Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_A09
(960 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018700-1|AAH18700.4| 121|Homo sapiens chromosome transmission... 80 1e-14
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 34 0.67
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 34 0.67
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 34 0.67
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 34 0.67
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 34 0.67
BC053992-1|AAH53992.1| 1312|Homo sapiens SR-related CTD-associat... 34 0.89
AK024444-1|BAB15734.1| 1343|Homo sapiens FLJ00034 protein protein. 34 0.89
AF254411-1|AAF87552.1| 1312|Homo sapiens ser/arg-rich pre-mRNA s... 34 0.89
BC011794-1|AAH11794.1| 462|Homo sapiens microspherule protein 1... 32 2.7
AY336730-1|AAQ84517.1| 475|Homo sapiens MCRS2 protein. 32 2.7
AF068007-1|AAC68599.1| 534|Homo sapiens cell cycle-regulated fa... 32 2.7
AF015308-1|AAC52086.1| 462|Homo sapiens nucleolar protein protein. 32 2.7
>BC018700-1|AAH18700.4| 121|Homo sapiens chromosome transmission
fidelity factor 8 homolog (S. cerevisiae) protein.
Length = 121
Score = 79.8 bits (188), Expect = 1e-14
Identities = 45/123 (36%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Frame = +2
Query: 224 IMQIYIDCKNVEGGVPEWAIIELQGLVQMKNENPTCATVVGDLHYYNRNRHPVLVLGHHV 403
++QI I GG+ EW ++ELQG ++ + ++GDLHY PVL++GHH+
Sbjct: 1 MVQIVISSARA-GGLAEWVLMELQGEIEARYSTGLAGNLLGDLHYTTEGI-PVLIVGHHI 58
Query: 404 LNGKEVKLEQPMAVIQKTNLGDE----------IKYEXXXXXXXXLLFKSRPKPIICNVS 553
L GK + LE+P AV+ K GD+ +Y +LFK+RPKPII +V
Sbjct: 59 LYGKIIHLEKPFAVLVKHTPGDQDCDELGRETGTRYLVTALIKDKILFKTRPKPIITSVP 118
Query: 554 ENV 562
+ V
Sbjct: 119 KKV 121
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 34.3 bits (75), Expect = 0.67
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +1
Query: 259 RRRSGVGYNRTAGTRADEKRESNVRHRRGRPPLL*QKPTSRVSARS--SRPERQGSKARA 432
RRR G GY+ + R + R S+ R RRGR PTSR +RS S + S++RA
Sbjct: 1813 RRRGGSGYHSRSPARQESSRTSS-RRRRGRSR---TPPTSRKRSRSRTSPAPWKRSRSRA 1868
Query: 433 THGRHTKN 456
+ H ++
Sbjct: 1869 SPATHRRS 1876
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 34.3 bits (75), Expect = 0.67
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +1
Query: 259 RRRSGVGYNRTAGTRADEKRESNVRHRRGRPPLL*QKPTSRVSARS--SRPERQGSKARA 432
RRR G GY+ + R + R S+ R RRGR PTSR +RS S + S++RA
Sbjct: 845 RRRGGSGYHSRSPARQESSRTSS-RRRRGRSR---TPPTSRKRSRSRTSPAPWKRSRSRA 900
Query: 433 THGRHTKN 456
+ H ++
Sbjct: 901 SPATHRRS 908
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 34.3 bits (75), Expect = 0.67
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +1
Query: 259 RRRSGVGYNRTAGTRADEKRESNVRHRRGRPPLL*QKPTSRVSARS--SRPERQGSKARA 432
RRR G GY+ + R + R S+ R RRGR PTSR +RS S + S++RA
Sbjct: 1813 RRRGGSGYHSRSPARQESSRTSS-RRRRGRSR---TPPTSRKRSRSRTSPAPWKRSRSRA 1868
Query: 433 THGRHTKN 456
+ H ++
Sbjct: 1869 SPATHRRS 1876
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 34.3 bits (75), Expect = 0.67
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +1
Query: 259 RRRSGVGYNRTAGTRADEKRESNVRHRRGRPPLL*QKPTSRVSARS--SRPERQGSKARA 432
RRR G GY+ + R + R S+ R RRGR PTSR +RS S + S++RA
Sbjct: 336 RRRGGSGYHSRSPARQESSRTSS-RRRRGRSR---TPPTSRKRSRSRTSPAPWKRSRSRA 391
Query: 433 THGRHTKN 456
+ H ++
Sbjct: 392 SPATHRRS 399
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 34.3 bits (75), Expect = 0.67
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +1
Query: 259 RRRSGVGYNRTAGTRADEKRESNVRHRRGRPPLL*QKPTSRVSARS--SRPERQGSKARA 432
RRR G GY+ + R + R S+ R RRGR PTSR +RS S + S++RA
Sbjct: 1861 RRRGGSGYHSRSPARQESSRTSS-RRRRGRSR---TPPTSRKRSRSRTSPAPWKRSRSRA 1916
Query: 433 THGRHTKN 456
+ H ++
Sbjct: 1917 SPATHRRS 1924
>BC053992-1|AAH53992.1| 1312|Homo sapiens SR-related CTD-associated
factor 1 protein.
