Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_P23
(881 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 188 7e-48
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 173 1e-43
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 149 2e-36
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 149 3e-36
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 144 6e-35
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 141 8e-34
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 100 2e-21
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 89 6e-18
03_05_0469 + 24640925-24641081,24641292-24641644,24641870-246420... 31 1.6
08_02_0839 + 21693348-21694853 29 6.5
03_02_0834 - 11630288-11630500,11630531-11630623,11630844-116310... 29 6.5
07_03_0941 - 22763733-22763970,22764077-22764213,22764282-227644... 28 8.6
07_01_0751 - 5777017-5778032,5779718-5780111,5780830-5781936 28 8.6
07_01_0070 + 515247-515397,516198-516265,516360-518456,518750-51... 28 8.6
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 28 8.6
01_05_0297 - 20578031-20578080,20578162-20578236,20578317-205784... 28 8.6
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 188 bits (457), Expect = 7e-48
Identities = 114/231 (49%), Positives = 132/231 (57%), Gaps = 1/231 (0%)
Frame = +2
Query: 152 LSSTMSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSFAYKNVI 331
+S + RE+NVY AKLAEQAERY+EMVE M+ VA + ELTVEERNLLS AYKNVI
Sbjct: 1 MSPAEASREENVYMAKLAEQAERYEEMVEFMEKVA-KTTDVGELTVEERNLLSVAYKNVI 59
Query: 332 GARRASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLXQVPHPQLT 511
GARRASWRIISSIEQKEE++G E + I+ YRS++E EL IC IL +L P T
Sbjct: 60 GARRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSAT 119
Query: 512 DRRIKSFLLQNEGRLPPVPGRVRD-RQRPQGGCRELAGRVQGXXXXXXXXXXXXXXXXXX 688
K F L+ +G + +R + L
Sbjct: 120 AAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSA--QDIALADLPTTHPIRL 177
Query: 689 XXXXXXXXXXXXXLNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTXIMQ 841
LNSPDRAC LAK AFDDAIAELDTL EESYKDST IMQ
Sbjct: 178 GLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQ 228
Score = 81.8 bits (193), Expect = 7e-16
Identities = 36/49 (73%), Positives = 43/49 (87%)
Frame = +3
Query: 492 YLIPSSQTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAA 638
+L+PS+ ESKVFY KMKGDYHRYLAEF +G +RKEAAEN+LVAYK+A
Sbjct: 113 HLVPSATAAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSA 161
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +1
Query: 646 IAMTELXPTHPIRLGLALNFSVFYYEI 726
IA+ +L THPIRLGLALNFSVFYYEI
Sbjct: 164 IALADLPTTHPIRLGLALNFSVFYYEI 190
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 173 bits (422), Expect = 1e-43
Identities = 106/225 (47%), Positives = 126/225 (56%), Gaps = 2/225 (0%)
Frame = +2
Query: 173 REDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDN--ELTVEERNLLSFAYKNVIGARRA 346
RE+ VY AKLAEQAERY+EMVE M+ V + + ELTVEERNLLS AYKNVIGARRA
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69
Query: 347 SWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLXQVPHPQLTDRRIK 526
SWRI+SSIEQKEE +GA R+YR++VE EL +IC+ IL +L + P K
