Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_P20
(909 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0043 + 5242496-5242554,5242673-5242778,5243586-5243723,524... 93 3e-19
12_02_0012 - 12309332-12310228,12311087-12311669,12311945-123120... 91 1e-18
02_02_0482 - 10819562-10819813,10820773-10820952,10822073-108221... 91 1e-18
03_01_0114 + 912025-912308,912642-912805,912917-913080,913196-91... 30 2.2
05_06_0094 + 25477367-25477398,25477516-25477891,25478292-254783... 30 2.9
07_03_1240 + 25095472-25095942,25096021-25096314,25096563-250973... 29 3.9
06_02_0172 + 12594542-12596083 29 5.1
12_01_0357 + 2720860-2721066,2721169-2721384,2721481-2723608,272... 29 6.7
03_02_0381 + 7951360-7951509,7952125-7952169,7952625-7952744,795... 28 8.9
02_03_0344 + 17967687-17968309,17968402-17968744,17970285-179704... 28 8.9
>03_02_0043 +
5242496-5242554,5242673-5242778,5243586-5243723,
5243794-5243979,5244075-5244275,5244362-5244460
Length = 262
Score = 93.1 bits (221), Expect = 3e-19
Identities = 68/216 (31%), Positives = 110/216 (50%), Gaps = 1/216 (0%)
Frame = +3
Query: 147 PFPRXAWSXVXAPSXVXXAASRHHACQPXPGSRKLLRKGLQGSVFEVSLADLQADTDAXR 326
PF + W + APS G+ K+ +GL+ VFEVSLADLQ D D +
Sbjct: 23 PFAKKDWYDIKAPSVFNVRNIGKTLVSRTQGT-KIASEGLKHRVFEVSLADLQNDED--Q 79
Query: 327 SFRKFSLIAEXCART*CALQL-PRHGPHNRISSGGWLKNGRLSSKPTLM*RQPNGYVLRV 503
++RK L AE +++ S +K + + + + +GY+LR+
Sbjct: 80 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRS--LVKKWQTLIEAHVDVKTTDGYMLRL 137
Query: 504 FCIGFTNKDSLSQRKNVLRPAHSGQSNQKENV*NHYTRTSLTLNSGRW*TKLIPDSIAKD 683
FCIGFT + ++ A + +++ V + S + + +K IP+ I K+
Sbjct: 138 FCIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMANQAS-SCDLKELVSKFIPEVIGKE 196
Query: 684 IEKACHGIYPLRDVCIRKVKVLKXPRFEISKLMELH 791
IEKA I+PL++V +RKVK+LK P+F++ KLME+H
Sbjct: 197 IEKATSSIFPLQNVFVRKVKILKAPKFDLGKLMEVH 232
Score = 49.2 bits (112), Expect = 4e-06
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Frame = +2
Query: 365 KDVMCSATSTAWTSQPNKLRWMVKKWQTLIEANIDVKTTEWIRSTCLLHWFHQ*GLLEPT 544
K+V+ + ++T+ +KLR +VKKWQTLIEA++DVKTT+ F + P
Sbjct: 94 KNVLTNFWGMSFTT--DKLRSLVKKWQTLIEAHVDVKTTDGYMLRLFCIGFTK---RRPN 148
Query: 545 QERATPSTLRSE--QSERKCVKSLHANVTNSELREVVNK 655
Q + T S+ Q RK V+ + ++ +L+E+V+K
Sbjct: 149 QVKRTCYAQASQIRQIRRKMVEIMANQASSCDLKELVSK 187
Score = 44.4 bits (100), Expect = 1e-04
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Frame = +1
Query: 361 VQGRNVLCNFHGMDLTTE*AQVDG*K---MADSHRSQH*CEDNRMDTFYVSSALVSPIRT 531
VQG+NVL NF GM TT+ + K + ++H + + F + R
Sbjct: 91 VQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDGYMLRLFCIGFTK----RR 146
Query: 532 P*ANARTCYAQHTQVRAIRKKMCEIITRE 618
P RTCYAQ +Q+R IR+KM EI+ +
Sbjct: 147 PNQVKRTCYAQASQIRQIRRKMVEIMANQ 175
>12_02_0012 -
12309332-12310228,12311087-12311669,12311945-12312051,
12313190-12313237,12315139-12315216,12315300-12315500,
12315612-12315797,12315870-12316007,12318311-12318416,
12318529-12318587
Length = 800
Score = 91.1 bits (216), Expect = 1e-18
Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 1/216 (0%)
Frame = +3
Query: 147 PFPRXAWSXVXAPSXVXXAASRHHACQPXPGSRKLLRKGLQGSVFEVSLADLQADTDAXR 326
PF + W + APS G+ K+ +GL+ VFEVSLADLQ D D +
