Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_P18
         (884 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75713-9|CAB00053.1|  235|Caenorhabditis elegans Hypothetical pr...   295   4e-80
Z75713-8|CAB00056.1|  234|Caenorhabditis elegans Hypothetical pr...   291   6e-79
M73827-1|AAA27983.1|  234|Caenorhabditis elegans casein kinase I...   287   7e-78

>Z75713-9|CAB00053.1|  235|Caenorhabditis elegans Hypothetical
           protein T01G9.6b protein.
          Length = 235

 Score =  295 bits (723), Expect = 4e-80
 Identities = 131/189 (69%), Positives = 150/189 (79%)
 Frame = +3

Query: 132 FARFEAMSFSCEVDEDYINDKFNLTGLNEQVPHYREALDMXXXXXXXXXXXXXXXESDLV 311
           F       F CEVDE+YI D+FNLTGLNEQVP YR+ALDM                +DLV
Sbjct: 13  FCGLRGNEFFCEVDEEYIQDRFNLTGLNEQVPKYRQALDMILDLEPEDDIEDNATNTDLV 72

Query: 312 EQASEILYGLIHARYILTNRGISQMLDKFQSGDFGYCPRVYCECQPMLPIGLSDVPAEAM 491
           EQA+E+LYGLIHARYILTNRGISQM++K++  DFG CPRVYCE QPMLPIGLSDVP EAM
Sbjct: 73  EQAAEMLYGLIHARYILTNRGISQMVEKWRDHDFGVCPRVYCENQPMLPIGLSDVPGEAM 132

Query: 492 VKLYCPRCMDVYTPKSSRHHHTDGAYFGTGFPHMVFMVHPDKRPKRPASQFVPRLYGFKI 671
           VKLYCPRC DV+ P+SSRH HTDG+YFGTGFPHM+F VHPD RP+RP +QFVP+LYGFKI
Sbjct: 133 VKLYCPRCNDVFVPRSSRHQHTDGSYFGTGFPHMLFFVHPDLRPRRPVTQFVPKLYGFKI 192

Query: 672 HPLAYQIQQ 698
           HP+AY  Q+
Sbjct: 193 HPVAYGGQE 201



 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 20/22 (90%), Positives = 20/22 (90%)
 Frame = +2

Query: 95  MSSSEEVSWIAWFCTLRGNEFF 160
           MSSSEEVSWI WFC LRGNEFF
Sbjct: 1   MSSSEEVSWITWFCGLRGNEFF 22


>Z75713-8|CAB00056.1|  234|Caenorhabditis elegans Hypothetical
           protein T01G9.6a protein.
          Length = 234

 Score =  291 bits (713), Expect = 6e-79
 Identities = 131/189 (69%), Positives = 150/189 (79%)
 Frame = +3

Query: 132 FARFEAMSFSCEVDEDYINDKFNLTGLNEQVPHYREALDMXXXXXXXXXXXXXXXESDLV 311
           F       F CEVDE+YI D+FNLTGLNEQVP YR+ALDM                +DLV
Sbjct: 13  FCGLRGNEFFCEVDEEYIQDRFNLTGLNEQVPKYRQALDMILDLEPDDIEDNAT-NTDLV 71

Query: 312 EQASEILYGLIHARYILTNRGISQMLDKFQSGDFGYCPRVYCECQPMLPIGLSDVPAEAM 491
           EQA+E+LYGLIHARYILTNRGISQM++K++  DFG CPRVYCE QPMLPIGLSDVP EAM
Sbjct: 72  EQAAEMLYGLIHARYILTNRGISQMVEKWRDHDFGVCPRVYCENQPMLPIGLSDVPGEAM 131

Query: 492 VKLYCPRCMDVYTPKSSRHHHTDGAYFGTGFPHMVFMVHPDKRPKRPASQFVPRLYGFKI 671
           VKLYCPRC DV+ P+SSRH HTDG+YFGTGFPHM+F VHPD RP+RP +QFVP+LYGFKI
Sbjct: 132 VKLYCPRCNDVFVPRSSRHQHTDGSYFGTGFPHMLFFVHPDLRPRRPVTQFVPKLYGFKI 191

Query: 672 HPLAYQIQQ 698
           HP+AY  Q+
Sbjct: 192 HPVAYGGQE 200



 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 20/22 (90%), Positives = 20/22 (90%)
 Frame = +2

Query: 95  MSSSEEVSWIAWFCTLRGNEFF 160
           MSSSEEVSWI WFC LRGNEFF
Sbjct: 1   MSSSEEVSWITWFCGLRGNEFF 22


>M73827-1|AAA27983.1|  234|Caenorhabditis elegans casein kinase II
           beta subunit protein.
          Length = 234

 Score =  287 bits (704), Expect = 7e-78
 Identities = 130/189 (68%), Positives = 149/189 (78%)
 Frame = +3

Query: 132 FARFEAMSFSCEVDEDYINDKFNLTGLNEQVPHYREALDMXXXXXXXXXXXXXXXESDLV 311
           F       F CEVDE+YI D+FNLTGLNEQVP YR+ALDM                +DLV
Sbjct: 13  FCGLRGNEFFCEVDEEYIQDRFNLTGLNEQVPKYRQALDMILDLEPDDIEDNAT-NTDLV 71

Query: 312 EQASEILYGLIHARYILTNRGISQMLDKFQSGDFGYCPRVYCECQPMLPIGLSDVPAEAM 491
           EQA+E+LYGLIHARYILTNRGISQM++K++  DFG CPRVYCE QPMLPIGLSDVP EAM
Sbjct: 72  EQAAEMLYGLIHARYILTNRGISQMVEKWRDHDFGVCPRVYCENQPMLPIGLSDVPGEAM 131

Query: 492 VKLYCPRCMDVYTPKSSRHHHTDGAYFGTGFPHMVFMVHPDKRPKRPASQFVPRLYGFKI 671
           VKLYCPRC  V+ P+SSRH HTDG+YFGTGFPHM+F VHPD RP+RP +QFVP+LYGFKI
Sbjct: 132 VKLYCPRCNMVFVPRSSRHQHTDGSYFGTGFPHMLFFVHPDLRPRRPVTQFVPKLYGFKI 191

Query: 672 HPLAYQIQQ 698
           HP+AY  Q+
Sbjct: 192 HPVAYGGQE 200



 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 20/22 (90%), Positives = 20/22 (90%)
 Frame = +2

Query: 95  MSSSEEVSWIAWFCTLRGNEFF 160
           MSSSEEVSWI WFC LRGNEFF
Sbjct: 1   MSSSEEVSWITWFCGLRGNEFF 22


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,974,316
Number of Sequences: 27780
Number of extensions: 435113
Number of successful extensions: 1078
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)