Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_P22
         (873 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   6.4  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   6.4  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   8.5  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   8.5  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
 Frame = +3

Query: 141 YTGLLITKKNTPSEA--YFQSD 200
           YTG  +TK N P +   YF  D
Sbjct: 204 YTGWYLTKHNVPEQRLNYFTED 225


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
 Frame = +3

Query: 141 YTGLLITKKNTPSEA--YFQSD 200
           YTG  +TK N P +   YF  D
Sbjct: 204 YTGWYLTKHNVPEQRLNYFTED 225


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -1

Query: 678 HRKKIVAFLAKDKHNSMNDGIVLT 607
           H+KK+   LAK++  S   GI+++
Sbjct: 356 HQKKLRFHLAKERKASTTLGIIMS 379


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 95  CLFFIATVLVCVNAEVYRSPDYEEEYP 175
           CL   A+ + CV+A  Y++    + YP
Sbjct: 11  CLLLAASPIDCVDANWYKNALVYQIYP 37


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 247,825
Number of Sequences: 438
Number of extensions: 5821
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)