Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_P20
         (909 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z32681-6|CAA83605.1|  257|Caenorhabditis elegans Hypothetical pr...    98   9e-21
Z81538-1|CAB04383.1|  569|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z81035-3|CAB02732.1|  333|Caenorhabditis elegans Hypothetical pr...    30   2.6  

>Z32681-6|CAA83605.1|  257|Caenorhabditis elegans Hypothetical
           protein F56F3.5 protein.
          Length = 257

 Score = 97.9 bits (233), Expect = 9e-21
 Identities = 71/216 (32%), Positives = 103/216 (47%), Gaps = 1/216 (0%)
 Frame = +3

Query: 147 PFPRXAWSXVXAPSXVXXAASRHHACQPXPGSRKLLRKGLQGSVFEVSLADLQADTDAXR 326
           PF R  W  + AP+                G+ K+  +GL+G VFEVSL DL    ++  
Sbjct: 22  PFSRKEWYDIKAPNMFNTRQVGKTLINRTQGT-KIASEGLKGRVFEVSLGDLN---NSEA 77

Query: 327 SFRKFSLIAEXCART*CALQLPRHG-PHNRISSGGWLKNGRLSSKPTLM*RQPNGYVLRV 503
            FRKF LIAE                 H+++ S   +K      +     +  +GY LRV
Sbjct: 78  DFRKFKLIAEDVQGKNVLTNFHAMSMTHDKLCS--IVKKWHTLIEANTAVKTTDGYTLRV 135

Query: 504 FCIGFTNKDSLSQRKNVLRPAHSGQSNQKENV*NHYTRTSLTLNSGRW*TKLIPDSIAKD 683
           F I FT K S++Q K       S     +  +     +     +     +KLIPDSI KD
Sbjct: 136 FVIAFTKK-SVNQVKKTSYTKTSKIRKIRSEMIGCIEKEVTGCDLKEVVSKLIPDSIGKD 194

Query: 684 IEKACHGIYPLRDVCIRKVKVLKXPRFEISKLMELH 791
           IEK C  +YPL++V IRKVK++K P+ ++ +L +LH
Sbjct: 195 IEKTCSKLYPLQEVYIRKVKIIKRPKVDLGRLHDLH 230


>Z81538-1|CAB04383.1|  569|Caenorhabditis elegans Hypothetical
           protein F45H10.1 protein.
          Length = 569

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
 Frame = -1

Query: 909 FFFFHCFHYLINT-----LLNGRLXAX--RPFRLVSGFPPCFHRFRREVPSTSR 769
           FFFFHC  +L        L +GR      RPF L+  FPP F  F +  P   R
Sbjct: 502 FFFFHCNFFLTRDEEKWFLGHGRRADKFQRPFILLCCFPPVFFCFSQLFPMLKR 555


>Z81035-3|CAB02732.1|  333|Caenorhabditis elegans Hypothetical
           protein C15H11.4 protein.
          Length = 333

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = +2

Query: 464 IDVKTTEWIRSTCLLHWFHQ*GLLEPTQERATPSTLRSEQSERKCVKSLHANVTNSEL 637
           I++ T +  +S  ++  + Q  L      RA    LR + +E   V SLH  V N+EL
Sbjct: 193 INLATVDDKKSFGMMKSYRQSKLANVMHARALTKELRKDGAEHVTVNSLHPGVVNTEL 250


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,571,519
Number of Sequences: 27780
Number of extensions: 340604
Number of successful extensions: 825
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)