Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_P24
         (899 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3800|AAN14054.2|  881|Drosophila melanogaster CG31439-P...    31   2.2  
AE014298-962|AAF46206.1|  230|Drosophila melanogaster CG4547-PA ...    29   6.6  
AE014296-1693|AAF50239.2| 1937|Drosophila melanogaster CG3280-PA...    29   8.7  

>AE014297-3800|AAN14054.2|  881|Drosophila melanogaster CG31439-PA
           protein.
          Length = 881

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 16/43 (37%), Positives = 18/43 (41%)
 Frame = +3

Query: 153 TLKETATNLLTTARTSLILPKTTTXMETATNLSTTVHITWTVP 281
           T   T T   TT  T+   P TTT   T T  +TT     T P
Sbjct: 525 TTTTTTTTTTTTTTTTTCTPTTTTTTTTTTTTTTTTTTATTTP 567


>AE014298-962|AAF46206.1|  230|Drosophila melanogaster CG4547-PA
           protein.
          Length = 230

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 146 MANAQGNGYEPIDNRPYIVNPPKDYNXNGNGY 241
           M  + G GY+PI  +P  + PP   + + NG+
Sbjct: 5   MELSYGRGYDPIGRQPPSLPPPSQQHWSSNGF 36


>AE014296-1693|AAF50239.2| 1937|Drosophila melanogaster CG3280-PA
           protein.
          Length = 1937

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +3

Query: 144 LWPTLKETATNLLTTARTSLILPKTTTXMETAT--NLSTTVHITWT 275
           +W T +ET+    TT+  + + P TTT   T T    +TT   T T
Sbjct: 697 IWSTTEETSPTTTTTSPWTTLPPSTTTTEATTTTERATTTTEATST 742


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,827,963
Number of Sequences: 53049
Number of extensions: 423227
Number of successful extensions: 1231
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4382549442
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)