Sbjct: 23 PFAKKDWYDIKAPSVFNVRNVGKTLVSRTQGT-KIASEGLKHRVFEVSLADLQNDED--Q 79
Query: 327 SFRKFSLIAEXCART*CALQL-PRHGPHNRISSGGWLKNGRLSSKPTLM*RQPNGYVLRV 503
++RK L AE +++ S +K + + + + + Y+LR+
Sbjct: 80 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRS--LVKKWQTLIEAHVDVKTTDNYMLRL 137
Query: 504 FCIGFTNKDSLSQRKNVLRPAHSGQSNQKENV*NHYTRTSLTLNSGRW*TKLIPDSIAKD 683
FCIGFT + ++ A + +++ V + S + + +K IP+ I K+
Sbjct: 138 FCIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAS-SCDLKELVSKFIPEVIGKE 196
Query: 684 IEKACHGIYPLRDVCIRKVKVLKXPRFEISKLMELH 791
IEKA I+PL++V +RKVK+LK P+F++ KLME+H
Sbjct: 197 IEKATSSIFPLQNVFVRKVKILKAPKFDLGKLMEVH 232
Score = 48.4 bits (110), Expect = 8e-06
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 4/101 (3%)
Frame = +2
Query: 365 KDVMCSATSTAWTSQPNKLRWMVKKWQTLIEANIDVKTTE--WIRSTCLLHWFHQ*GLLE 538
K+V+ + ++T+ +KLR +VKKWQTLIEA++DVKTT+ +R C+ F +
Sbjct: 94 KNVLTNFWGMSFTT--DKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFCI--GFTK---RR 146
Query: 539 PTQERATPSTLRSE--QSERKCVKSLHANVTNSELREVVNK 655
P Q + T S+ Q RK V+ + ++ +L+E+V+K
Sbjct: 147 PNQVKRTCYAQASQIRQIRRKMVEIMVNQASSCDLKELVSK 187
Score = 45.6 bits (103), Expect = 5e-05
Identities = 43/145 (29%), Positives = 61/145 (42%), Gaps = 3/145 (2%)
Frame = +1
Query: 193 FXXRQVGTTLVNRXQGXANCFGKACRAAFSKFPWLIXKLTLTRXGLSANSA*SPKXVQGR 372
F R VG TLV+R QG F + L + VQG+
Sbjct: 38 FNVRNVGKTLVSRTQGTKIASEGLKHRVFEVS---LADLQNDEDQAYRKIRLRAEDVQGK 94
Query: 373 NVLCNFHGMDLTTE*AQVDG*K---MADSHRSQH*CEDNRMDTFYVSSALVSPIRTP*AN 543
NVL NF GM TT+ + K + ++H ++ + F + R P
Sbjct: 95 NVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFCIGFTK----RRPNQV 150
Query: 544 ARTCYAQHTQVRAIRKKMCEIITRE 618
RTCYAQ +Q+R IR+KM EI+ +
Sbjct: 151 KRTCYAQASQIRQIRRKMVEIMVNQ 175
>02_02_0482 -
10819562-10819813,10820773-10820952,10822073-10822150,
10823056-10823256,10823365-10823550,10823646-10823783,
10824396-10824501,10824634-10824692
Length = 399
Score = 91.1 bits (216), Expect = 1e-18
Identities = 68/216 (31%), Positives = 110/216 (50%), Gaps = 1/216 (0%)
Frame = +3
Query: 147 PFPRXAWSXVXAPSXVXXAASRHHACQPXPGSRKLLRKGLQGSVFEVSLADLQADTDAXR 326
PF + W + AP+ G+ K+ +GL+ VFEVSLADLQ D D +
Sbjct: 23 PFSKKDWYDIKAPTVFSVRNIGKTLVSRTQGT-KIASEGLKHRVFEVSLADLQNDED--Q 79
Query: 327 SFRKFSLIAEXC-ART*CALQLPRHGPHNRISSGGWLKNGRLSSKPTLM*RQPNGYVLRV 503
++RK L AE R +++ S +K + + + + + Y+LR+
Sbjct: 80 AYRKVRLRAEDVQGRNVLTNFWGMSFTTDKLRS--LVKKWQTLIEAHVDVKTTDNYMLRL 137
Query: 504 FCIGFTNKDSLSQRKNVLRPAHSGQSNQKENV*NHYTRTSLTLNSGRW*TKLIPDSIAKD 683
FCIGFT + ++ A + +++ V + S T + +K IP+ I K+
Sbjct: 138 FCIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMANQAS-TCDLKELVSKFIPEVIGKE 196
Query: 684 IEKACHGIYPLRDVCIRKVKVLKXPRFEISKLMELH 791
IEK+ I+PL++V IRKVK+LK P+F++ KLME+H
Sbjct: 197 IEKSTSSIFPLQNVFIRKVKILKAPKFDLGKLMEVH 232
Score = 47.6 bits (108), Expect = 1e-05
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Frame = +2
Query: 413 NKLRWMVKKWQTLIEANIDVKTTE--WIRSTCLLHWFHQ*GLLEPTQERATPSTLRSE-- 580
+KLR +VKKWQTLIEA++DVKTT+ +R C+ F + P Q + T S+
Sbjct: 108 DKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFCI--GFTK---RRPNQVKRTCYAQASQIR 162
Query: 581 QSERKCVKSLHANVTNSELREVVNK 655
Q RK V+ + + +L+E+V+K
