Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_A05
         (1115 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127997-1|BAC87222.1|  148|Homo sapiens protein ( Homo sapiens ...    31   7.6  

>AK127997-1|BAC87222.1|  148|Homo sapiens protein ( Homo sapiens cDNA
            FLJ46115 fis, clone TESTI2037085. ).
          Length = 148

 Score = 31.1 bits (67), Expect = 7.6
 Identities = 23/97 (23%), Positives = 34/97 (35%)
 Frame = +2

Query: 785  KXKXXXKXXXKKXXKKXXKKXXXXKXXXGKRRXXKXRGKRXRKKXXXMGXKXXXEKKGXX 964
            K K   K   KK  KK  KK    K    K++  K + K+ +KK      K   +KK   
Sbjct: 4    KKKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 63

Query: 965  XXGXXXKXXXXXEXXXRXXEXXRKKXXXEXXGGXRKR 1075
                  K     +   +  +  +KK         R+R
Sbjct: 64   KKNKKKKKKKKKKKKKKKRKKKKKKKKKRRKRRRRRR 100


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.302    0.132    0.356 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,867,374
Number of Sequences: 237096
Number of extensions: 60453
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 15479331280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.7 bits)