Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_P24
         (899 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.            31   5.7  
AF043724-1|AAC39862.1|  359|Homo sapiens hepatitis A virus cellu...    30   10.0 

>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
          Length = 3570

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +3

Query: 144 LWPTLKETATNLLTTARTSLILPKTTTXMETATNLSTTVHITWTVPKADLT 296
           L  +L  T T+ L+T++     P+T T M   TN +T+   T   PK + T
Sbjct: 417 LTTSLAPTLTSELSTSQAETSTPRTETTMSPLTNTTTSQGTTRCQPKCEWT 467


>AF043724-1|AAC39862.1|  359|Homo sapiens hepatitis A virus cellular
           receptor 1 protein.
          Length = 359

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +3

Query: 165 TATNLLTTARTSLILPKTTTXMETATNLSTTVHITWTVP 281
           T    +TT RTS  +P TTT   T    + ++  T TVP
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPTTTVPTTMSIPTTTTVP 174


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,462,026
Number of Sequences: 237096
Number of extensions: 1437022
Number of successful extensions: 6131
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6127
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)