Sbjct: 70 SWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAK 129
Query: 527 SFLLQNEGRLPPVPGRVRDRQRPQGGCRELAGRVQGXXXXXXXXXXXXXXXXXXXXXXXX 706
F L+ +G + + Q
Sbjct: 130 VFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQA-AQDIAMKELSPTHPIRLGLALNF 188
Query: 707 XXXXXXXLNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTXIMQ 841
LNSPDRAC LAK AFD+AI+ELDTL EESYKDST IMQ
Sbjct: 189 SVFYYEILNSPDRACTLAKQAFDEAISELDTLGEESYKDSTLIMQ 233
Score = 70.1 bits (164), Expect = 2e-12
Identities = 30/48 (62%), Positives = 40/48 (83%)
Frame = +3
Query: 495 LIPSSQTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAA 638
L+P++ ++KVFY KMKGDYHRYLAEF TG +RK+AA+ +L AY+AA
Sbjct: 119 LVPAAAAVDAKVFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAA 166
Score = 55.2 bits (127), Expect = 7e-08
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = +1
Query: 646 IAMTELXPTHPIRLGLALNFSVFYYEI 726
IAM EL PTHPIRLGLALNFSVFYYEI
Sbjct: 169 IAMKELSPTHPIRLGLALNFSVFYYEI 195
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 149 bits (362), Expect = 2e-36
Identities = 78/126 (61%), Positives = 93/126 (73%)
Frame = +2
Query: 173 REDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSFAYKNVIGARRASW 352
RE+NVY AKLAEQAERY+EMVE M+ VA + V ELTVEERNLLS AYKNVIGARRASW
Sbjct: 9 REENVYMAKLAEQAERYEEMVEFMEKVA-KTVDSEELTVEERNLLSVAYKNVIGARRASW 67
Query: 353 RIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLXQVPHPQLTDRRIKSF 532
RIISSIEQKEE++G ED++ +I+ YR ++E EL IC IL +L P T K F
Sbjct: 68 RIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTAPESKVF 127
Query: 533 LLQNEG 550
L+ +G
Sbjct: 128 YLKMKG 133
Score = 80.6 bits (190), Expect = 2e-15
Identities = 36/49 (73%), Positives = 43/49 (87%)
Frame = +3
Query: 492 YLIPSSQTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAA 638
+L+PSS ESKVFY KMKGDY+RYLAEF TG +RK+AAEN++VAYKAA
Sbjct: 114 HLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAA 162
Score = 70.9 bits (166), Expect = 1e-12
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 728 LNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTXIMQ 841
LNSPDRAC LAK AFD+AI+ELDTLSEESYKDST IMQ
Sbjct: 192 LNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQ 229
Score = 54.4 bits (125), Expect = 1e-07
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = +1
Query: 646 IAMTELXPTHPIRLGLALNFSVFYYEI 726
IA+ EL PTHPIRLGLALNFSVFYYEI
Sbjct: 165 IALAELPPTHPIRLGLALNFSVFYYEI 191
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 149 bits (361), Expect = 3e-36
Identities = 78/126 (61%), Positives = 92/126 (73%)
Frame = +2
Query: 173 REDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSFAYKNVIGARRASW 352
RE+NVY AKLAEQAERY+EMVE M+ VA + V ELTVEERNLLS AYKNVIGARRASW
Sbjct: 227 REENVYMAKLAEQAERYEEMVEFMEKVA-KTVDSEELTVEERNLLSVAYKNVIGARRASW 285
Query: 353 RIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLXQVPHPQLTDRRIKSF 532
RIISSIEQKEE++G ED+ +I+ YR ++E EL IC IL +L P T K F
Sbjct: 286 RIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTAPESKVF 345
Query: 533 LLQNEG 550
L+ +G
Sbjct: 346 YLKMKG 351
Score = 80.6 bits (190), Expect = 2e-15
Identities = 36/49 (73%), Positives = 43/49 (87%)
Frame = +3