Sbjct: 163 QIRRKMVEIMANQASTCDLKELVSK 187
Score = 46.4 bits (105), Expect = 3e-05
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Frame = +1
Query: 361 VQGRNVLCNFHGMDLTTE*AQVDG*K---MADSHRSQH*CEDNRMDTFYVSSALVSPIRT 531
VQGRNVL NF GM TT+ + K + ++H ++ + F + R
Sbjct: 91 VQGRNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFCIGFTK----RR 146
Query: 532 P*ANARTCYAQHTQVRAIRKKMCEIITRE 618
P RTCYAQ +Q+R IR+KM EI+ +
Sbjct: 147 PNQVKRTCYAQASQIRQIRRKMVEIMANQ 175
>03_01_0114 +
912025-912308,912642-912805,912917-913080,913196-913449,
914060-914171
Length = 325
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 611 HANVTNSELREVVNKVDS*LHCQ--GHRESLPWHLPS 715
HA+V R+ V KV S L+ Q G RE +PW +PS
Sbjct: 5 HADVEKGARRKEVGKVPSPLYPQHEGEREWVPWIVPS 41
>05_06_0094 +
25477367-25477398,25477516-25477891,25478292-25478315,
25479069-25481828
Length = 1063
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/39 (43%), Positives = 18/39 (46%)
Frame = -1
Query: 819 FPPCFHRFRREVPSTSRSRNGASSTLSPFGCKHRAEGRC 703
F FH R E PST R+ NG S F AE RC
Sbjct: 686 FSQLFHGTRVEPPSTLRNSNGGVEHPSRFSSVPEAELRC 724
>07_03_1240 +
25095472-25095942,25096021-25096314,25096563-25097383,
25097466-25097636,25097716-25098016
Length = 685
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 559 RSTFLRWLKESLLVKPMQKTRRTYPFGCLHI 467
R TF++W KE ++V P + T T P L I
Sbjct: 329 RKTFIQWPKEDIVVSPSRPTELTPPKSKLSI 359
>06_02_0172 + 12594542-12596083
Length = 513
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 434 KKWQTLIEANIDVKTTEWIRSTCLL-HWFHQ*GLLE 538
K+W L+E ID TT+ IRS+ +L H+ + G ++
Sbjct: 251 KRWDQLLEKLIDDHTTKHIRSSSMLNHYDEEAGFID 286
>12_01_0357 +
2720860-2721066,2721169-2721384,2721481-2723608,
2723699-2724124,2724242-2724546,2724660-2724823,
2724899-2724980
Length = 1175
Score = 28.7 bits (61), Expect = 6.7
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 623 TNSELREVVNKVDS*LHCQGHRESLPWHLPSARCL 727
+N L E + KV +HCQ H+ WH + C+
Sbjct: 74 SNKPLAETIGKVT--VHCQYHKSGCQWHGNLSDCI 106
>03_02_0381 +
7951360-7951509,7952125-7952169,7952625-7952744,
7952823-7952930,7953256-7953363,7953635-7953808,
7954054-7954191,7954643-7954750,7954866-7954973,
7955086-7955234,7955816-7955969,7956143-7956303,
7956391-7956597,7956703-7956886,7956974-7957057,
7957146-7957345,7957476-7957535,7957631-7957835
Length = 820
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -3
Query: 505 KTRRTYPFGCLHINVGFDESLPFFN 431
K RRTYPFG + G LPF N
Sbjct: 517 KVRRTYPFGVDPVWHGSRSELPFLN 541
>02_03_0344 +
17967687-17968309,17968402-17968744,17970285-17970410,
17970458-17970642,17970721-17970973
Length = 509
Score = 28.3 bits (60), Expect = 8.9
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = -1
Query: 576 DLSVLGVARSCVGSRSPYW*NQCRRHVERIHSVVFTSMLASMRVCHFLTIHL 421
D S +G A S PYW RHV R V T +L++ RV HF +H+
Sbjct: 117 DWSTMGTA-----SYGPYW-----RHVRR---VAVTEILSARRVQHFADVHV 155
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,592,912
Number of Sequences: 37544
Number of extensions: 425548
Number of successful extensions: 1187
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1181
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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