
Number of Sequences: 37544
Number of extensions: 305816
Number of successful extensions: 523
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)