Query: 492 YLIPSSQTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAA 638
+L+PSS ESKVFY KMKGDY+RYLAEF TG +RK+AAEN++VAYKAA
Sbjct: 332 HLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAA 380
Score = 70.9 bits (166), Expect = 1e-12
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +2
Query: 728 LNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTXIMQ 841
LNSPDRAC LAK AFD+AI+ELDTLSEESYKDST IMQ
Sbjct: 410 LNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQ 447
Score = 54.4 bits (125), Expect = 1e-07
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = +1
Query: 646 IAMTELXPTHPIRLGLALNFSVFYYEI 726
IA+ EL PTHPIRLGLALNFSVFYYEI
Sbjct: 383 IALAELPPTHPIRLGLALNFSVFYYEI 409
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 144 bits (350), Expect = 6e-35
Identities = 76/126 (60%), Positives = 91/126 (72%)
Frame = +2
Query: 173 REDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSFAYKNVIGARRASW 352
RE+NVY AKLAEQAERY+EMVE M+ VA + V ELTVEERNLLS AYKNVIGARRASW
Sbjct: 3 REENVYMAKLAEQAERYEEMVEYMEKVA-KTVDVEELTVEERNLLSVAYKNVIGARRASW 61
Query: 353 RIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLXQVPHPQLTDRRIKSF 532
RI+SSIEQKEE +G E+ + +I+ YR ++E EL IC IL +L P T K F
Sbjct: 62 RIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKVF 121
Query: 533 LLQNEG 550
L+ +G
Sbjct: 122 YLKMKG 127
Score = 83.0 bits (196), Expect = 3e-16
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = +3
Query: 492 YLIPSSQTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAA 638
+L+PSS ESKVFY KMKGDYHRYLAEF TG +RKEAAE+++VAYKAA
Sbjct: 108 HLVPSSTAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAA 156
Score = 68.1 bits (159), Expect = 9e-12
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = +2
Query: 728 LNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTXIMQ 841
LNSPD+AC LAK AFD+AI+ELDTL EESYKDST IMQ
Sbjct: 186 LNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLIMQ 223
Score = 53.2 bits (122), Expect = 3e-07
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +1
Query: 646 IAMTELXPTHPIRLGLALNFSVFYYEI 726
IA+ +L PTHPIRLGLALNFSVFYYEI
Sbjct: 159 IALADLAPTHPIRLGLALNFSVFYYEI 185
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 141 bits (341), Expect = 8e-34
Identities = 90/206 (43%), Positives = 105/206 (50%), Gaps = 1/206 (0%)
Frame = +2
Query: 227 EMVEAMKNVASRNVSDNELTVEERNLLSFAYKNVIGARRASWRIISSIEQKEETKGAEDK 406
E +E + A ELTVEERNLLS AYKNVIGARRASWRIISSIEQKEE +G +
Sbjct: 3 EYMERVARAAGGASGGEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAH 62
Query: 407 LNMIRAYRSQVEKELRDICSDILGVLXQVPHPQLTDRRIKSFLLQNEGRLPPVPGRVRD- 583
IR+YR ++E EL IC IL +L P K F L+ +G +
Sbjct: 63 AATIRSYRGKIEAELARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSG 122
Query: 584 RQRPQGGCRELAGRVQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNSPDRACRLAK 763
+R Q E LNSPDRAC LAK
Sbjct: 123 DERKQAA--ESTMNAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAK 180
Query: 764 AAFDDAIAELDTLSEESYKDSTXIMQ 841
AFD+AI+ELD+L EESYKDST IMQ
Sbjct: 181 QAFDEAISELDSLGEESYKDSTLIMQ 206
Score = 77.0 bits (181), Expect = 2e-14
Identities = 33/49 (67%), Positives = 43/49 (87%)
Frame = +3
