Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_A01
         (895 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0062 - 476027-476044,476791-477195,477287-477574,477653-47...    30   2.9  
03_05_0605 - 26066394-26066776,26067466-26067497,26069075-260693...    29   6.6  
02_05_1074 - 33904518-33904697,33904886-33904985,33905085-339053...    29   6.6  
12_01_0062 + 530180-532398,533123-533213,533398-533613                 28   8.7  
11_01_0060 + 453615-454030,454086-455862                               28   8.7  

>11_01_0062 -
           476027-476044,476791-477195,477287-477574,477653-477830,
           478005-478133,478531-478729,478832-478970,479130-479195,
           480459-480580,480672-480742,480819-480903,481335-481453,
           481577-481687,481945-482117,482375-482446,482768-482862,
           483361-483450,483550-483646
          Length = 818

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +2

Query: 578 QHFAEGKRTKSLVDVLHEILHRR*NGLRIRKPTRAWXGQYNK 703
           QH      ++++ DVLH +LH   +   I+  T+ W  + N+
Sbjct: 75  QHIETVHHSEAVQDVLHSLLHSDLDAKEIKSKTKEWNNRTNQ 116


>03_05_0605 -
           26066394-26066776,26067466-26067497,26069075-26069300,
           26069422-26069613,26070069-26070828,26071044-26071583
          Length = 710

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
 Frame = +1

Query: 271 ECLNYVQQRQADXFPVDPEDMYVAAKIPNQDFVVFQEYRTDEEPDA----PFRYEAVIVI 438
           E LN   QR A+    + ++ Y+  ++P+  +   +E+R  +EP +    P   + V  I
Sbjct: 209 ELLNQCIQRVANS---NLDNRYLEKRLPDDLYAKLKEFRVPDEPHSGILDPEHEKRVRNI 265

Query: 439 HKDLPIDNLD 468
           HK L  D++D
Sbjct: 266 HKALDSDDVD 275


>02_05_1074 -
           33904518-33904697,33904886-33904985,33905085-33905311,
           33905511-33908384,33908467-33908643,33908786-33909008,
           33909727-33909806,33910657-33910817,33910892-33910937,
           33911129-33911251,33911730-33911804,33911920-33912120
          Length = 1488

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
 Frame = +1

Query: 157 ITYKIC-VPSQHLKACQDMVDIPXKSKVT-LDCIPARDRMECLNYVQQRQADXFPV 318
           I+Y +  +PS  L   Q++ D   +  V  +  +  ++R+ C NY+Q+ ++  FPV
Sbjct: 286 ISYALSFIPSVFLPNSQEIQDTGIRDMVLHMIQLDPKERLSCKNYLQKYESVVFPV 341


>12_01_0062 + 530180-532398,533123-533213,533398-533613
          Length = 841

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +1

Query: 112 FILITLICACVNAAKITYKICVPSQHLK 195
           FIL T++ AC NAA I +  C+ S  LK
Sbjct: 500 FILATVLNACANAALIRHCRCIHSLVLK 527


>11_01_0060 + 453615-454030,454086-455862
          Length = 730

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +1

Query: 112 FILITLICACVNAAKITYKICVPSQHLK 195
           FIL T++ AC NAA I +  C+ S  LK
Sbjct: 484 FILATVLNACANAALIRHCRCIHSLVLK 511


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,814,911
Number of Sequences: 37544
Number of extensions: 474616
Number of successful extensions: 980
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)