Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_P18
         (884 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0465 + 18465966-18466206,18467424-18467443,18467444-184677...   208   3e-54
10_08_0955 + 21789616-21789778,21791622-21791688,21792285-217923...   107   9e-24
02_01_0139 - 1008675-1008752,1008828-1008905,1009176-1009227,100...    28   8.7  

>07_03_0465 +
           18465966-18466206,18467424-18467443,18467444-18467729,
           18468557-18468666,18468744-18468909,18469303-18469433
          Length = 317

 Score =  208 bits (509), Expect = 3e-54
 Identities = 88/173 (50%), Positives = 124/173 (71%)
 Frame = +3

Query: 156 FSCEVDEDYINDKFNLTGLNEQVPHYREALDMXXXXXXXXXXXXXXXESDLVEQASEILY 335
           F CEVD+DYI D FNL GL+ QVP+Y  ALD+               +++LVE A+E+LY
Sbjct: 143 FFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDMFTEEQNELVESAAEMLY 202

Query: 336 GLIHARYILTNRGISQMLDKFQSGDFGYCPRVYCECQPMLPIGLSDVPAEAMVKLYCPRC 515
           GLIHARYILT++G++ ML+K+++ DFG CPRVYC  QP LP+G SD+   + VK+YCP+C
Sbjct: 203 GLIHARYILTSKGLAAMLEKYKNYDFGRCPRVYCCGQPCLPVGQSDIHRSSTVKIYCPKC 262

Query: 516 MDVYTPKSSRHHHTDGAYFGTGFPHMVFMVHPDKRPKRPASQFVPRLYGFKIH 674
            D+Y P+S    + DGAYFGT FPH+  M +   +P++P+ ++VPR++GFK+H
Sbjct: 263 EDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYEHLKPQKPSQRYVPRVFGFKLH 315



 Score = 40.3 bits (90), Expect = 0.002
 Identities = 14/21 (66%), Positives = 18/21 (85%)
 Frame = +2

Query: 98  SSSEEVSWIAWFCTLRGNEFF 160
           S  E+ SWI+W+C+LRGNEFF
Sbjct: 124 SDGEDHSWISWYCSLRGNEFF 144


>10_08_0955 +
           21789616-21789778,21791622-21791688,21792285-21792346,
           21792508-21792729,21792993-21793102,21793195-21793236,
           21793271-21793303
          Length = 232

 Score =  107 bits (258), Expect = 9e-24
 Identities = 47/99 (47%), Positives = 66/99 (66%)
 Frame = +3

Query: 132 FARFEAMSFSCEVDEDYINDKFNLTGLNEQVPHYREALDMXXXXXXXXXXXXXXXESDLV 311
           F       F CE+D+DYI D FNL GL+ QVP+Y  ALD+               +++L+
Sbjct: 124 FCSLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNGDVFTEEQNELI 183

Query: 312 EQASEILYGLIHARYILTNRGISQMLDKFQSGDFGYCPR 428
           E ++E+LYGLIHARYILT++G++ ML+KF++ DFG CPR
Sbjct: 184 ESSAEMLYGLIHARYILTSKGLAAMLEKFKNYDFGRCPR 222



 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 15/21 (71%), Positives = 18/21 (85%)
 Frame = +2

Query: 98  SSSEEVSWIAWFCTLRGNEFF 160
           S  E+ SWI+WFC+LRGNEFF
Sbjct: 113 SEGEDTSWISWFCSLRGNEFF 133


>02_01_0139 -
           1008675-1008752,1008828-1008905,1009176-1009227,
           1009369-1009437,1009594-1009652,1009757-1009828,
           1009945-1010038,1010311-1010356,1010510-1010609,
           1010847-1011200,1011362-1011460,1011548-1011595,
           1011679-1011816
          Length = 428

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/19 (68%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
 Frame = -3

Query: 312 PPDQIHL-DCLQCHHLAPD 259
           PP+  HL D LQ HHLAPD
Sbjct: 14  PPEVAHLVDQLQRHHLAPD 32


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,720,469
Number of Sequences: 37544
Number of extensions: 563275
Number of successful extensions: 1316
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1316
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)