Query: 492 YLIPSSQTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAA 638
+L+PS+ ESKVFY KMKGDYHRYLAEF +G++RK+AAE+++ AYKAA
Sbjct: 91 HLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMNAYKAA 139
Score = 53.2 bits (122), Expect = 3e-07
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +1
Query: 646 IAMTELXPTHPIRLGLALNFSVFYYEI 726
IA+ +L PTHPIRLGLALNFSVFYYEI
Sbjct: 142 IALADLAPTHPIRLGLALNFSVFYYEI 168
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 100 bits (239), Expect = 2e-21
Identities = 54/107 (50%), Positives = 73/107 (68%)
Frame = +2
Query: 164 MSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSFAYKNVIGARR 343
M ERE V AKLAEQAERYD+MVE MK +A +V +++ EER L S +K IGARR
Sbjct: 1 MKEREKVVRLAKLAEQAERYDDMVEFMKTLARMDV---DMSAEERLLFSVGFKKTIGARR 57
Query: 344 ASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVL 484
ASWRI+ S+EQK T G + + I Y+ +VE ELR +C+++L ++
Sbjct: 58 ASWRILESLEQK-VTAGDQPGVT-INGYKKKVEDELRAVCNEVLSII 102
Score = 67.7 bits (158), Expect = 1e-11
Identities = 27/48 (56%), Positives = 40/48 (83%)
Frame = +3
Query: 492 YLIPSSQTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKA 635
+ +P + +GE+ VF+YKMKGDY+RYLAEF+TG ++K A + SL+AY+A
Sbjct: 105 HCLPLANSGENVVFFYKMKGDYYRYLAEFSTGTEKKAATDQSLMAYQA 152
Score = 44.4 bits (100), Expect = 1e-04
Identities = 19/38 (50%), Positives = 28/38 (73%)
Frame = +2
Query: 728 LNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTXIMQ 841
+NSP+RA ++AK A D+A AE+++ E YKDS +MQ
Sbjct: 165 MNSPERASQVAKQALDEATAEINSAGVEGYKDSMLMMQ 202
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 88.6 bits (210), Expect = 6e-18
Identities = 46/85 (54%), Positives = 57/85 (67%)
Frame = +2
Query: 230 MVEAMKNVASRNVSDNELTVEERNLLSFAYKNVIGARRASWRIISSIEQKEETKGAEDKL 409
MVEAM +VA D LT EERNLLS YKN+IGA+RA+ RII SIE KEETKG E +
Sbjct: 1 MVEAMNSVAKL---DEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHV 57
Query: 410 NMIRAYRSQVEKELRDICSDILGVL 484
YR +VE E+ IC D++ ++
Sbjct: 58 RQTAEYRRKVEAEMDKICCDVINII 82
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/38 (73%), Positives = 35/38 (92%)
Frame = +2
Query: 728 LNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTXIMQ 841
+NSPD+AC+LAK AFD+A+AEL +LSEE+YKDST IMQ
Sbjct: 176 MNSPDKACQLAKNAFDEAVAELPSLSEENYKDSTLIMQ 213
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +3
Query: 546 KGDYHRYLAEFATGNDRKEAAENSLVAYKA 635
KGDY+RYLAEF TG ++ E +E SL AY+A
Sbjct: 85 KGDYYRYLAEFKTGTEKIEVSELSLNAYEA 114
Score = 43.2 bits (97), Expect = 3e-04
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = +1
Query: 649 AMTELXPTHPIRLGLALNFSVFYYEI 726
A T+L PT PIRLGLALN SVFY EI
Sbjct: 150 AQTDLTPTDPIRLGLALNISVFYCEI 175
>03_05_0469 +
24640925-24641081,24641292-24641644,24641870-24642043,
24642382-24642506,24643011-24643059,24643741-24643899,
24644037-24644219
Length = 399
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 260 RNVSDN-ELTVEERNLLSFAYKNVIGA-RRASWRIISSIE-QKEETKGAEDKLNMIRAYR 430
R +SD E +E+ N + AY+ + + ++ I+S + QKE K E++ ++A
Sbjct: 181 RLLSDKMEKEIEDVNTDNKAYEACLQRLEQETYNILSETDFQKERQKVIEEEEKKLKAAI 240
Query: 431 SQVEKELRDICSDI 472
+ EK+ +ICS++
Sbjct: 241 EEAEKQYSEICSEM 254