Length = 1312
Score = 33.9 bits (74), Expect = 0.89
Identities = 25/70 (35%), Positives = 29/70 (41%)
Frame = +1
Query: 259 RRRSGVGYNRTAGTRADEKRESNVRHRRGRPPLL*QKPTSRVSARSSRPERQGSKARATH 438
RRRS R G+R RE R RR P P + S+ SSR ER K R
Sbjct: 584 RRRSRSTDRRRGGSRRSRSREKRRRRRRSASP-----PPATSSSSSSRRERHRGKHRDGG 638
Query: 439 GRHTKNELGR 468
G K + R
Sbjct: 639 GSKKKKKRSR 648
>AK024444-1|BAB15734.1| 1343|Homo sapiens FLJ00034 protein protein.
Length = 1343
Score = 33.9 bits (74), Expect = 0.89
Identities = 25/70 (35%), Positives = 29/70 (41%)
Frame = +1
Query: 259 RRRSGVGYNRTAGTRADEKRESNVRHRRGRPPLL*QKPTSRVSARSSRPERQGSKARATH 438
RRRS R G+R RE R RR P P + S+ SSR ER K R
Sbjct: 615 RRRSRSTDRRRGGSRRSRSREKRRRRRRSASP-----PPATSSSSSSRRERHRGKHRDGG 669
Query: 439 GRHTKNELGR 468
G K + R
Sbjct: 670 GSKKKKKRSR 679
>AF254411-1|AAF87552.1| 1312|Homo sapiens ser/arg-rich pre-mRNA
splicing factor SR-A1 protein.
Length = 1312
Score = 33.9 bits (74), Expect = 0.89
Identities = 25/70 (35%), Positives = 29/70 (41%)
Frame = +1
Query: 259 RRRSGVGYNRTAGTRADEKRESNVRHRRGRPPLL*QKPTSRVSARSSRPERQGSKARATH 438
RRRS R G+R RE R RR P P + S+ SSR ER K R
Sbjct: 584 RRRSRSTDRRRGGSRRSRSREKRRRRRRSASP-----PPATSSSSSSRRERHRGKHRDGG 638
Query: 439 GRHTKNELGR 468
G K + R
Sbjct: 639 GSKKKKKRSR 648
>BC011794-1|AAH11794.1| 462|Homo sapiens microspherule protein 1
protein.
Length = 462
Score = 32.3 bits (70), Expect = 2.7
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = +2
Query: 230 QIYIDCKNVEGGVPEWAIIELQGLVQMKNENPTCATVVGDLHYYNRNRHPVLVLGHHVLN 409
QI +D ++EG P W I QG++++KN GD N R P+ + G VL
Sbjct: 373 QIDVDL-SLEG--PAWKISRKQGVIKLKNN--------GDFFIANEGRRPIYIDGRPVLC 421
Query: 410 GKEVKLEQPMAV 445
G + +L V
Sbjct: 422 GSKWRLSNNSVV 433
>AY336730-1|AAQ84517.1| 475|Homo sapiens MCRS2 protein.
Length = 475
Score = 32.3 bits (70), Expect = 2.7
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = +2
Query: 230 QIYIDCKNVEGGVPEWAIIELQGLVQMKNENPTCATVVGDLHYYNRNRHPVLVLGHHVLN 409
QI +D ++EG P W I QG++++KN GD N R P+ + G VL
Sbjct: 386 QIDVDL-SLEG--PAWKISRKQGVIKLKNN--------GDFFIANEGRRPIYIDGRPVLC 434
Query: 410 GKEVKLEQPMAV 445
G + +L V
Sbjct: 435 GSKWRLSNNSVV 446
>AF068007-1|AAC68599.1| 534|Homo sapiens cell cycle-regulated
factor p78 protein.
Length = 534
Score = 32.3 bits (70), Expect = 2.7
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = +2
Query: 230 QIYIDCKNVEGGVPEWAIIELQGLVQMKNENPTCATVVGDLHYYNRNRHPVLVLGHHVLN 409
QI +D ++EG P W I QG++++KN GD N R P+ + G VL
Sbjct: 445 QIDVDL-SLEG--PAWKISRKQGVIKLKNN--------GDFFIANEGRRPIYIDGRPVLC 493
Query: 410 GKEVKLEQPMAV 445
G + +L V
Sbjct: 494 GSKWRLSNNSVV 505
>AF015308-1|AAC52086.1| 462|Homo sapiens nucleolar protein protein.
Length = 462
Score = 32.3 bits (70), Expect = 2.7
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = +2
Query: 230 QIYIDCKNVEGGVPEWAIIELQGLVQMKNENPTCATVVGDLHYYNRNRHPVLVLGHHVLN 409
QI +D ++EG P W I QG++++KN GD N R P+ + G VL
Sbjct: 373 QIDVDL-SLEG--PAWKISRKQGVIKLKNN--------GDFFIANEGRRPIYIDGRPVLC 421
Query: 410 GKEVKLEQPMAV 445
G + +L V
Sbjct: 422 GSKWRLSNNSVV 433
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,256,991
Number of Sequences: 237096
Number of extensions: 2056789
Number of successful extensions: 7010
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7000
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12714176638
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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