>08_02_0839 + 21693348-21694853
Length = 501
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 149 HLSSTMSEREDNVYKAKLAEQAERYDEMVEAMK 247
HLS M + E+ + K AE AE+ DE+V ++K
Sbjct: 235 HLSLVMEQEEEAEPEQKHAEAAEKADEVVVSVK 267
>03_02_0834 -
11630288-11630500,11630531-11630623,11630844-11631050,
11631301-11633089,11633817-11634145
Length = 876
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 170 EREDNVYKAKLAEQAERYDEMVEAMKNVASRNVS-DNELTVEERNLLSFAYK 322
+R N + KLAE + E ++ +A +NVS E+T+ E N + + K
Sbjct: 396 DRRSNDWSVKLAEFQSEEQRLRERVRELAEQNVSFQREVTLLESNRIDVSNK 447
>07_03_0941 -
22763733-22763970,22764077-22764213,22764282-22764470,
22765238-22765756,22766319-22767357,22767665-22767759,
22768253-22768357
Length = 773
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 422 AYRSQVEKELRDICSDIL 475
AY+SQ EK +R ICS++L
Sbjct: 28 AYQSQTEKGIRKICSELL 45
>07_01_0751 - 5777017-5778032,5779718-5780111,5780830-5781936
Length = 838
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 238 GDEECSITQRVRQ*ADSGGEEPAVXRLQERDRRPPRLLA 354
GDE I + A EE A RL+ R+ RPP ++A
Sbjct: 256 GDELDEIARACEAAAALSAEESAYRRLRRRESRPPLVIA 294
>07_01_0070 +
515247-515397,516198-516265,516360-518456,518750-518900,
519883-520638,520990-521164,521303-521387
Length = 1160
Score = 28.3 bits (60), Expect = 8.6
Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 8/119 (6%)
Frame = +2
Query: 269 SDNELTVEERNLLSFAYKNVIGAR----RASWR----IISSIEQKEETKGAEDKLNMIRA 424
S NE T ++ L KNV ++ A W+ I+ + + +KGA K +
Sbjct: 371 SQNEATPRQQRNLDATIKNVPNSKFPVETAPWKQQEKIVLPRKLPKGSKGAHGKEQHAAS 430
Query: 425 YRSQVEKELRDICSDILGVLXQVPHPQLTDRRIKSFLLQNEGRLPPVPGRVRDRQRPQG 601
S++EK L+D+ + Q+ D LLQN+ R P ++ D G
Sbjct: 431 VYSEIEKRLKDLDFQQSNKDLRA-LKQILDSMQAKGLLQNKKREEPSMPKIYDGDHDNG 488
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 28.3 bits (60), Expect = 8.6
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 3/115 (2%)
Frame = +2
Query: 293 ERNLLSFAYKNVIGARRASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKE-LRDICSD 469
++++L A K V+ + ++ + Q+E TK N+I A + EKE L + +
Sbjct: 368 DKSVLGTAAKVVLN-KESTTIVGDGSTQEEVTKRVAQIKNLIEAAEQEYEKEKLNERIAK 426
Query: 470 ILGVLXQVPHPQLTDRRIKSFLLQNEGRLPPVPGRVRDRQRPQGGCR--ELAGRV 628
+ G + + T+ +K L+ E L V + GGC LA RV
Sbjct: 427 LAGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLAARV 481
>01_05_0297 -
20578031-20578080,20578162-20578236,20578317-20578416,
20578476-20578535,20578833-20578907,20578989-20579069,
20579596-20579665,20579769-20579833,20580008-20580116,
20580812-20580876,20580964-20581023,20582008-20582134,
20582215-20582315,20583209-20583316,20583429-20583464,
20583569-20583714,20585555-20585564
Length = 445
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +2
Query: 395 AEDKLNMIRAYRSQVEKELRDICSDILGVLXQVPHPQLTDRRIKSFLLQNEGR 553
+ K ++R +E ++ D CSD L Q P L D F L+ +G+
Sbjct: 291 SNQKAKILRKVDYPLELDVYDFCSDELKQKLQAPRQMLRDAENAKFGLKAQGK 343
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,714,228
Number of Sequences: 37544
Number of extensions: 381516
Number of successful extensions: 1193
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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